| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_139275
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_7446 |
3 |
2218 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_7446
Contig Sequence (5585 bp)
>contig_139275 5585 assembly3_WGSMorex_rbca.fasta
GGAAAAGCCAAGTGTGCTAAGAACTATGAAATATAGCAATTGTATGTTTCACATGTGTTT
AGTATATCCAAATATGATTTACTTATCACATGCATAACAATACAAAATNNNNNNNNNNNN
AATCGAACATCACATTGCAGATGATCACCACAAATTAACCAAACAGTTAACTAAGCATCA
CATTGCATAATAGAACATACTAGAAGGTCATATTGCATAGTAGCATTACATTCGATATTT
CACTAGAATTTTTGATGGAAAGGAAGGAGCAACACATGTAATAGGTAAACGAAACATGCT
AAACATGCGTAGCTAGATGAACATATGCCATTAGTCATTAAGCTAAAAACAAGATATTCC
TTGTCATCAAAGATATCGATAACGATGAGCTTGGAAGAGGGTGAGGCCTCCACATCCTAG
GTGCCCTCCTCCTAATGCTGAGTGGCCTAAGCCTATCCGGGCATGAACTTGTCGGATGTA
GAGCTGTGGAAAGCACGGGCATAGCGAGAAAATAACTCGTAGTCTTCGTCGAAGGCACCA
GCGGAGCCCACAAGAAAACACCATGAGCTATTGTTTAGAGGAGCAACCGCGTGGGGGCGG
CCATGCGTGAGTTGTTGAAGATTGCCTCGACGGTGAGGTGCTGCTCCAAAATCTAGGGGT
CGGCACTGATACGTCTCTAAAGTGTATATAATTTATGAAGTATTCATTCGAATATTCTAC
AACTTTCATATACTNTTGGCAACATTTTATATTATTTTTGGCACTAACGTACTTATCGAG
TGTCGACTGTTAGTTCTTGTTTGTTTCTGTTTTTTGTTTCCTGGAAAATACATATCAAAC
AAAGTCCAAACACGAGATAAAATTATGGAGATTTCTTCTGGAATATATGCGAATATTGGA
AGAAGAATCAACATAACACGGTACCCGAGGGAGGCACGAGGTAAGAAGTCATGACCAGGG
GGTTGGCCGCGCCCTGTTATCTCGTGGCTCCCCCATAAGTTGGTTGGGACCCTTCTTCTT
TTCCAAGAAATATATTTTTTCTATAAAACTCCCGTAAAAATTTCAGCCTGATCGGAGTTA
CGTATCTACAAATATTTAAGAAACATTGAAGGGGTAGAAAACAACACCGAAAACATGAGA
GAAATAGAAAGAGAGATCCAATCTTGGAGGGTTGCCATGGAGGCCAATGACCATAGGGGA
GAACCTCTCCCCATATAGGGAGATCCCAAGGTCGGAGAGTGTAACAGCCCCAATGCATCC
TTTCCCTTTTTGTATCTTTCCTTGTATGGAAAACTATTATGTTTAAGGAGAGTGGAATAA
GATTGGTCTTGACTTCATTTCTGTTGCATCATGGCATCATGCATAACATCATTTGTCTTT
TGTCTTGTTCTTCTTGAGTTGCACCTTGGTGTTTCAAAGATATTGAATGTGTGAGTGTGA
CTTCGTGAGTGTAGTGTGATTGGGTGCAACAAGATCTCAACTCAAAACCCCCTTCTTGCA
CCATAGTTTGGAAATCCCTCCTTTCCAAATTATAGTGGAGGCAGCTTTAAAGTTTCTGTT
TTTCCTCCATCAAAAAGTTCCTTCCCTTCAAAAAATTATCTTGTTAAATGTGGAGTGCAT
CCCCTCGGGTTTTATTTTATTTCCCTTTTGGTTTTAATTTAAACAGAGCCTTATTTCAAA
TAAAAGGGATTTATTTTTGCTCTCCTAAAAATGGCCAATGTATTTTTATAAATTGTTTTT
AGCAGACCAAATGTATTTTTCTTTTCTTCAAAACATTTTCTAGTCAGCCCCAGTAATTAT
TCAAAAGCCTCTATTATTTTTATTTTGCAGAAAGTATTATGCAGAGAGAGAGTAGCCGGC
CCAATTGCTGTTTGATTTGGCCCAAGGCCCAGCTGGCGACGCCCTTCTTCCTCGTTTTGA
CGTCGGCACTGTACGATGCCATGGCAGCCACATATCGTGCTTTTCCGTCGGTTAGAGAGC
CCCTGGCTTGAGTCTCGAGCTATAAAGCAGCCCGTAGACTCCCCTAACCCTAGCCTCGCC
GTTTCCCTCCTCCTCTCCCACTTAGCACCGTCGGGGGAGTCCCGAGCACCACCACCGATG
CCATGGCCGGCTCCTGCAGCAACTCGTCACCAGCGTAGCGTTCTCTTCTTCCCAACTGGA
CCAGGAGCACGCGGATGTCAAGGGGGTTCCGTTCCCATGAAGATCAGACGCCAAGATCAA
CGTCCACTACGTCCCCGACGATCGATTCTTCTTCCACCTCTCACGACCTCTTCTTCAGCA
GAATCATGCCGTCGATGCTGCCGTACCTCTCCATCGTGCGAGCCCTCTTCTTTGACATCT
CTGTGAGCGCGCACCCCCGCTTCCCCTTGCCTCCTTTCTAGCCGCCACCGTGTTAGGCCG
AAGGACACCGGAGTTGTACTGTTGTGTAGCCGGAGCTGCAGCCGATAGGGCACAGCGCTG
CATGCATGCATGCTTCGGCTAGGTAGAACCCCTCTGCATCATGGCTGCGTAGCATGGCGT
AGTAGTTCCCCACATAGCACCCGTGTGTGTGTGCCTCCGTTGCACTGACGAGTTCGTCGC
CAGCTCCTCTTTTCTAAGTAGGGAAGGCACCCCCTTTATTTAAGGCAACCAGGGAAGAAC
CCCCTTTCTTGGGCGATCCACCCCACTAGCCCGACTAGTCGAAGCGCCGCGCAATGACCG
TGAGGTCTTGGGTTCGAGTCCCACACGCCACCCTTTTAATTCTGTGCTTTTGTTTCTCCT
GTGTACTAATTGGTACGTTTTTATAAGTGGAGTGGTGCCCCTGTTCTAGCAGAAACACTA
CCCTACCACAATGGCAGCCGAGCCACCGCAGCGTAGTAAGTCGAGGGTTCGAGCCCCTTT
TTATTTGGGGATTTTTCCTTTCTTAAGCTTGCCATCATAGATAGCATAGGTACTGTTACT
CCCCTGCTAAAGATGCCAACCGAGCCTAGCTTAGTGGTGCTTGCCTCTTTTGTGTACACA
GAGGTGGTGGGTTCGACCCCCACTACTCCCTGGCCACTTGTCATGCACTAGGTGGCCACT
GGTGGCTATGACCAGTGGGACCCCTTGTCATATTAATATGTTTGAATTTTTGTTTGTTTG
TGTGGTATTTCCTATTTGGAATATATCCAGGCACACGCCTCTCTTAGAACCCTAGTATTT
CTTAGAACTGGTCATATCAGACATGCATTCTATTCTATGCAAAATAAAATATAAGTGAAG
ACACCATATCGCACTATCCTCAAAACCCATTTCGCTAATCTGCAACCTCTGTAGTTGTGA
TCAGCGGATAAACATTGTACAGAACTATGGAAGCATAAGTAGTCAAACAAATATGATTAC
TTTTGTCATGGTCATACATAAAGTACATGGTTAGAGAACGAAGATGTACCGTGCTGCACC
TAGAAGTGAAGTTTGAATCATTTTCACGGGTCAATGGTACAATCCTTAATCATATGAACA
TACTTCTATATAGTAACCAAAATGCAAGAGTTAACTACGGAACCTCTAAAGATTATTAAA
TATGAAACATGATATTTGTACTGCACTTCAAAATGAACAGCAGGGACACAACTGAAAAGA
AAACCTATTGTTGCATCATAGACCAAACTAAGATTGTCATGTTCCAAGCTTCCTAATAAA
TATGGTGATCAGGGGGGCTGCAGAAAATTAGGAACAATAATATATGGATTAATAGGCCCG
AGACATTAATGGGAGAGCACATACAACATATAATCAGGCTGCAAACAAAGTTATAAGAAA
GATGTGGAGAAATATCTTTAAGATGCTAAAGGAAAGTCTAATTACGTAGAAGAAACAATA
CACAATAGGAAAATGATCACAATTCACTCTCGTGCACTGAAACAACAATGCATACACATC
TATTCCTCCCAAATCATAGTACCTTAATTTCAGAAAATAATTACCATTACATCTTATTTC
AGAAAAGGCAATGCATACGATCCTTTTCATTACAACTATATAATTTTTACATTTTATGAA
TAAATCAATTAAATATTAAGCATCCTAGGCTACATGAGAAAGAGTGGCCGACACAGCTTT
ATACACAAGAACAAGTACACATCTTTTGAAATAAAATGAAAAGAATAACAGGCACATGTG
ATGAATGATAGACACATCTGTCATTTCATGTACTTACACATTATGTAAGGCAGAGGTCAT
GATTTGCACATATGGTAATTAACTTTAGGAACTTTATAATCCATCCATTTCTAGATCATG
CACTCAGTTACACTTACCTGCCCACATTGCATTAGTAATTTTTGTAGACATATTTAGTTA
TCTCAGCCTTATCAGTCAAATTTAAACTGCACCATCTAACTCATCTGATTAGACTACTGA
CAAAAGTGATCGTCTCGACCGCTGCCCCGAGGTTGAATCCCCCAACTGCGCTCCGGTGCC
AAGGTACTGGTTCATAAGTCTACTGTTCAGAGATCCATATTTCTTAGGTGTGTGCCTGAT
CATTGCACTCGCGCTGGGTGATGGTTCGTCTTTGTCTAGACGGACTGCTTCGATCTTGTC
GATCAACGACGACGAAGACCATGACGCCGAAACCGGGGGAGATTCGGGCAGTGTGTGGTC
AGCTGCCGACCTCATCTTCATTGATGGACTTGCCAAGGTTCGCTTGTTGCCGAATAGGGA
GCTCACCTTGGAGTACCTCTGCCTCAGCGGTGTCGGGGTAGTCTCGACATGGCTCCATCT
CTTGACGGAGTCCACCGAGGAGGTGTCATCGTCCGATTCCCTGGAGAACGAGGTCGTTCT
CGTTCTCGTTCTTTCACTGACGCCTGACGCATCAATGCCCGCATGGAGGAAAATCTCAAC
ATATGAGATTCTGAAAGAAGTCCCCGGGCTGCCCACAATGTGGTGCATCTTCAGTTGAGA
AGCAATGGCGGACCTCTTCTCGTGATCCCTCGAGTTCGAGATCCCGCCGGCCAGAATCAG
CTCCTTGATGAGTATCTCAGACGATGCAGTGTGCGGCTGCTTCTTCAGTAAATCCAGCGG
GGTCATGCCGTTGCTGTCACGGACGTTCAGGTCAATCGATGGCATGGTCATCAGGAGCTC
AACGAGGCTGGAGTGCAGATTACCAACCACTGCTAGGTGAAGCACGGTTCTTCCATCGTC
GTTCTGCACGTTGATTACATCGTTGACATCCATGATCGATCCAGAGACCAGATGCTTCGT
GAGCTCCATCTCACGATTAAGCCTCCGGAAGCCAAGAGTTCTGAAGCCAGTCAATGCCAT
ATGGAGGAACGTGTCACCAACTTCATTTCTAGCTGATATAAGTGATGGTGATGTAGTCAT
TAGGGCTTCCACCACCGGTAAATGACCTCGGAACGCTGCTATATGCAACGCTGTATTCCC
TTGCTCGTGTACATAGTTGACGATGTCGAAAGCAACAATCTGATACTTCACAACCTGCAG
TAAGAATGTGTTAGTACTGTGCCCAGCAGTTGCTAAAAAGTCCATTAATAGGTTCAATGA
CAAATGAACGTGATGTTGCAGCAAAAGAATGATAACTCTCACGGTGAGACACCATATGTT
TTAGG
