Contig Data
morexGenes
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Map Locations of contig_139582 (6325 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_139582

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7585 1 205 bp MLOC_7585.1 Available Available None
MLOC_7586 3 1873 bp MLOC_7586.1 Available Available LOC_Os05g46040.1, FRAME:-1, EVALUE:2e-166, 13105.m04901 protein protein phosphatase 2C, putative, expressed





CDS Structure of MLOC_7585






CDS Structure of MLOC_7586






Contig Sequence (6325 bp)

>contig_139582 6325 assembly3_WGSMorex_rbca.fasta
CCCCCCCGCGCCCCCTCCCCCCGCCGACGCCATGGCGGCCGGCAGGGCTAGGATTTTAGG
TGGGTTTCGAGGGAAAGGGGGTCGAGGAGGCGGTGGCGCCCAGGCTGCGAATTAGGGTTG
ATGATTGTGTTGCCGCCGATGGGAGGGGACGAGGGTGAGGGGGGATTAAATGAGTGGGGA
GGGCTTGGGCCTTGGGCCTTCTGGGTTTCGGCCCGCCGCTCGAAAAATAAAAGCCCGGCT
TTGCTGTCTGATATATATCCGTTCAAGAGAAAATCCGTTCCTTCTGCTTTTCAGGTGCTA
CTCCTTCACTATGCTCAAAAAATTCATAAAAACGTGCTCCTCCTTCGCGGAGCAGACAGC
AGAGGTTGCGGTGGCGCATGTAGGTCACGAGATGAGAAGGAACACGAGGAGGAAAGTGTG
ATAAAGAGTGAACACCAACAGCGACAAGAACGACGCCATGTAGGCAGCGGAACGACAGTG
GCAGCGGCGGCGCACCTAGGGCTCCCCTAACCATATTTTCTATTTTTAGTTACTGGTTTT
TTCCTCTCTTTTTCTTCCAATTCAAAAACTGTATGAATTTTTCAAAAAATGTGTGGAATT
TTAAAACCTGCTTTAAAAAACAAAAAATGTTCGGATATTGAAAACTTTCTCAAAAAATAG
AAGAACAAATTTTCAGAAAAAAATATTGCATTTTACAAAAAAGTTGGAATTCCATAAGTT
GTTCGTAAATAAAATTAAAATGGTCAGAATTTCCAGAAGTGTTTGTTTTCCCAAAAATGA
AATTTTATAAAATGTTCATAATTTTCCAAAATTGCTCGCGCTTCCAAAAATGAAAATAAA
TCATGTTTCAAAATTGTTCGCAAATGTTTCATAAATATGCTTTTTCAGAAAGAAAAAAAA
TGATACAGTCTGCGCTGCTTGTTAGATACAATGAGCGCCCAATAGGATCTTCCAAGAGAA
AATGATATGACGCATTAAGTGTCAAACTGTCAACCATTCGCACAGGCTATCGACGGCGAC
CGATATATTGAGCGGGAACGGGCACGCCTGACTAGGACTTGCAGAGGCCACTCCCTCCCT
CTTTCTTCGAGGGAAAAGTCAGTGTGCAAAGGTAGTGGATTCAGTTAACAAATTTGACAA
CTCATTCGGGCCCAATACATAAGCGACACGCTAATTTTTGCTCAGAATAGTGTGTCCCAT
GCATGGAACGAGAGGCTGCACTTCTGAAACATTTATCTTTTTTTCTAAATTAACTTCTAA
AACATTTATCGATAATCAAATTTGTACACCTCTACTAGTAGTAGTGTGACTAGTGTCACT
ACTCTGGTTTAGTTACCGTATTTTATTTAAAATTTTGGGAGAAATTCATTTTCAAAAATT
ATTGGCACAGACAAGATAGGACGCAGCTTCAGTGACTTTGTGAAGTGAAGTCACGCTGCG
CCTTAGCCCCCAACGTCCATCACTCATTCTAGATATAACAGTCAGGATTCATGCAAGTCA
AAAAAACACCAATACTTAATAGCTTTCAGCTTGCAAGGATGCACTGGAAACTCCAACCTG
AATATTTTCACGCAAAATTTATTTCATCGCTGAATGTAATATGAAACGAAAAACAGAAAC
GGTTGCAAAATGCAAAAACCACTCCCATTAGACAAGGGAAAAAAATGAACAACATAACAT
TGAAATTTGCAAGCATTTAGCATTCAGTGTCTCTATAGCATATCATTGAAATTTTAAAAG
TATAAAATATTGAAAGTATGAAACAACCAGGGAAGGAAAAAATAACCAACGTAGCATTGA
AATTTGCAAGCGTTCAACATTCAGTATTTGAACGAGCCAGAGGATGCCCCCCAATAAATC
TTGAGTGTTGGATGTTGGGGGCTGAGGCGCAACGTGACTTCACTTCACAAAGTCACTGTT
GCGTCCAACAAGGTGTGCCTCTGGAATTTCATTGTAATTAGTGGTTGTAGAAGCTACTTT
GTTATCTTTTATATTTTTTATTCAAAGCATTGTACCTATAACTATTCTCATGTTTGAATA
AACTTACAGATACATATTTATTATTAAAAAAAAAAGAGGAGTGAGAGATTTTTTTGAAGC
ATATTTTTTTGCCATAGAACTAACCATCGTTCACAACAATATCGCTGGCCATCAAGTCTT
GTAGGAAGGTACGAGCATCATCCACGAAAGTAGCTTTGTACACCTGTTTTGTGCAAAACT
GCATAATAAGGACATAAGGTACGATACGTTGAAAGGGAGATAAAGCAACAATATCAGTCA
GACATTCAGCCATTTATATTAGAGGGTAACCATGCAGAAGATCGGGACCATTTCATCAAC
ATCCACCATGTTCATCTGATGATCTGGACAAAAGGTACATACATATGATGATCAGAGAAA
GGCAACACCTGCAAGCACATCTTCTGCTACATATGTAACTTCCGACGATCAAATTAGCTG
ATAAGTCCTTGAGAAGGCTCAATTATTATGCAGATACCACTACATTACATGGCTGTTCTG
AACCTGACGGAAGTCAAGTGTGAACAGCCCAAAACCAAAAGGCTAGGGGGGTACACATAA
ACACGCCAACACACACCCCATACATCAGATTATCGGAAGTAGACCTATCAGCATATGTAC
ATACAGCTCTTGCAGACGACTGAATAAACAAAACAAAAGAGTAGGCGTGCCGTTCTTGCA
AGGAAAGCAGACTAGCAGTCGAAACTCCGGTCGCAGACACGGTCAGCTAGTCAGGTGAAT
TACGGGCATGTTAGGATTTGCCCTTGGGCTTCTTTCTTGATTTCAGGTCGATAACTATGA
CACTAATGTTGTCCCCGCTCCCTTTCATCAGGGCTAGCCTCACGAGACAATCCGCAGCTG
CTTTTGCAGCAGGATTCATAGTGGGTTCGCTGCCTCCATCAGAATTTGCACCGTCGTTAT
TATTCTTGTACCACAGAAGGATCTGTCGCCGGGCAACTTTGCAGGCATCTTCATTCGACA
TGACATCCCACAGACCATCGCTTGCTAGAATGAGGCAGTCATCATCTTTTGCCCGAGGAA
CAACGCTGACTTCAGGCTTTGGAATCAGAAATGGTTTCAGGTATCGGTCACCTGCAAGTA
GATAGGTGATCGGCCATTTCTGCTTAAAGTTAATAAACCATAAGAAGCTTCTGACTGATG
CTGCCCATGCACAGAGTAATTGCTAGTTTAACTGCTTTCAATTAAATTTCATATGAACAG
AAAGAAAAGAGTTTTGTCCAAGTTTAAAAAGTAAAAGTATTCACGGTGTAACAGCTATAA
CAAACTAACAAGTGCAACTAATATCCAGTATTAACCATGGTCACAAATTCACAACTGCCA
GAGTCACTTGCACGAGTAGCAGCATAAGTATACAGGGTACCTTTGTTCCTTCAATAAGGG
GGCTTTTTTACTTTTGCCTCCTTAAGCACATCAGCATCCTAATCCGAATACTTTTACAAG
ATCATATTTAAATTCACTGACAACTTGATCCCCGTCCCTGAATTTTTCTAGGAAAGGAAC
CAAAACATAATCGAGGAACACAGACTAATCTTAAACATGGTTTTTCCACAATGAAAACAT
GCTGGTGGCAGCAGTTGCAAGTTGCTAGTATATGAAACAGAGCATTTCTTTATGGTTATA
ATTTACTGCCTGAAATGAGCCTATGTAATATTGTGACAGCTTGTGATCTCATAAATTAGA
ATGCCATCTTAAAGAAACATCTGACCTCATAATAAAATGCATATACATGCCTACGTAGTT
TGTAAAGAAAAAAATCCAACTAAGAATTATGATGGAAATTATGGCACAGATTCAGTTCAA
TTCTGCACAATTCAATACCGCTGGATGTTTGACATAATGGCTCAACACCAAAGACTTGAG
AGTATTGCAAAATATTAAGATAATGGTAACTTGCTTTTATTCTTTTTGGCAGCCCGATGA
TTGATGGTTTGATATAGGCTCTCGTAGTTCACATATCATCACTTACTGACATCCCAAACA
TATGCAGCAAATAAGCTGATATGGCCATAGACCTACAACTATCTACTGCTACGGATGTTT
GGCCGAACCGAATAAATCGGCGCCATATATGCTGAACAGGTCTACAACATGTTTTTGTAC
AAGCTTACTTGTTGTGACACTTTTTTTGGGTCTTAAGCTCCTAGCTTACGGAGAGATGCC
TTCTAGAGTTACTAAAGTGTGCCTTCTTCTAGTGTTCATGAATAAGAACAGTCATGTTAG
GCTAGCACACTCGTGGTCAAAAAGTAACAGAAAACATCTTAAGATCTTAATCGCATTCCA
AACATGGCTTTACAGCTGGCTTGAAATCATCAATATGTTTCCCGCAAAAAAAAGAAAAAA
AGAAATCATCAATATGTTTGTCCAGGTAATAAGCTTGGGCGTGCAAAGGCGGAAAACTTA
CCGATTGACCGTGACATTGCGAGAATACCAGAGACACGATAACCATTCCAGTCAATGACC
TTTCCACCTGCGGCCTCAATCCTGGCACGCTCGTCTTTCCCATCAGGCTAGAACAGGAAA
GCATAATCAGATACAATTTGCCTTAACCAAAAAACTTAGCTGAACAGTAAAGCCCAGTAT
GTACTTTGTGATCGACGGACAGAGCAATCGGCTCCTTCCCACGGCAGAGCACGACGCGTG
AATCTCCACAATTCGCAGTTATGACATGAGAAGAGCAGACAATCGCAACCACGGCAGTGG
AACCGACGTTATCAGCGGCAATAGGCTCCGGACGGAGCTCCGTGACGCCATTGGAAAACC
TGATCGCTTTCCCCGACACCTCGTCGTCTACCTTCTGGAAACAATCACCGAAAACCTTCT
CCCATGATTCCTTCACGTCCACCTCCCCTACTTCTCCCAGTTCCTCCAACCCCCTGCCGT
CTCTCAGCACTTCTCTCAACACAACGTGGATCTTATCCCGGCAGTAGTTTGCGACCTGCA
CAGACATGATCAAGCATGAGCAAGAGGGCCCGCTTCAAGTCAAATGTGTTTGGTCCGGGA
CTCTGGGCCAAGAGTCACAGGAGAAGATAACCCCACCTCCGAGCCGCCGTGCCCATCGTA
GACGCCGAACAGGTGCGCTGGGAGCCGGAGCTCGGCGGCGTCGAAGTCGCCCCCGATCCC
GTCCAGCTCACGGCTGCTGGCGAGCATCCGCGCCGGCAGGGCAGCGAAGCGCGGCACGGC
GGCGCACGCGTCCTCCATCTCCGCGGCACGGCCGCGCGCCGCGGCGCAGCCCCACAGCGG
CACGCACTCCATGAGGTACACGCTCCGCTTGCCGCACCCGTCCCCCGCCCTGCTCCCGAG
ATCCGGTGGCCTCTCGATCCCCCCGGCGCATTCCGCCGAGCACCCCCCGCGCGCGGCGGC
CCCGTCCCCGGCGAACACCGCCGCCGCCATCACCCGATCCCACGGCAGTAAAACAGCCCC
GAGACCACGCCGACGGCAGCGCCGGCCAGCCGCACCACGCGCCTGAGCAGCCCACCAACA
GAGAGAGCGCGAGCCGTGGCGTCCTTTGCGCGAATCAAGGGTGCAGCAATGGAGAAAGAG
AGAGAGAGGGAGAGAGCGAGGGAAAGTAGAGAGAGAGAGTGGTGACGAGGAGGGTTGGTG
CTGGGTTCGGGAGTACGTGTACCAGGTGGGCGCGGCGCGCGGGGGCGTGGGAGGTTGCCA
GTGGCGGACGACGGCGTTGCGTGTTCGGGGGAGGAGGAGCGGATGCGGGCGAGCGGGACG
TGTGACTGTGAGTGAGGGAGGAAAGGCACGAGCCGCAAGGAAGCGAGGTGGGGGGATGCG
ATTGGCTGCGCCATGAAGAACAGGTGTCGCGTCTAGGCGCTGCTGCTGGTCTGCTCCAGT
TTTCCTTTTTAAAAACTTCCTCCCGCTGGGCCTGGAATCTGGATGGAGTGGGGTGGACCT
GATCGTGGGTTTGTTTGTTACCGTCTGTTGCTCACTCGAGATTTTGGTGTCTGCTATGCT
ATACTCGGCTGCCTGCACCGTTGCACACGGCCGCAGACCAGCTCTCGTGTCAAAAAAAAA
AAGGCGAGAAGCTATAAGTAAGTTGACTGAGTTTTCTTTAAAGGCAGGTACAATGACAAA
AAAGAGAGTCTACAATGGGTCATCTTTTAACCCTATCTTTTATAATTAGTTATTCCTAAA
AACATGATGAGGCGTATTGTGCTACGAGATCACCTCTTGTTTTCTTTTAAATAAGAGAAG
GCAAAGCCTTTTTTTCGAGTTTTCTCTTCTCCACCTCATCATTTATCCTATGTGGCACTT
CTAAGATAGCACCATTGTACATGCC