Contig Data
morexGenes
Links



Map Locations of contig_139624 (2272 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_139624

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7599 1 642 bp MLOC_7599.1 Available Available LOC_Os02g56870.1, FRAME:+2, EVALUE:7e-15, 13102.m06537 protein DEFL38 - Defensin and Defensin-like DEFL family





CDS Structure of MLOC_7599






Contig Sequence (2272 bp)

>contig_139624 2272 assembly3_WGSMorex_rbca.fasta
GGACGGATGCGGGGTCCGCTAGAGTTGCTCTTACTGTTGACGTAACTGAACTTCACACGG
TAATAGTTTTTCACGGTGAATTACCAAGTACACCTACATGCATCATGCATGTACCAAATT
CATGCCATGACAGCAATGTTCTGAAATTTTTTAGAAACACAATTTTTAACTCACAGTGTC
GGATAATACAGATGATGATTTTATTGTTCATCCAGCCTGTTGCTAGTATGGAGGAATTTT
CTACTGATGATCTTGTGCAGATGTTCTGAAAAGGCTTCTTTCCCGTAGCTGCAACATGTT
AAACTACCTGCAATACTAGATAACAACTGGAGTTTGGACCGACCCGAAATACCCATCGGG
CCAGCAAGACCATGGGCACTTAAGAAATGGATCGCCCTGCAGCCTCATAAATTGACCTTA
AGGCCATGAGGGCCGGGTCCGCCCGTTTCCATCCTGACTCTCTCCTTTGATGTTTAAAAG
GCCACCCGGCCAAAAACATAGAGACCAAGGCCATGTTTGGATTGTCATTTCCCCAACAAA
TACACCTGTAGGAAATACAGACCTCCTCGGTCGTTTACTTTTCAGCCGGAATCCTTCGCA
GTTCGGTACGTTACACACGTAAATTAAATACATTTATACTGGAATACCCTGATGCCAAGC
GCGGCCCAAGGTGTAGTCTGGTAACTGCACCCGTTAATTTAGGCATTAATATTGCTATAT
AATCATCATCTTTAAAATCTTGCAAATTTTCGCTAATGTGAACAAGATCGTGCAAATCAG
CTCGTAGAAGAATTCACTCGAAGGAAGATCCGTAGCAGAAAAAGGAAAGGAAAGGAAAAA
AAACCCTACATTTACACAAGCAAATCCTACATTTACCAAGCAAATCCCAAAAAAATCCTG
CATTTACACAAGCAAATCCTGTATTTCTGGATTTACCAAAGCTAATTGATAGCAGATCAA
CCAATTTTTCGCTCGCCTATATAATCATCACGTAGGTTCAGCCATATCACACACAATCGA
GCTAGCAGTAGAACTATTCTTCTCGACGATCATCATCAAGAAAATGGCCATGGCCAGTCG
TAGCACCGCTCTCCTCCTCCTCCTCGCGGCCGCTCTCCTGCTGGCCTCCTCCTGCCACGC
ATCGCCATCGCCACCGCACGCCATCTCAGGCACGTTCGTCCACAGCTACACACCATGGAC
AACGATACACGTAATACTACCACATTATATATTTTTTACGTTGTCCTGACGTGTGCAGCT
GTGGTCGTGCGTGCAGGCGGCGAGGGGAAGAAGAAGGCGGCGGACGTCGTGCCGGCGGAG
ACGGACCCGTCCAAGTGCGAGATGATGGTGCCGTGCAGCGAGGAGAAGTGCACCGAGCAC
TGCGTCCGCATCGGGCTGGGCAACGCGAGGGGCTTCTGCTCCTTCCACGACCTGCACTTC
GAGTGCTGCTGCCCCATACCGCCGCCGCCCCGCCGCCTCTCCTCCTCCGGCCGCCGGACC
GGCTCCGTTTAGCCAAAGCTAGCGGGCAGCTCTTCGTCGGTGCGTGTAAGAGATGGATCG
CTCGTCCATGTGTGTGTGCTTGCAAACGTGGTGTGGACAGAGATCGGAGTGCACGTACGC
GTCGATCAGTAATAAAGTTTGCTCTGGCCATTTGGGACAGTACACAATATATGTGTGTTG
TAGTGTTTCCAAAACAAACAAATAATAAAACTTTGACTGTTCTTGAGCTAAAAAATGAAT
TCTGAATGCCCCCATCAACTTTTATATACCTATGCCTCTACATCTATTTTTACCAACAAT
AATAATAAAAAAACTTATATATACCTATACCTCTACATCTATTTTTACCAATAATAAAAA
AATACGAGTTGCAGAGATCGAACAAATCTCACCCGTTCAATCTCGTCTATCTAACGGTCT
ACATTGCTCCATTGTTTACAGCTTAAAACGTGTTTAACATCCTAATTAATATCATGCCAA
TACTAAGAGGTAAATACATCGATAATGTTTGAAGGTTTCATGAATATTCACTTTAGTATC
TGAACTTAAAAAATACATGAAACTGATTCCATAACTTGACACGAACGTGTAAATACAGTT
CAAATCTCATCTATATATGTCGAGGCGTTCTAGCGTGCCATGTGGCCCGCTATGAGCGAC
TAGACATATGAAAATAGGTCAATACTGCGATTTTAACGAGTTCTCTATAACTGGACCCCA
AGGTTCATGAAACGTTTGGATCACAGCGGAACCCAAAATAAGTGACTAATAG