Contig Data
morexGenes
Links



Map Locations of contig_139399 (6678 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_139399

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7500 3 1578 bp AK364101 Available Available None





CDS Structure of MLOC_7500






Contig Sequence (6678 bp)

>contig_139399 6678 assembly3_WGSMorex_rbca.fasta
CCCGCTGCAAGCTTCTCACGTACAGTGGCTTCTTCCTCTTGAACAACTTCTCGCCACACA
GTCGTCACTATTTGTTGACGTAGTGCAGGCACAATATAAGAGGTGCATGGGGCCACATCA
TATCCAGTCACTTCAAAATCAAACACTACACTTTGTATCTGTAAAATAAATCCAAATGTT
TTACACATACATTTTCAGCCAAGTTCTTATGCGGACTTTGACTTGACGTGCAGACAATGT
ACTACAGTACATTATAAGGATCAACATACATGACCATGAGCCAACAAGAAACTACAATTA
TTAAGGCCAAAAGGAACATCTTCGCGGACCACACTCCTGTGTTATCTGATATTCATTCAA
CGGAGACCAAGGCCAACTAAAGGGAGCACAGGCATAGCTCAGAATATAAATTACTCCCTC
CGTCCCAAAATAAATGTCTTAAACTTAGTATAATTTTGTAATAGAGATAGTACAAAGTTA
AAACAGTTATTTTGGGACAGACGGAGCATATGAATATATATTCATGTCGCACAACGATAC
CATAGAGCTAGTACAGAGTTGAAACAGTTATTTTGGGACAGACAGAGCATATGTATTCAT
GTCGCACAACATGTATTCATGTCGCACAACGGTACCAGCTAGAACCTCAGAAGCATTTTT
GAAAATATATCCATGTCACGCAATTGTACCAACCGAAACCTATGGAAGCATTTTTTAGAA
TACTCAAGTCACGACACGGAATCAACTGGTAAATATGGAAGCGACTGAAAGCATCTAAAA
TTCACAGCCAAAATAGTATCTAGATTCGGAGGGGGTGCCAAATAAAACGTCCTGTGCTTT
GCGTGCCATCAGATTTAAAAATTGATACTTTCCACCGCAGATGACGGCATGAGCAACTCA
CATCAAGGCTACAGCCCTAGGTGCGCCCCGCAATCAACTCTCGTCCATGGGATCATTTCC
ACCATCTTTCTTGGTCTTTGAATCATTGCCTCCATCTGTACAAGCGTTTGCCACGGAGTC
TTCCAATGCCTCCAGGAACGAAGCAACTGTGAATTTATCTGTCAGAAACACAACAACAAA
AAAGAATTTTAGTTTTCAAAGAAGCAACTTTGATATCCTAAGCAGTACTCCCTCTGTAAA
CTCTTATAAGACGTCTTATAAAAGTTTATAGAGGGGGTACCAATAATGATCCCCCAACAG
TAACTAGATTAAGCGTCTCAGACATGGGATCTAACTCCAATTTCAAAACTTGCACAGAAC
CACTTTAAAGGTTCAGATACTAGCATCATGGACGGTTCATGGTTGGCATCTGCCAGTGAA
ATAAAACTCTTATTCTTTGCAATGGTCATTTCCACAGTAAAGCTAAAGTAAACCATAGAC
AACAACTCCTAGATGACAGACATCCACACGGAACAAGGTAAAACTGTTCTAATGCTTTTC
CAGAAAACCCAAAGAATAAAGCTACTGAAACGTACCCAAAAGAGTAGCTATGCTACACGG
GTTTGTAATTAACTCATCATGCACTTTGCATTGCTAAATGTTAGAGCCATGTGAAGAAGT
CTCCAACCAAAGCGCTACATCAATGGGCTACTTTTAACCGTTGGATCATATGGTAAAAAG
AAAAATGGCCTAAAAGCATGGAGACAAAGGTTTGGTTGCCTTCCACAATCTACCATACTT
TTGTGCCACAAGAGGTAGGTCATAGTTTTTTAGGTCGCCAAATTAGTAGTCACACTTGAG
GCAAAAGTTGGCCAGAATACGAGTCTTATGACAAATGGGTAAGATGTTAAGAAAGTGTGT
AGCTATAACTGTGGCTACGACTAAACATAACAATTTTGTCTGAGTAACAGTTGGCGGAAA
AGCAAACATGCCCTTGAAAAACACAGGCCCATCAAAACCGAACCCCTATCACCTCTCTAG
TACATTTCAACCATCATCTACTTGTCATCCAACAAGTGGGAGCACAGGAGTAGAAAAAAA
GAAGTAAACAAAAGAGTAAAATACACTGGAGATCCTAAAAGTATTCCAAGTGTGTCAAGT
AGGTCCTAAAAGTTTGAAACCGTTCACCGCGGGTCCTAAATGTGTATAAATCGTTCACTA
CAGGTCCTAAAAGTATACCAAGTGTGACAAGTAGGTCCTAAAAGTCACGGGTAAAATACA
CATATAGGACCTGCGGTGAACGACTCCAAACTTTTAGGACCTACTTGACACACTTGAAAT
ACTTTTAGGACCTCCGGTGTATTTTACTCTAAACAAAATAAAGTCTTTTCAAACTAAAAG
TATGTACTATAGTCATCTCGTGCCCAAACTATCTTTTATATATTTTTTATGGGGACGCCA
TGGTAAAAACAGATATAAGAACTTCCTCACCCTGAATACATTTTCCCCACTCCCCACTGT
AAATTATATAGGATGGTGGCACAAGCATTTGCAAAGTTCATAATACATGCACGCATAACT
TTTGTTGCTTATTCATTTCTAAACTAAGACTATAGAAGAATGCTACTCCCTCCGTAAATA
TAAGTCTTTTAAGAGATTTCACTAGGAGACCACATACAGAGCAAAATAAATGAATCTATA
TTTTAAAGTANNNNNNNNNNNATCCGTATGTAGTCTTTTAGTGGAACCTCTAAAANNNNN
NNNNTTTAGGAACGGAGGGAGTACATCCTATCTATAACAAAACCATTTATAGGGCATATA
AATGAGAAGTTCAGTTGCAGACAGGGAACATAAAAGGTTACATTTACTAGGGTCCACTCC
AAATTGAGCAAGATCTATTTGGCCAGTCTGCAGCACCTGCAAAACAAGCAAACATCATTA
TCAGAGTCACTCTTGAAACACCATCAGACACATAGATGTGCAGCAGAAAGAGGAAAGAGG
GGTAACTTATAACTAACATGAGTAAAAGCATCCAGTTGCTGTCGCAAAGGAGGACTTTGC
AGCAGCTCAAGAATATCACCAGCAGTCCAAGAACCCTGCAATCGAGCAGTTACAGAATGA
GTACAGGGTTCAGTGAACTGAAAGCAAGGACAACCAATACAAACCTCCGGAAGATGTGAT
GCCAACTGTTCAATGGGCAAAGTTTCAATTAGTGGCAATATCAAATCAGGCTTCAAGATG
TCTCCTAGTCTCAATCCTGTCACAAGCAAGCCAACATAATGAAACAGAAAGCAGGCCATA
GACAAAAGCACATTCATTCAGAATGTCACTTACCAGCATCAGGATCTGCCGTAGCATCTG
AAATTGCCAGGAGAATGGACGTAAGCATTTCAGAAGCAAGTCAAACAAGTCAACATACAG
AAAAGGACATGGTTTTTAGCTCATACCAGATGGCTGTATAGAGCTCAATATTCTCTGAAG
GTCAGCCAGTCGTACAGGTCCAGCGGCAGAAGTCACTTCACCAGCCATATCAGCGGTCAT
GCTCTGATCAACTAAATTCCCAGCTCTGAATATACAAGGAAGAAAGAAAAAAACAGCAAG
GGCATAGTGTTAGCAATTTGGCAGCAGCGCCCAAAAGTCGATACTTGTGTGTGCTTAGTA
CACCATGCAACTGTAAAGCATACAGGTGTGCAAATCAGATGTATTAACAACCTAGCATGG
AAATGAAGCTTGTAAAATCGAGATTACGAAACTTCATATATGCCACACAAGAAACAATAA
GGCAATATTCTGATAGATATAATTACAAAAATATCACAGTATTAATGAGAACAGCGAAAT
ATAGATTAAAAAAATCAGCACGGCAATGGCGGCAATATCTTGTATGTGACATAGCAACAA
ATATACTTAGTTCAGTTTAGCCATACATCCATCTGGTGATATGATTTCCATCTGAAAATC
AAGATTAATACTCCATTTGGCATTGCAGTGGGGATTATGATAATCTCATTTGGTTGAAAC
GCTTTTAGGCTAGTTTCTTTTCCTTAATCAAGTTGCAGACAAATAATAGTACTGTCTTAG
GGAATCTATTAAATGAAATGAAATGCAAGGAGATGATAACTGAATAACAGAATCTATCTA
AGTTCAATCTGATTTAGTGAATATCGTAGAAGACAAAACTTTTTCAGAGCAAAAACAACC
ACCACAAAACGAACTAAATACACAACCATCTAAAAGTTGACTTGGCTGCCCAGTGCATTG
CAAAGGCTGAAGAAAATAATGTGCTCAGACAGCATCAGATCTAGCATTTCATTTCACATA
CCTGGAAGAGATGTCATCATCAGCTGTATCTTCGTGTGACATTTCTGCTTCAATAGAAAT
TGCATCGCCATCTGCGCAACCGTATAACTTAAGACATGATCACAGTTGAGAGTTAGGAAC
CAAACGATCAAAGCATACCCAAGGGCCGATTTATGTAGGCATTAACTTGGCGGCATATCT
GCGAGTCCCCATCAGCATTTGTCTCCTGCATAATAAAGAGCACAATGGAAGTCAGCTGTT
AGAGAGTGGGAAGGGTAATGGTTTTCACAACAGAGTTCTTTACATCTAACTGACCTGCAT
CCATAGGAAGAATTTCCTGCTATCATGCCTGAACTTCAAGATGTACACCCTTCCAGAAGA
TTCTGCTACCTAATGACATGAGCCAATGTTGATCACTGAAGTTCCATAGTTCGCTAAAGT
AATCTTTGAGAGCATATCAAACTTGAATATATATACTTCGTATATATACCTTCTCAAAGA
CAGCCTCATCAGGGAAGACAATTTGATCCTGAGAGAAATGGAATCAAGGATAGACAGAAG
ACAGAGCTACAGTATCTTCAGAAATATAATAGAATGTGAAGCGGGACAAAATAGAGACAC
TTCCAAGTTTAAACATGAGTCCGTCAAGGACCTTGGGACTACAAACATATAAATAAATAA
TTTCTGCAAATTAAACTTTCAATCGGTTATCTATCAAACGACCAAGTTTAGCATTTATAA
ATTAAAATTAGTAAGAGATGTCTAAAACTGCATGCTCACAAGAGGATACATCTTCAACTA
TGTTTTGTCCACGGTCAAGCCACTGAAAATGAACCAAGCCTTCTTCACCCTACAAAAGAA
GTGGATGTATAATTACACTGTAATAACCAATAAATATAAGAATATGTATATGCCTTGTAA
ACTGTGCTGACAATATATAAATTGTACTAGAGAGACATAGAAATGAGAGCATGCATACCT
TTCCAATACGAACAAGCCCCTTGCGTGTGTCTGGGACCACCCGTGTTCCCTCAAGAGACA
TCTTACCAGCACGGAACTCACACATTATATCCTGAGAATGCATCAAAGGTACATCAATGA
ATAATAGAAACACGTCTTATTGTACGAATATAAAGACTAAAGAGAAACATTAGCACATTT
TTCTTGAGAAAAAAGAGAGCATCCATATTCTGACTAATGACACATGTATCCGCAAGGGTT
ACGCATATATTCATACTTTACAAATCTAAGTGTCACGAAAATAGTTTTTGATATGTAGAG
CAAATTGTTAATTATGCAATGTGACAGAATGTCAACTAAGAGTTTGGTATATTTGAGTTT
GTCTCCCAAACACGATATCATGTGGTGCTTGTTCTCGGATAGAATAGACTAGTTATCCTA
CCAATTTTTGAAGAACAATACCCCAATCCATATCAGCAGTATTTGTAGAAACAACAAAAA
GTGACGCTTAGCTTTACCTGGAGTGGTTCACTGCTCTCCATCGATGGCAGTACCCAACGA
ACAGGTCCTAAATTAGGAGAAAAAAGATAAGTACAGGATAACAACAAGTCTTGTATTCCA
AATCAAATCAAGCGAGTGAGAACTGATAAGTAACATAAGCATTTGCTTGGCTTTCACTTC
TAAGAAGAATTGAGCCTTGCCTTCCAATTGCAATGAAGATGAGGTATGGTAGACCAAAGT
AACTGCTTTGGTACTTCGTGCATATCAAAACGAAAAGGTTCTAGATGCACTTGCTTACAG
AGAACAAACTTTTGAAGAGATTAGCAGAAAAGCAGGTACAGCATATGGGCATGGCTATCC
ACATTCCATGGTATTTGCGTCTTCAATCTCTGATAGTCTAAGACAGAAACATTCTATAGA
GCATCTAAACATTGGTTGCTGAGCCATCAATCTATGTTTGTGACCAACTACTAGGAAAAA
CATTGCTGTTTGTTTGTTCCTTGATAGAAGTACGGATGCTATCATTCAACAATTGTCTCT
CTCTTAAGATAGTATACACAAACAGAAAAAAGAAGCACTTGTCATTATAAGCTGATATGA
GCAATTTTTGCCAGTAGAATGATAGGTAGTATATCTCAAGATTGACTCCTAGCTATATCA
TTATCAACCATACAGCTTACAGCCAATTGTTATCCTCAAGGTGTATTCCCTAGCTGTAAT
CATGCAAGCACACATTACAACAACTAAACCGGCTCCTCTCGCAATTGGTTGTTGTCATTT
TCTTGCCAAATCATTCATCTAAACAAATAAAAACATATCGATGTTTCATCTTTGAAGATA
ATAATGGCAAACTTGATAGAGAATGAAACGAAATTCCACCATTTGCACAATCAGATTCCC
CAAACGTACACAATGCTGCACATACAGACAATAACAGATGTCTATCGATTTCCGCAATAT
AAACAAAGTGTGATCTACTTCCTGCAGACATAGAAAAACATACACGAAAAAAAAATAGCA
GCGAGCCGGGGTTTTTTT