Contig Data
morexGenes
Links



Map Locations of contig_139549 (2793 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_139549

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7576 2 1607 bp AK363364 Available Available None





CDS Structure of MLOC_7576






Contig Sequence (2793 bp)

>contig_139549 2793 assembly3_WGSMorex_rbca.fasta
AAAGTTCAAATGCAGATATGGCCTGGCTCAGATACATGCTACCAAACACAGTCTTGGCAT
AACATGTCTCGTTTGATGCAGCCTACCAAACACAATCTCAGTTCAACATGCGTCAATACA
TACACTGCTACCAAACAACTGCAGTTGCATGTACTGAGCATGTTTATACTCAACATGTCT
CAAATGGGAACAACTAGCATAGGATGGGAACTGCTTCCAAACACACCCTTAATGCCTATG
TCCATACAGGGAGAAGCTAGCCAAAACACTCGATAGGTTCTTCATCATCAATTCATCATG
ATATACTACATGAATTCAACACAAATTTGTCTTCGATAGCAATAATTTACTAAAGGTTTT
GCCAAATTTCGTTGGGGTCAGTTGACCCCAATGCTACAGTGCCAACTCCGTCCATGTGTG
CGTAGATTAACGCTCAGGGACAGAAGGTCAATACTTAAGTACGAGGAGGATGAATATGTA
GCTACAGACATCTTAAATTTATTGTGTACAATACATAATGAAATGGATGGGAATATAAGA
GACGGACCAGCAGGCAGGGGCAATTCGATAAATATCAGCGTGTGTGTCGTAAGTCTCCAG
TAACTTTCCTCGCCAACTTGGATCATAAGAAGAAACACTCACACGAATTCTTCTGACTAT
TTCATCAGGACACCTTGAAGTCATGTCAAAGCATGCAGGAGTAACAACACCAGATGATGT
TTGCATCTGAAGACAGCAGGAGTGTTTGTTTGTAAGAAAACTTACTCTGAAGTGGGTATG
TTTCAAATTAACGCTTTAAAAATAGAATTTCTCTCTTTCTTTTTTTCCTTCTCCTTTTAG
ATTAACCTTCAAGCGTTCCTTGTGCCAGAGCTTACAAGGTTCTTTTTTTACAAATGTGGT
GTTCATGGGCACCAAAAACTAATGATTGATACTCTAGTAGATTCAGGGGAGAGGAAATCA
CTTACCACAAATCCACCAACTATGGGTCGTGCATTCCCGTAAGAATCAGTCATAGTGTTG
ATTCCAAGGACACAGAAAGAGCGGAGGTGGAACCGTTGCTGGGATTTATGCAGTACTTCA
ACTATCTTGCAACAAAGTGGATGGGAGTACCCTTCCTGTACGTTGTGCATTCCTCCGGAA
GAATGGACTACCTGTGGGGCAAATTATGGTGATTAGATGCTTCTTCATGTACATTGTGTC
AAACAAGAAATAAAGGGCAGCTCGGTGCACGTAGTTCCCGCTTGGGCAGGGTCAAGAAAT
CTAGAAGAAATTTAACCACCCAATAAGTTTTGAATTCAACCTTTGTAGAAGCATCATCGA
AGCCACCAATCAGATGAAGCTGTAAGAAAATGCTAGTGAGAACATTCCCAAGGGTGCTTA
ACTGCTTATTGTATTCTTTTTGTTGTTTTTTTTTGGGGGGGGGGGACCTACATCAAATGG
TTCGTCATCAGCACCAAGTAATTCTAGCATCTGTTTGAACCCTCCTTCTACAATCTTTGG
AAAGTCCATATGGCTAATGGAAGTCCTGAAATCAATTAATGGAATATCAGAAGAATCAGC
AAATGCTTTTCCGAGTTGTGAAAATACATGAGTTTAGAGTTTCACGAGAAACCAAAGTCT
TACAGGATCATATAAAACGCTCGCTTCTTTTTCACTTACATTCCAGTCTTGTTGTTGCGA
ATTGCAACACCCACACATGTAGTCATCTCATCTGTGCCCACTAACTACAGATGCAAAAGA
ACTGATTAATTCACCAATCACAGTATTCGAACGGTCCACGCATAACTATGCTTTAATCTC
TCTATAAGAACTAAAGGCAAAGCGAGCGGAATGTAGCAGAAAGTAATGGCGCGCTTTAAC
AGGATGCCAGTTTATAGGGCCACAAACAAAGAACCAACCAGGCAATCAGGTATAGGTACA
ACTGGAAATCCTACATGTCGGAATTCAGAGTTACACTCCAATAGCCGTCTAATGATCATA
AACCAATCCAAACAAATCTAGTATAAATTGATTTGAATAAAGTGATCACACATCTAAACT
ACCAAAGTGAGCTCCTGCCCAATCCCCATTTACAAGGAGGCAACACGGGTACGGTTTCCG
TCACGGGAAACGAAAAGTCGTCTTTGAGGCAGCAAAACATGGAGCGGCGCAACTGATTCG
AACGACGCGGATCGGACCAAGGATCCCCAATCTCTGCTCGATCGAAGACCTGAGCACAGA
GCACGCACCTCGACGCGCGCCGGATCCACCGTGGCGAACTCCCGCTGGAACACGTACACG
TGCCTGGGGCCCTCCGGCCCAGACGGGACCCGCTTCTCCGGCGCGGCCCTGAGCCGCTCG
GACGCGGCGCGCAGCCCGGGGTTCCCCATGAGCGCCGCCACAAGCTCGCTCCCGCTGCTC
CCCTGCAGGAACCGGGAGCCTTTAGGATCGTCACAAAGAGGAGAAAGAGAGAGCACACGC
GTGCGGGCGTGATGTACGCACCGCGGGGGAGGAGCAGGGGACGGGTTCGCCGTCGACCAG
GAGCATTATCGCCGTCGGAGTTTGTGGGGGTGACTGACCGAGGGAAGAGGTCGTGGAGCC
GACGAAGGAAATGGCCGGCAGCACGTGTTTTTTTTTATGTGAGCATCCATTCCAGCTGCA
TACCGTTCAGTCGTTCACCGAGGCGGCCCACGACGGCCCACGATCATCGCGGATCCTGGT
CCAGCACGAGTCCATGGGCCGGAAGCAGCCGTCGCTTCAGCCCAGCCAGCAGCCGTCGCT
ACGCAGCACACTTCCACCACTGCTTCCGCCGCA