Contig Data
morexGenes
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Map Locations of contig_139647 (3381 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_139647

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7606 2 761 bp MLOC_7606.1 Available Available LOC_Os03g36630.1, FRAME:+1, EVALUE:9e-53, 13103.m04000 protein expressed protein





CDS Structure of MLOC_7606






Contig Sequence (3381 bp)

>contig_139647 3381 assembly3_WGSMorex_rbca.fasta
GCGATTGGGGCGGTGCGAGCGACGAGGGGCAGGGCGGCGGCCACTGGACGGGAGACTTCC
GCGGGCCTAACCAGAATAAGTCTCAATAAATTTCTATTAGAGAGTCTTATTTGATAAGTC
CCAAATAACCATAATAAGTCTCAATAAGCCCTTTGTGTTTGATTTAGGTGGGACTTATAG
GGACTTTTTTAAGTCCCAAAACCAATAAATCCGTGAAAACAAACACCCTCTTATTTTACC
GCCAGACACGTACGGCCCACTCATTTCGCTTTGGACAACACAGTTGTTAGCGGGCCGACC
GCAATGGCAACGCCGCCGCCGCCAGCATTCGTGTACCGGATCAGCACGGGGAGCGAGTGG
GCGGAGCTCCAGCGCACCGGCTGCACCCTCGGCGGCGACCTCGACCGCTCCACCAGCTGC
TTCCACCTCAGCGACCACGCCCAGGTACCCCCGGCTAATTTGATTCCTTCCGTCTTGCAT
CCCCTTTCTCTCCAGATCTCTCGGCTTCGTCAGATCTCCGCTACAGATATTGTTCTATCT
GACTGATCTGTCAGTAGATTTCTCCCTGTACTGCTTAAATTGGACTTCCGGCTTAACCAT
GGATGTTGTCGGGAGGTGCCATTTCCTGTATGATTCCGTTGATCTGAGATCGAGAACCCT
TGATTTCCTTGCCTGGGTGTCTTGACAGAACTTTGGGTTTCTTAGCCTCGTCGATGTTTG
GGGCCTATTGCTCTGAGTATGCCCAATAGCTCATACTAGATGTCTTTTCTGATTGACTCT
TTCAGTTTATATAGGTTGGTATTAGTAAATTGTAATGATCCTTAATATACTACTCCATTC
ATTCCTAAATATAAGACCTTTTAGAGATTTCGATACGGACTACATACGGAGCAAAATGTG
TGAATCGACGCTCTAAAATACGTCTATATACATCCATGTGCAGTTCATATCGAGATCTCT
AAAAAGGCTTAAACGGAGGGAGTAGCAAGCAATTGAAATTTATGGAACGCGATGCAGAAT
GCTGCTATTGAAAAGAAATGTGACATTACAACATATTATAGCAAAAGAAAAATCAGATTG
ATTCATAAATTAAAATAGGAAACGATGCGTCCTAGGCTGTTTTTTCTAATCGGGGATAAG
AAGGTAGGCCTCAGTCTACCATATATATATTCCAAAGAGACCAGAGTCTGGGGTTCAACA
AAGCAACATAAGAAAACGCTAGAAAACAGAAGGAAAAAGGAAAAAGGTTCAGGAATGGTT
CATATGAGTAGCATGTAGAAGATAGTAGTACAGAGCAGTTTGCCATTTAATAACCATCCC
AATCTCTGACCAGTCTTGGAATTGTGGTCCGCTACTTGAATGTCGCAGATAATTTGGCGG
AGGCTATCTAGTTCAGCAGCAGCACTTGTGGACAGGTTAGGGTGCAGCTTAATGTACTGA
TCCCCAATAAACTGCGAGGCAACCGAACAAAGCGATTGATGGCAACAGAAAAACGGGATG
GAAACAAGAGCAAACCACCCAGCTGAACCCCACTGATCAGTGGCCATCTCCCATTGAGAA
TGCGCTAGCATGCTAGACCAACTGGATAAAAGGGCCGTCTCCCATTCACTTCCTTGAACT
GTCACGCATGTTCAGGTGTTGTAATATCTGTTGAGCACTGACTTGTACTGTACCAGCTTC
AATCTAATCAGTGTTATGCCTGTTCTAGGAGGCTATCTCAAATTTTATTTTGTTACATAT
CATCCCTGTTATCTCAGTGGCGTGACTTGATCTGGAGTCTTTTCTTTTTCCAGAAAATAT
GGATCATATGCATTCATCCTTTTGTTTGTGTGTGTGTGCGTGTGTGTTGGTCCTTCTCAA
AAGATACGTTTATTTAATCCTTGACTTGGTGTAGGTGAAGATGACGCTAAAGAATTATTT
CCACAGGCAAAATGATCTATACCTGCTACAAATTGACACTGCCAAGGTATTGAACTTTAA
ACGTCCATTTTATTTCATCTCCGATCAGTTTGTATGTGTATTGAGAAAATTCCCAAATCT
TAGATTGCAGATGTGTTAGGACACATGCATAAAATTGCCAGTTTAGTGTTCTGTGTATTA
CCTCTATACATCTTTAAATCTAAATTTACTGTGGTTTCGTGTTATGTGTATTACCTCTAT
ACATGTGTTATAATTAGGACACATTCATAAAACTGCCACCTATTGATATGAAGACATTAT
ATGTACAATTTATTATTCCTATGTATTTTAGATTGCAGATGGCTTAATTTATGAGGCAGC
TGATGGTTGTAACTACTTTCCTGATCGGAGCTTTGCACCCCTTCAACTGAGTGCTGTTAT
CAAGGCTGAGAAAATAGAGCTGGCAAACAATGCTTTTACTTGCAGTCTACTTGATGGAGC
GGCCATCTAATTCTGATGTGTAACTGTAAGGTCTCACCGTTGGCCCTTGTTTTCATATAT
GTAAATTCCCTGCCAAAATCAAAGACAAGCTGTCCACATGCTTATGGTAAGGCTCTTGAT
CGTTCTCCAGTATTTCATTCCTGAATTGAAACCTTCCCGTCATACTTATGGTAAGGCTGG
CATCAGGTCTTGTGCATAGCTTTGCATGCATGATAAAGCTTATGGCTGAATCATAGGGGA
CGACACNNNNNNNTTCTCTATCTTCTGCAGTCACTGGGCGTTGAGTCTTACTCAACTTCA
CACCTTGCAATACAGGCAAGAACTCTTTCTTCGACTGATTTATTTTGAACTTCTTTAAAA
CTTTGTCAAGGTATGTGCTTTCTGAAAGTCTTATTAAGCGTCTTGATCTATCTTTATAGG
TCTTGATGCTTAATATGAAAGCAGCTTATCCTAGACCCTTTATTAAAAAAACTCTTATTC
AAATATTCTTTTATGCTTCCCAAAAATTATATATTGTTTTCAATCAGCAATATGTTATCC
ACATATAATATTAGAAATGTTATAGAGATCGCACTCACTTTCTTACAAATACAAGCTTCT
CCATAATTTGTGTAAACCAAACGCCTTGATCACCTCATCAAAGTGTTAATTTCAACTCTG
AGATGCTTTCACCAGTACATAAATGGATCGCTGGAGCTTGCATATTTTGTCAGCATTCTT
TGGATTGACAAAACCTTCCGATTGCATCATATATAACTCTTCCTTAAGGAAACCATTNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCAAATTTCATAATCGAAAAATGCAATTATTGCTGA
CATGGTTCTGATGGACTTAAGCATCGCTATGGGTGAAAATGTCTCATCGTAGTTAACTCC
TTNNNNNNNNNNNNNNNCCTTTGCCACGAGTCGAGCTTTATAGATGGTGATATTACCGTC
CGCGTCTGTCTTTTTCTTAAA