| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_139557
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_7578 |
3 |
1122 bp |
AK248684.1 |
Not available |
Available |
None |
CDS Structure of MLOC_7578
Contig Sequence (4817 bp)
>contig_139557 4817 assembly3_WGSMorex_rbca.fasta
GCTTCTCTCAAGAAAATAGCAAACGGGGGGTAGACAAATTANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATCATGTATATAGGCATCGCATCCAA
GACAAGTAGAACGACTTCTGACTGCATCTAATTCTATTACTCCACACGTCGACCACTATC
CAGCTTGCATCTAGTGTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATGA
CATGATGTAGACAAGATCTTATGCATTTTTTATTCTGCATTTTTAAGCCTAAACCATAAT
TATTTTAAAGTGTCTATTCAACCCCCTCTGTGCGACATTCACTCCTTTCAAACCGTAGCA
ATTTCCATCCAATGTGCAGAAACATCATCAAAAACAAATGTCATCGAGGTCCTCCTCGCG
AAACCCAAGATCTCTCATAATATGCTTGGCATAACCCGTCGAGGCCTAGCCCGGCGGCCC
GTCCTTAGCCATGGAGTTCGCTAACCCAAAGAAGAAGATCGGGCTTTGTGACATTGCCAT
AGATCACCTTCCTCCCCCACGCCAGAAGACCAAGACCGGGCGACGATTGCGCAGTTCACC
CCGAATCGGTCCGAGTCTCTTCTTGGGAGGCAGGCCGACGGCATGTTAGGAAGCCAAAAC
CCAACAGCGTCGGGTCGCCTCAGAGCAAAAGAGAGGGAGCACTTATGCAGCGATGTAGGC
GCATGTTAACGATCCGGAGCATGCAGCGCCGCTAGCATGGGCAGGGCCATTAGAGTGTTG
TCGAGTTTTTTTAATTATTATTTTGTTACGAAAAATATAAAATCAAAAAAGGTTTACAAA
TTTTAAAAAAAAGGCTCATCCATTTGAAAAAAACTTCATATCTTAAAAAAAGGTTCATCA
ATTTTGAAAAAGAGTTCATCAAGTTGGAAAAAAGCTCATTGGAAATTAAAAAAGTTCATC
AAATTTAGGTAAAGTTCATCAAATTTTTAAAAAGTTCAATAAACTTGAAAAGTGTTTGTA
AAATTCAAAAAAAGCTCATGTATTTTTAGAAAAGCTCATTGAACTGAAAAAATGTTGACA
AATCGTAAAAAAGCTCATCCATCTTCAAAAACATGCTCGTAAAATGTCAAAACAGTTCAT
CGATATACACAAAAAGTTGATCAACCTTAAAAAGCATTCGTCGAAGTTCTAAAAAAGAGT
TCATCGATATTCAAAAAGTTCATTGGAAATGAAAAAAAAGGTTCATCAAATCCTAGGTAA
AGTTCATCAAATTTTTAAAAAGTTCAATAAGCTTGAAAAATCTTCGTAAAATTCAAAAAA
AGTTCATGTATTTTTAGAAAAGCTCGTTGAACTGAAAAAATGTTGACAAATCGTAAAAAA
GCCCATCCATCTTCAAAAACATGCTCGTAAAATGTCAAAACAGTTCATCGATACACAAAA
AAAGTAGATCAACCTTAAAAAGCATTCGTCGAAGTTCTAAAAAAGAGTTCATCGATATTC
AAATAAGTTGATAGAATTTGTTTTTAAAAAAAGCGTCGCAAGCTCCGGTCTCAGAGGAAA
AAACTTTGAACCAGGCCTCGAATCAAACCTGTAAAAAAGCCGGACGGGCCCGTGGCGCGA
CATGGGCTTGCGGCCTGCTAGAGCAGACGGAGGAACAAGAATGAAAGCTCCGGTCTTTCT
CTGGGAAACCCTTGCTTGAACCCTCCGTCCCCTCCCCGCCGTCCCCTCCCCACGCGAGCG
GCGGCGATGGCGAAGAAGCTCGGGAAGAAGGCCCGCAAGTTCGCGCACAAGCACCTCCAG
GGCGGCGCCAAGCGCAGCCGCAAGCTCCGCTCCCAGTTCAACCGCCGCACCCGCAAAGGC
CCGTCCTTTCCTCCTCCGCCGCCGCCTCCGCCGCCTCTGCCAAGTGCTCCTTTGTTGGCT
TCCGCCGCGCGCTGATTCGAGCTTCTCCCTTTTGTCTCCTCCTTCTCAGATGGGAAGGGC
CGGGAGGACGACGACCGCCTGGACGCCGACGGCGGCCAGGAGACCCGCCGGACCGACCCC
GCCATGTATGTTCATCCCATCCTCCGCCGTTCATTCAGTAATTTCGCTGCAATGTTGCCA
CGATGAATACTGGACACTTCACTATCTTACAGCCATCTTGTCCGAAAAGTTGGCATCTGC
TCACTTACTTACTTACATCCATCTGATTTGACTAAACGTAGCTTGCAAATCTGCATGTTG
TGGGCATGGATTTCATCTTGTGTTTCTACTTACTGTAAAAAATCCATTCACAATGATGCT
GTTTGGTACTGCATTGATTTGTAGCTCTTTTCTTTTCTTTGTAATTTATTTAACTAGGCT
GAATACCATTTTCCTTTAGGAGCACGAACGACGATGTAGCTACTTTGGCCGACTGCTTAG
AGTTTCCAGAAGATGAGGATGAATTAGACGGGGATCTGTCTGACAGTGATGGCTATCTTT
CAGAGGTACGTTTGCCATTCTTCTATCGAGTCTCCTAATTCATCTTTGACAATGGTGACA
CATATTATAGCTTTTGCACTCGTTTCGTATTTTAACGTGGTTTTTCTATCCATGTCAAGC
TCAAACATATACAGTACAAATTTACCATCGTCCATGGTTCATGCTCAGCCCACAACTCCC
AAATTTGTCTTGCAGTTCTGTGGACAGGGCTTCTACTTCAGCACAGAACTTTTTCGAGCA
TTTTATTTTGGGGTTTCTTTTTTTTTTTTCATATGTCAAAATGGCAGGTAGCTCTAGAAC
TTGATGAATCTTCTGCAGTTGGAAGGAGCAACTTGATTATTTCACATTCGTTTTTTCTGT
TGATTTCTTCTAGACAATTGGGAGGGAAATGTTTTCACAATCTGGCTGAGGTGCTTAGAT
CAGGTTTAAAACTATACAGTATAGTGTCTGTTGGCAATATGTGCCCAAGTTTGTTTTATC
TGGTTATTACTCCCTCTGTCCCAAAGTACTAAAGTCGAGACACTTATTTTGGGACGGGGG
GAGTTTGTTAGTGTGTAAGCTTCTGTAATGCTATTGCTTGTTGGCCCTTGTTAACTGCTT
ATCGATGCTTGAAATTCAGGATCCTGAGTGTCTGTACTACTCTGACAGTGATGATGACAA
TGTTCTCAAAGGTAATTGTATGTTGACATGTTGTCAATGGCTTAACGCTTATTGAATTTT
GTGTGGTGCTAGTTTCTAAGCATCATAATATTTTTGCAGAGTGTATTGTACAAGATGATC
TTGACGAGCAGAACAATGAGATGCGTTTAGCTGTAAAGAAGCAAAAGAAAAAGTTGAAGA
AGTTGCTGGATAAGGTGAAAAACTGAAAATTGCCTTAGGTCTTGCTGCCTTACTTGCTGG
ATATATATTGCTTAGTTTGGTTGCAGGTCTGTAGTTATGTCATGTGCACAGTTAGCTCTC
TTATTGGAAATGATGTAGAGTAACTCTACATGGTTATAATCTGGTGTCGTGTTATTACTT
TCTATTTCGTCTTTTTACTAGCGTGAGCCTTCTAGATTTTAGATTAATGTGGGAATTTCT
ATCCCTTGAAGCAAACATGATACCTTGAATCACAGAGGTTGTTATAGATATATAGATTAT
TGCTAGCCATGCTTCTGAATGTGCATCTCATCTAGGAGCACATGATGTTCGCCTTTATAT
TATCTGTCATTTCGGAATTATGTGGCTGCAATGTGCCTCTTAGGTGATTTCTGTCAGGAT
TGAGAGTGTTTGTTATATTTGTAGGACCCTAAGTTCGCAAACTTCCTTGAGAAATGGCAA
TTGGAATTGGTGAACCATGAAAGTAAAGAAGTAAGTTTTACTTATCGTTTCTGCTTTATA
TGCTGCAATTCATGTACATCCTTTTTATAATGTACTTCTTGTGCCCTAGATTATCTCATA
AATAGTTTTTCTTTTGCTATTATTCTGTTCCAATCTTCAATAGGATTCAGATGAACAAGA
TGAGATGGATTCCGTGGACGATGCAGTTGATTCTGGTGATAAAGATCCTCCTAGTGATAA
GATCCTTACAAGCAAGACAATAAGTGAATGGTGTCAACTAGTATTAGAGGAACCTAAAGC
ACCTGCTTTGCGTAACCTTTTAAATGCTTTCCGGGATGCATGTCGATTTGGTCTGAATTC
AAATAGCCTTTCCATGCAGAGACTTCAAAGTACCGAAGTATTTTATCAGATAATATCATT
TGTTCTTTCCAAGGCAGACAACATATTCCGTGCTCTCTTAGAAATTTCTGATGATGACAA
GGGGAAACTTATGAATCAGAGAAATGGAAAGAAATGGCAAGATATTGAGCCGCTCATAAA
GTCTTACTTGTGGAATTCTCTTAATCTAATTAGTCAACTTACTGATAACCAAATACTTAC
CTATGTCTTGACTCGGCTTAGAACATCTGTCGTATATTTTTCTGCGTATCCCTCAACATC
AAGGAGGCTTCTCAAGGTATGTTCCTGTTACTTGTTGATATTAAGTTTAGTTTTGCATGT
TATTTTGTTCTTCTTGAGGAGATTCATGTTTGAAACCTGTTCTGGTGAATAATATTAAAG
TCGGTTGTTATCATGGTTTTAAAGTCGCTCGACTAGTCAATGAGTCGCAACAAAAAGGTT
GACTCAACCTAGTGTCGACTCGAAAAGCGAGTCGCGACTTGTCGCAACTGCAGGCTCGAC
TCTACTCGCATGAGTCGCGACTCGAAAACCTTGGTTGTTATTTTGGTTGGGCTGTGTATT
TGTAGGGAACCGATATACCTTCCTTATTGTTTTGAACCAGTCATATATTTTTGATAGTGT
AAGGAATGTTTCAAACA
