Contig Data
morexGenes
Links



Map Locations of contig_139464 (4713 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_139464

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7530 3 1134 bp MLOC_7530.1 Available Available LOC_Os04g22870.1, FRAME:+1, EVALUE:2e-61, 13104.m02123 protein rpp14 family protein, expressed





CDS Structure of MLOC_7530






Contig Sequence (4713 bp)

>contig_139464 4713 assembly3_WGSMorex_rbca.fasta
ATTTTGTTTCGTATGTAGTCCACTAGTNNNTTTTGTTTCGTATGTAGTCCACTAGTGAAA
TNNNTAGTCCACTAGTGAAATCTCTTAAAAGACTNNNATTTAGGAACGGAGGGAGTATTT
TTGAGAAGAATCCCGCCCAACTTTCATTCAACATTTATATTTTTAAGCGTGGATCATTAC
CATATCATGAGGAATGCCAAGCCATATATGGCGCCCTGCCCTGCCCCAAGAGGCAGAATA
AGGGACGATTTTCATTGGGCTTTTCACTGCCGTGGGCTGCATCTGATGGGCTAACAACGC
ACCACCAACACTCTGCCTTTACCTCAAAAAATAAAAACAAAAACCAACACTCTGCCTCCC
TCACTCCCCATTGCAGAGAACGGCGGCTCCTCCTCCTCCGCCGCCGCCGCCCTCCCCGCG
ACCGGCGCGGAGAGTTTATTCTCCATCCAAGGCAAGCCCTCTGGCCGCAAACAAAAAAAA
GGAAAAGAAAAACTCGCGGATTTACTCTGTCCGAGGACGCGACCGTCGCCGCAGGAGACG
GAGGGAGGAGGTCGCCGTCGACCGGGGAGGACGACGGAGGCGGTGGTCGGTCACGCGCGC
GCGCTTCCTTCATATCTTCCCGCGGCGGCGACGCCCGTGTGGCGCCGGTAAGATGCTTCT
TTGCTGCAAACTGAGATATCTTTTGCATGAATTTCCACCAGTTTATGAACGTCCTTATCA
GCACGGGATTTTCTGCCCGGGACTTGCTCGAGTCTTGGCTCCGCGAATAGGTTCCGCCAC
CCGAGTAACTGACAAAAGAATATGATGCATTGCCTATTGATTTGTAGCAGCAGTTTAGCA
GTGAGGATTGAGGACTATGCTGCCACATCATTAGATGCTAATCAAGGTGGCGTTTTTTTT
TCGTATTTGGAACCATAAATACTCACTGGCTTTAAATGCATTGGTTGGTGGTGAGATTGT
GTTAGCTTTACCCGAATTTAAGGAGAATGTTTTTTGTTTGTGTAGATTCTCTGATGTAAA
TTGTAGGTGTGAAAAAAGAAGCATAAGGGTGATGATGTGATTTTTCTTGGTAGTTTAGTG
TACCGGTACGCACACTGAAATTTGTAACAGTGTATGCTTTTTATGTTATAGTGGTGAAGA
GAAATCTTTTGACGGGCTGGCTATACTCTTTACTGCCTTGGTTCTCTTGAAGAGGTTTCT
TCGTTTGAAATTTTCATTGCCATCCATCTGTATGAAAAATTGAAAATCCAGGTCACAACA
ACCAGGAGCACTAGTGGTCCCAAGCAATGGTTCATTTCAAGAACAGGTACATGGTGATGG
AGGTCTTCATCGACGCGAGCAGAGGAGAGGCTGATCCCGTCATCCTCACCCAGCTCAACA
TAACCAAAGTTATCAGAGACAGCATCCAGCTCAACTTTGGGGAGTGTGGCCTCGCTGCAT
CTCTTGGGTCATTTCAAGGTGCTAATAACTTATAAATCATCCTTCATTCCCCTAGGCAGC
ATGATATATGCCTGTGATGTGTCCCCAGTTTATTTTAGACTTTATAAGCACTTCTGAGCT
CCGGTCATATGCAGTGAAGTATGTAAATCCTCTGACGAAGATTTGCGTAATACGAGTGTC
GCGTGAAGATCACCAAAAAGTTTGGGCTGCTATCACAATGGTGAGGAACATTGGGAAGAT
CCCTGTGTCGTTCAACCTCTTGGATGTGAGTGGTGAGTGGATAACAGATTCTGGAACCAA
ATCAGTTTATTTTCTTTTTGTTTTACAGTTACTTTGATGCACTATGAGTCTTCGTAGATG
AATTCAGTAACTGATCTCATTGTGTCCACTGTGGTCTTAATGTGCTATGAATGGCGCCTG
AGTGCCTGAATTACACTTACATCCAACCCTTGTTGGCCCAGGATGTAGCACTTTCTGGGT
TAAGCCATTTGCATGAAGGAAAACAGAAGTGCAATTTCCTTTTTTCAAAAAGGAGTATTA
TTTAATTATTGAATCGCCAAACAAATCAGCTTACAAAAAATAAAAATAAATAACCCGAGG
TCATCCACATAGGACATGCGTCACGACAGCGACCCCAGAACCTACCAACAAACAGAATTG
CAAATGGTGTGCTAGGAAATCTGTTAGCCTCGTTGGGCCGTAGGGTGTTACATATTATTG
AATGCAATTTCATATCTTCACAAGCTGATATGCTCATTTCTTTATCAAATTGGTCAAAGG
TTCCTTTTTAGTTTGGACTTCAGTTAGCAATCACAGAAACGTCTTTCTGATTCCTTTACA
CGTATCTGTGTTGTTGAATTTGTGAAAACTGCTTTTCTCACCAAGAACCCACATTAGTTC
TGAGTGTTTTCGGTGCACAAACTTTAGGCTGGTAATGTTTCTCCACATATAGTTTGATGC
TTATCCTCATATTGTTTGGCATTTGTACCCAATTGCACTTGTTATTTTGCTGAGTCCCTA
ACAGAAAGAAATGCTTGCAAGACAATGTGCCAGACCAGAGCTGACCATCAACCTCGTTTC
CAGGAAGTATCAGGGCCTGCAAGAAAGCCGCATTGGAGTGCGAAGAAGCGAAGTTTGAGC
AGTACAAGCTGGCTGCTTGTGATGGTATCACGCCGGAGATCATCGAGTCCGTGCAGAGTT
GCTTTGGCAAACTTAAGGGGCTAGATAGCTAGTGAAGATGGAAGTTTGTTTCGCGCCATT
AGTCTTCTTTTCAGAGACTTGAAGCATATCAGTTCTGAAGAACTTATAGATTTACAGTGA
GCAATTGTGCCTCTGTACCACCTTTTCAATGGCTCTCCACCCAGTGGTCTAGGTTCGAAC
TGACATAGTACCAACTAATGTTCTCTGGCTGGTGTTGCATTACATGAAGAAGTTTGAGTT
CTCAATTTGTTTGGCTCCAGTCTCCAGGTTGGTTATCAGTTCATGTTCATTTTGAACAAC
CGTTTTTCGTGTTTGACTCGATCAACTGAAAAAAGATCATTAAAGGCTAGTACGTATATC
TAATTCACTAGGTAAATGCATATGAAAGGTAGATTCAATCTGACTCTGGTCAGTCAGATC
TGTGTTCCAACTTCCAAGTTCCAACTACTATTTTGAACTCTCTGCCTGCGAGTTTGACTT
CTACTCCCTCCTTTTCTAAATATNNNNNNNNNNNNNNATTTCACTAGAAGTCTACATACG
GAGCANAATGAGTGAATCTATATTCTAAAGTATNNNNNNNNNNNTCCGTATGTAGTCCAC
TAATGAAACTTCTTTAAAGACTTATATTTAGGAACGGAGGGAGTAGTTCTTAAGTGCAAT
CTGGGTGATGAACTGCACACAATTATCTTCATTCTTAAAAAAACGCGGTATGATCAAATC
TAATCAACCGCATGTGTCCTCCCAATAGCATCTAGTGTATCTAAGCGTAAAACACCAGTC
TGGCAGAAATGTGAGAACATCTGAATCTAGAAACAACAACTACAAATTGTGTCAGGAATT
TGTATATGCGAAGAACATTTTAAATTCTTACCAGCAATGGTGAGTTGCAATTGTGCTGAG
CCCCACTTTAGTTCTCAACTGCATTCGTGCTCTAATTGTGTTGGGAGCGCGATTCTGCAG
TAATGCATAGATGAGACACGTACGTCTTTAACTTGTTCTAAGCCTGGCTCCAGCATATAC
TGCACTTCTGCAGAAGAAAAGTACGCAAATCTACAACCTCTCAGTTGCCTAGAACAAGGC
ATTGCAAAATTAACAGGAGCAAAATCTAGAAGTTGGTATGAACTGAGATCTACTGTAATT
TATAAGTAATCAAGCACCAGATTGCATTGCTTAGCAGTATACTAGAAGAAAGAGTGTACA
TGGACACAAGAGAGCATCAAGCATGCATAACATGCAGGTGGAACATTGGGCTCAGACCAA
TTCCTAATTAAGACAGCAAAGTGGTAAGTTCCGCTTCAACCGCAGCAATCTGCTCCCTCG
GTACCATAATATCTGACATTTTAGCAGTTCAATTTGAACTACTAAAACGTCATATATTAT
GGTACAGAGGGACTAAATTTACAGTGAACATGTATCTTGCCCGCACCGCAACAAGTCAAC
GCGCCTTATGTGGCTTGCTGTGAGGCCAGTTCAGAATCCCGGACATTGATGGTGTAGCTC
GAGAGAAGTTGGATGATGGTGAAAGGACGATGAGCAACGAGGGCAAACTGCCTGCCCTGC
TTCACAAAATCATCGGCTTCAGAGATCATCTCTGTTTTGTCGTCCTTTAGGCTATACTTG
CAGATGCGAGCCGACGAACGCTGGTGTTTGGTGTAGTAGACGCAGTTTGCCTCAACGGAC
GGGAACTTATCGGCGCAGACAGCCAGGCACCTCTGATGACCGATGAAGATGGCATAGTTG
CTGATGTCTCTCAAACACACAAGCTTGTCACTCGTGGCCTCCAACCTGAGAACCCTAATG
AGTCTCTCTAGCTTGACGATGATGAGCAGCTGTCCGGCAAATTCCATAAAGAAACACCGG
CGGCCGTCGTTTGCATGTCCGCTCACAAGAGGATCGCCGGAGATAAACTTGCCAGGCGGC
TGGACGTGATGCACCTTCATCAAACCACCGATGCTGCCAAGCGCTTTAGTTAACTCGCTT
GTGGAGGAACCGGCCGGTGGTGGCAGAGGCAGGCCAAACCAAACGGCGGCGGCGACCTCC
CCCTCGGACGGCACCGGCGCCATGGCGCCGGTG