| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_139284
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_7452 |
1 |
1516 bp |
MLOC_7452.1 |
Available |
Available |
LOC_Os04g49160.1, FRAME:+2, EVALUE:2e-62, 13104.m05019 protein zinc finger, C3HC4 type domain containing protein, expressed |
CDS Structure of MLOC_7452
Contig Sequence (8523 bp)
>contig_139284 8523 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGTGTGGGCGCGGATGTCGTGGTAGCTCGCGTTGCTCCGGGGGCGTGGCGG
CATGACGGGGCATGGCGGCGACGAGGTACTAGAAGAGGTGAGGGAGACGGCACGGCGACG
ACGAGGTACTAGAAGAGGTGAGGGAGACGGCGCGGCGGCTGTGGAGCACGGAGAGAAAGA
CACGACGATGGCGGAGCGTGGGTAGAAAGCACAGAAGGGAATGAGGCGGTTGGTGAGGGA
CGTCGTGGCGCGAGATTTATAGCGTGCGCTCCCCGACGCACACCAAAATAACGCGCGTGC
TACCTCTCTCCCTGGGCGCTGATTTTTTTTAGTATGTAACTGTTTCGTGCGTCTGCTCGA
ACGCGTCGCTCGGCCGCTCACGTACCAAAACGATAGTTTTTACCATGCGCACGACTTTTA
ACACTGTTGTTAGAGTGATCTTAGAAGATACAACAAACAAGTTGTTCAAAATACTTTTTT
ACACGTGAGGTTGTTAAAAAATAAGACATTGAAAAGAAGCAGTGGGCATCCTCCAGTTTA
AAAGCAACATTCACCGATTGATCTTGTCCACTCCTTCGTGTTCCTTTGTGCATGTCACGC
CTCCGACGGTCTTATCTCCTTTTGTTCTCGATTATGCACACCGATGTTGCTTTCCTGTTG
TCATTGTTGTCGCATCCAGTGACACGGAGTTGGTTCTGTCCCCCGCTTTTTTTGTAACGG
AGGCAAAAGATTTGCCTTATTTATTAATTAAGAGGAGAGTAGAGTTTTACACGTGCCCAT
ACAATGGCGCATGACAATTACTTGCGTAATATAATTTCATCTAGTTTCTTTGCACCCACG
GAGTCCTATAGCTTTGCCTCCTCAAGGATGGTGTTGAGGATGATCGATGGCGGCGCACTC
TTGTATTGGAACACAAGCATGGTTCGAATTGTCCAAGAGACAAGCATGGTTCGACATGCC
ATGGCCTTGCATGATGAAATATCTTCTAAGATCACTTAACAAACATTCATTTCGTTTCAA
ATCGTCCAAGAGACAAGCATGGTTCGACATGCCATGGCCTTGCATGATGAAATATCCATG
CCAGTTGTACTATCCCACCACTCTTCGATGGATCCCGCCAAGTGCCAAGAAGGTATGTCC
ACATGAACGAGGCCAAGTTTTGCAACCATCATGTTCCAAAGTCTAATGGTGTACCGACAC
TTAAAGAAGAGATGTGGTCTGATCTCGGGCTCCCGTTTGCACATCGGGCATAATCCACAA
TTTTTCCATCCTTGCTTGGCAAGTCAGTCGGCAGTCCAAGGAGGGCCAACCAAGCAAAAA
ACTTGACCTTCGAAGGTTCCCAACTCTTCCATATCATGCGTTCCAAGGGCAATATGACCA
AACCCAAGAATTGGATTATCTAAGATGAGGCTGCTAAGTAAACTCCATCATTTGTTTGCT
TCCACACGATCATGTCGTCTACGAGCTCATCAAGTTGGAAAGCATGCACAAGCATCCAAC
GCGTGAAGAATTCCCGCATGTGGTGGCCGGTGAAAATATCGAGGGGCTTTATCTTAAGAA
TCCATGTGTTGTTCCTTAATGCTTCTCGAACTGTGACGTCCGAAATGCGGTACTATCCTC
ACGACATCTCGAGGGCCTCGATGAGGATAGAAGCACATTTCGGGTCGCTTCGCAAGAGTG
GATATCGTCACAATAGATGTAAAGAAGAGTTGAGTATATGGAGTCGACTTACACTCGCCA
CAAGCTAAAACATGAATGATCTCAATACATCAATACATATCAATCATCATACAAAAGAGC
AGGATCCAGATACAGATGAAAACAAACAAAAAAGAGATGACATCCACCCCGCTAATCCCA
GGTTGCCGATGTGGAACCCATCCTATGATCGGCAAGGAAGAAGAAGAAATCCAAATAGAA
CAAGCATCACTCTCACGTCAAAGCATCACATTACCTGTACCTGCACCTATTGTTGTAGTA
ATCTTTGAGCTACAGGGACTCAACAATTTCATTACCAAGGGTATCAAGACTAGCAAAGCT
GTTAAGTGGTGAGGTTGCAGCATGCACTAAGCATTTGATATCTGGCTAACTTACCAGTAC
AAGAATAAGAAGAGTAATTTATGCATAAACGGACATGAACTAGTAATGATCAAGAAATGA
TCCCGAACATCTACTTACGAGTCATTCATAACCCCACCATGTTATTTTGTTGGTTCAAAC
CTCACAAGAAGAGACGGTCTTCGTTACACACATAGTTGGTGTATTTTAATTGGGTTTATT
ACAAGTTTTCTACAACATGGTATTATAAAGTTTCTAAGTCGTCACATAATCGCGGGCATG
GCTTTCCAAAAGATTTAACCTGCAGGGGTGATCCAAGTAGTCCATAAAAAATTCCACACG
CATCCGATGAAAAAACCTCACACCATGATAATACGATGATTTACGATAACGAATCTCGAT
GGACAAGCCGCTCGTCAGAGGTAAAACTAAACCAACAAGACCTCCCAGTGTATCGACGAT
CCCGATAGAAGCTGCGTATCTTGTTCTCATGACACGACCGGATCATCCATACTTCTGATA
GGCCAATCACAGAGTTGCCCCTGGCGGCAACTGATGGTTGACAATTTCAGACGAGCACCA
TCAGCAGTGTCCAACCCTGTATTATATTGAATTTAAATCCACGAGGGAGTGATCCTCTAT
GCAATTAATAAATTATCAGTATTATTATATAGGAATATTTTAAAATCAATGTTGGGCCTT
ATCGGAAGAGTTTTATCGTACAAGGAATGGTCGGGGGGGCGGCTCATAATACCCCACATG
TGTTAGAAGCGCTCATCAAAGAACATAACACTAGTAATTAGAAATAAGGCGACAAGGGTG
GAACAAAATACCAAGCAAAAGCCTGAGCCTTCCACCCTTTACCAACTTTGTAGATGCACT
AATTAAATAAACAAGATAGTGTGATATGCCAAGATATCCATGTCCCAAGATGGAACAAAC
TGCACCTCTAACTAGCAACGCTATAAGAGGGGCTGAGCAAGCGGTAATAAAGTCAAACAA
CGGTTTGCTAGGATGTGGAGGCTTAGAGGGTTATCATGGCATTTTGGAAGGCTTGACAAA
CAAGTGATAAGTAGCGATACATATTGATAGAAAACGAGACAACTTGCATAACAATGATAG
TAGTGATATCCAACGTAATGATCATCTTGCCTGAAATCCTGTATGGAAGAAGATCGAATC
CTTGAAATAAACGAACGGGCATAGTCGAACGAATCCTCACAATCCGAAACGCTTTCAGAA
CTCTAGAGAGAAGAAGCAAATCCGAAAACAAACAAGTGACACAGTAAAGACCACAACATA
TTCATGATATGATGCGCAAACAAATAAGATACATGTCCATTTAATTATGCATGGCATGAC
AAGCACAACAATCAAATACTACACANNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATATT
GACGAAACTCCATATTCAATTATTTAGTTAGCTTTCGTTTATGTATGCTATAATTTTAAA
TGTTTTTCAACATGGCAAGAAATGAATCATAAATAAACTACACTATCTTGGCATTTACAA
TGAGGCCGAAAACAACTGATAGTATTTCCGAAACAATCCCATATATAAATTTCAAATTTG
ATATTGTTCTGTCAAAAACATAATTTTGATGTTGTTGAACATGCAAAGTAAGTGAGCCAT
ATTATTCTACATGTTTTTCTGAGCAAGTTACATCTATAGTTCATTTAATTCACAACTACA
GTTATTTAGTTTTGAATTAAACCGTTTTATCATAGCATTTATGTAAATTAAGCGCAAACA
ACAAGTTAAACATTTTTATCATAGATGAAAGCTGCAAATTGTTAATCTATATAAAATTTT
GAGTATTTTAAATATCTAAATTATTTTAATCCGATGCATCGTTATTTAGTTACTAGAATT
TTAAAACAAGAGCATTTTCTGTAACTATGCAGGCACTTGTTAATTGGGAAATTTGTTCTC
CGAGAAAAAACATAACCTGGGCTGAAACTGGAATCAGGCCGAGATGGCACATGTGCATCA
TATATCAAAAACATCGCCCTGGGCACACAATAGAGGGGAGCACGTGCTGGCTTACCATGG
GCTTGGCCCAGGTCGGCGGGGCTTGTGTGGCGCTAGGCCAGGAGCTGAGCCTAGCGCGGC
TGGGCCTGGCCATGGCGCTAGACGCCTCGGTGCAGCGTTGAATAGCGAGTATTCCTTCCG
AAGATTCGCAAGAAGCACTCTCACACGCTGCTACTTGGCGTATTCCCAGCCGCCGTCACA
TGTTGCGTTCTCAGTGCTTTCTTTGAATTTTATTATTTTCATTTTTTTCGTATTTTTTTC
GGCTTTTTAGATTATTTCTTGTATTTTTTTGGTATTTTGGTTTTTCATCGGTCTTTTTTA
GTTTTTTATAAAAAACAATTTTAAAAAATTTCGCAAAAAATGTATTTTCTGTTTTTTTCG
TGAGAGGCATAGTTTTACCTTCACGAGAGGCACGGCCGTTCCTCTCGGAAACAAAAAAAA
TGCATTTTTGTGAGAGACGCAAGTTTGCTTCCACGGAAGGTGCGGTTTCGCTTCCGCGAC
GGACATGGTTTTGCCTTCGTGAGAGACACGACCGAGCTTTTAGGAAAGGGAAAAAATAAT
GCATTTTCTGTTTTTTATGAGAGGGTTTTTGTGAGAGGCAAAGTTTTGCCTTCGTGAGGC
GCACACCTGTGCCTCTCGAAAAGGGAAATAACATTTTTTTTCACGAAAGGCATGGTTTTG
TTTTCATGAGAGGCACAGTTTTGCCTTTATGAGTCGCACGGTCGTGCCTGTCGGAAAGAA
AAGGAACATATTTTCGATTTTTTCCTATCGCGAGAGGAACGGTTTTTTTATCCAGTTTTT
TTCGTGAAAAAAAGTTCATCAAAACCTATCAACATGGAATCTAGTGTTGAAGATCTCAAC
GCAAGAAATTCAACACTGAAAATGGTTCGAGATTTGGATGCACGATTTACGATATAAAAC
ATTTTAAAATAGAAATTTATATTAAAAAAACTCTCAGGTTGCGACAGATGACACGCATGC
AATACATCACTTGTCGAAACCTAGGAAGACCGAAGTAATTTTTAAAAGAAATATTTCTTA
ATTAATGATTTTAGATGAAATCTGTTTGTTTACATGAGTTAACGGGTCCGCTAGTCGGCC
CGTTTTGGAGGTCACGCGAAAACCAGTACAAGGGCCGAAGAGGCTTGCGCATAATTTTTG
GACCTGACCCATAAAAGAAAACAGTTGTTTTTCTCTATTGATGAGTTTTAGACCGAGTAC
TCAGGCAAATCCTATTTAACGTTGTCGGCGCTCGTTAGAAGTGCATTTTTTTTAACCGTC
GCCTGCAGCTCTCGGTCGTGAGCCGGACCAGCGAGAGGTGGGGAGGGTGTTCCGGTTTGT
GAACGTTCCAGACTTTTCCTAGATGGTTTTTTCATTTTGGTTTTTTCAAGACTGGTTTTT
CTTTGGTTTATCTTTTTTCATTTTTATCTATTTTCTTTTATTTTTATTACTTTTTCATTT
TTATTTTAGTTTATATATAATTTTTAATATTTTCGAAAAAAACGCAGCCATTTTTTGATT
AACTTTTTTTCAAACGAACAAATATTTTTCCTAATCAATGAACCCTTTTCAAATTTTATA
ATTTTATAATTAAAATTTGGTGAACTTTTTCGAATATCGATGAACTTTTTTCAAATTTTG
ATGAACTTTTTTATATTTGATGAACTTTTTTTGAAATGGATGATTTTTTTTTCAAAAATG
ATAAACTTTTTTAAGTTTGTGAACTATTTTTTCAGTTGAACGAACTTTTTAGAAACTTTT
TTCAAATTCATGAACTAATTTTCAAATTCCATGAATTCTTTAAAAATTTGTGAACTTTTT
TTAGATCAGTGAATTTTTCGAAATTCGTGAATTTTTTTTTTCAGTTCAACGAACTTTTTA
GAAACTTTTTTCAAATTCATGAACAAATCTTCAAATTCCATGAACTTTTTAAAAAATGTA
ATCATTTTTCAGATCATAGTGGATTGTTCAAATTCGTGAACTTTTTGTTTCAAAATTTGT
GAACCATTTTTCGCTTGTATGAACCTTTTATGTTTACATATTTTTTGTAATTTTTATGAA
CAATTCGGTCCTGAAACTTGGCCGGCCCATTATGCAGGGCGTGTGGGCGCTGGTTCTCCT
AGCCGGCGTTTAAGGCGCTGACTAGGAGCTCCCGAGTACTCATACACGTGTCGATTAGTG
AATGGAGCTAAAAAAAGGGCCTGCAGCAAATTAAAAAACGGACGTTTGTTGATTAGTCAC
TACCAATAAAGGTGCTGAAAGATGTGAAAAATGCATAGGGAAACGGAGTCCCTGATGAAG
CCGCCCCATGGTCGTGGTATACATCAATACATGCAAACGTTGCCGGACGGCCGCTAAACC
TGTGTGACATCGCACGCACGACATGCCAAAACTAAACTCGGATCATGCAAAACTTATGAA
TGCTCTCTGCAGCACGCGGTTTCCTGCCGAAAAGGTCCCAACCGGAAACAAAGACGGTAC
TCTAGCCAACAGTTTCCCTTCACTAAATCTTTCAATGTGCACGTGCCCCGACGACACCCT
CTAATCCTGCTCGCGTTTGGCGGGCGGAGAGAGAGAGGTGTCACAGTGACCCCCTACCAC
ATTGATGGACACTGCGAGCCGTGAGGCCGTGACATGAGAGCCGGTCAGCCCGCGACGACG
TTGCCCACACGAAATTCTCGAGCGCGCGACAGCCACGCCGCAACGGCACGCCTTTTCCCC
CCGACCTTCTCCTGCACCCGGTCGACACACACGCGCACGACGCGAGCGCACCTCGCCAGG
CACGATAAAACAAGACGCTTTTCCTCTTCGGTTCTCAGCCTAGATGCGCCGCTGGTGTGC
CCACTCGCGTCTTGCCTTGTGAAGCCGAAACGCGCACGCGCGCACGGCGTCCACTCGCGT
TTTGCTGCTGCCGCCTTTTGCGCTCCGGCGGCAGCGAAGTGCTCTCGCCTGCCGGCGATG
ACCTTCCCGCTGGTGTGCTACTGCAACGCGGTGCCCCGGCCCATCGCCGCCGTGTTCCAG
TTCTTCCACGCCACCGCGCTGGCTTTCGTGCTCATACTCTGCCTCCTGGGCCTCTACGAG
TTCCCCTACACCCCCGAGGAGCACGCGGTGCTCATCAACGGCCACCGCCGCCGCCCCAAC
CGGGACGGCACGCTTCCGGAGACGGTGAAGCAGCGGCTGCCCCCCGTCGAGCTGGTCGTG
CACCTGGCGGAGCGGTCGCGATCGTCGACGTCGAAGAGGGCGGCGCCGGCGGGTCGCTAC
ACCGACGGGGGCGACGCGAGTACGTGCAGGGTGTGCCTGGAGCGTCTGGAGCTGACGGAC
GAGGTGCGGCCGCTGGGCAACTGCGCCCACGCCTTCCACAGAGGCTGCATCGACCGGTGG
ATCGACGTCGGCGAGGTGACGTGCCCGCTGTGCCGGTCCAACCTGCTGCCTCGCCAGCGC
GGGGGGCTGCTTGCCAATGCCAGGGCCCGGTTCAGCTAGTTCGTGGAGGGGCCGCTTTGT
CATTTCAGGCGCCGATGGTACGTACACTGGATGGGTGCAGCAGGCCAACCGCGGGCTGTT
CGCGATCAGGACGACTAACCACCCAGCAGTACCTGTGCTAATCAATGGGCACACAGGGAA
ATATTGGCCAGCTCCTGTTGAGAAAATATATGGAGCAGTACCGTCCGTGTTTAGGGAAGA
GATCGAACCAGTGATCACAATAAAGAATGGGTGATTGAGAATTCGAGATGGGCTGGCAAT
GTGTCCTGCATCCGTCTGGTCGTGTGCACTGTTGTGTCTTCTCGAATTGTTGGGTACAAA
GGTGCACCCGTGCTGACATGTTGTTATCGATGATTAATTTCTTTCTCGTTGAATCGATGT
GTAACTAATCATCGTTACCTTCCCACAAGAAAAGAGACAATCGTCATTATTATTATAGAT
ATGTCTCGGTTCCATCTAGATGTGACATAATATGATATATAAGCATCATCTCGAGAACAA
CTAACAAGTCCACCCCCTCATCCTTGTTTGTTCATTTGTTTTCCTTTTTCTACACCCAAC
ATAAACCAAAGAAGAAATTCGATTGTGAGCAATCTTTTTTGTTTGATTTGAAATATTTCA
ATATTTTTAAGCGTTGTTTTATAAATAAGATGAAATCTTCTAAATCACTAACCTTCCTAG
GGATGGAGCTTCCACAACCGATTGCGCAATCGATTTTGGACATGTTATTTTGGTTTTGAC
CAGGTTAAGACAATGGTGAGCCAGATGGCCGGTGGGCCTTTTGGCCAACCATGAAAGTTG
TGGTCCTCTCTGCTCACGATGACACGTGAGCTGAATATTGTACATTTTGTGAGAAAAAAG
ACTCGGTATCACGACTATTTGGAGGCGTTTGCAGAAGGGGGGGGGTGATCTGCGCCGGCG
CGC
