Contig Data
morexGenes
Links



Map Locations of contig_139265 (3753 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_139265

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7443 1 848 bp MLOC_7443.1 Available Available None
MLOC_7442 1 908 bp MLOC_7442.1 Available Available LOC_Os01g03570.1, FRAME:+1, EVALUE:3e-23, 13101.m00306 protein transcription factor X1, putative, expressed





CDS Structure of MLOC_7443






CDS Structure of MLOC_7442






Contig Sequence (3753 bp)

>contig_139265 3753 assembly3_WGSMorex_rbca.fasta
CCCTCCGGATCTTCCTCTTGGAGGGAGACAATGCCAGTCAAATTCAACTCCTCCTGATAA
GGAGTTTAGAAATTGCGACGTAAAATTATCCCGCCCTGTCTCCATCAACGCAATGAAGTC
AAGACTAAGTTCTAACGTTGTTTCCGCAAGGAATTGAATTTTAGCCAAGTCTCTCAAACC
TCTGCTATTCCAAAACATCCCTTTCATATTTCATCGTAAATTTTTTTAGCAGTCTTGAAC
CTAGCACTCCTATGTACTGCAGAGACTGTATAAACCCTCCGCTTTGATTTTCGTTTTGGC
ATTTCAGAAGCATATTTCTGGTCCATATAACCAGAAATATGTTTGCCCCCATCGCTGGAA
TGATCGTTAAGTTGCTGATTATCATCCAGTGCTACTTCATTCTCTGCTAGGTCATCAGGT
GGAACTAAATTTTCACAAAGTAAATTCAGTCCCCCCATATTAGATATCTCCGCATCATTC
ATCGGTTGTACTGCAGCTAAGTTTCTTATAAGATCCAAAGCCCTATCAACTTCTAAGTCC
AGTAAATTGTTAATAGATTTGGAGACTTCCTTACTAGTGTTACCCAGTGTGACCCCCACA
AAGGAAGCATTATCTATGATTTCTTGCGGCGAAAAATGAAGAATGGAGTGTTCTGTATTA
ATAGACATATGCAAGTGTGCAGGAAAATTGATTTACTTGATTTGGTAGCTTGGGGAGAGT
TCAGCCATATGCATAGATTTATGCTACTTCAGTGCTAGGAAAGCAACGTTGTTGAGTTCC
TGAGGGCAAAACTTTATGTTGATGTTAGCTGCTCTTGATTGAGATGTATAGCATCTAATT
GAAAAAAATGGTGATTTGTATCTACTCAAGACTTGCTTTCTTCCATCTTTGAGTTCTCTC
TGAAGCTGATGGTGAGTCCTATACCAATTAAGTTATATGTAATTCATCAGCTTTCGGAAA
TCGGAACATAATACATCTAGCATTTGCCCGTGGAGTAGTGTGTGGGGCAACCAAACTTAC
CAGTAAAACGCTTGCCACTTGGTACACACATTGACGGATGCTAATAACTCCCCACTCCTA
GAAGTTTATGATAGGGACCCCTTATGATATTCCTTAGTAAGTTAGATGTTCATGCTTAGT
TCCTAGCTTGGCTAAGTTAGGCACATCTTGTGTCTTGGTTGTTGAAATTTGACATGATAC
TCCCTCCGTTTCAAAATATAANNNNNTTTAGAGATTACACTAGGAGACTACATANGGAGC
AAAATGAGTGAATCTACATGTCATTCCTGTATGTAGTTCATAATGCAATATCTAAAAGGT
CTTATANNTAGGAACGGAGGGAGTACAATACATGGAGCTCAAAGCTCTGCTGCCATTTGC
AAATAATGTTTTTCCTGAACTTTCTGTAGCATACTTGCTCGACGGGCATGGAAAAGTCCT
TGTGTGTGTATGTTTGATATAGTTTTGTGCAGTGATGCATTACGATATAATGAAGTAGGC
GTGTCTTACATCATCATTTCTAACACACACAAATAGTTTCTGTTCACCATGTTTTTTTGT
ACTGTGTTTACATTTAATGTTTAGGGAACATTTAGACACTATGCCATTCCTGTATGAATA
CTTTGCTAAAATTAACAGCTTAGGCATATTCGTGGAGTGTGAAGGTTTGAAGCTGTTAAT
GCTCTGTTCGTCTTACATGTTTAGATTGGAGGAGAATGGTTATCTAATGGTGCGTGCATT
GATGTTAGGAAATTCTTTGCGAGGATGACGAGAAGCTGCGAGAACTGAAAGAAGAGTATG
GCGAAGAAGTGTATGGCTTGGTAAAAAAAGCTTTGCTTGAAGTTAACGAGTATAACCCTA
GTGGCCGCTATCCTGTACCTGAGTTGTGGAACTTCAAAGAGAAGAGGAGAGCAACTCTGA
AAGAGGCTGTCCAGTACGTCCTGAGGCAGTGGCGCACACAGAAGAGGAAGCGCTGAGCCC
AGATATCTGGATTACTGAAGAATTGAACTAGAAGTGTGCTTCTGTTATTTTCTCATGAAT
GTTGGTAAACGTTTAGTTGTTGGGGTTTCGCTGGATATATTCAGCGTGGTGTAGCATTGA
CATGAATGCTGGTACTTGGAGATTGTGAACCGCCCTTTTAGGAATATCTATTTTGTGCCA
AGCTATGTGCTAGTATGAATGAACGGCTACTAGTTTGTTGATTTCAATGTATAATGTATG
TGATGCATGGTGTATGCCTAATTGTCGTCCGGAAGCTTTCACACAGAATCACCTCGTGGG
GAGGCAAAAAAAAAAAAAAAAACACAAGCGTGGAGCTCCATGCATGATCGCGCCTCCAAG
GACGGGTGCGATGCTGTCACCGCGGTCGCCCAAACATGAGGTCCACCCTTGCATTTCTCT
AGGATTGCCCTTCACCGTGCACATACCCGAACCCGAATAGGCCTCGGGGTAGGCCAGTTG
GACCGGGCGCTCTGACCTGCTGGTGAATATAACATGTCGTCGTGGCGACCTCAGTCGACA
CTGGATGAGCAGGGCATAAGAGGACTGGATCCATGGCGAGGCAAACTAAATAATTCAATA
TAAAACTTGGTCTGTATATATTAATGAAATAAAAGTGAATGGAAAATGAAATGTATTACT
GTCCATCCCTTTGTCAATGATGCTCAATGAGATATTTTAAAGTTGACAGTGGGTGTTTGC
AATTTTTTTTAAAAGGTCTAATTCGGTTAGGGTCTCTAGCTGGTTTGACACGGCTACCCA
CATTGTCGTAGAAGAACTTCAAGTTCATGTCCCTTTCATCTCCGATAATCATATTATGAA
GAATAACATAGCATGTCATGATGTTTTTCAAAAATCGTTTGTCCCAAAAAAACAATGCCA
AATTCATAAATCCTCGGATGCTACAGCCTCTAGCACAATTGTTGCATCACGAAACTTGCC
ACAATACATTCCCTGCCATGCCTTTGGAATTGTTTTTCAAATCCAATGCATACAATCTAT
GCTTCCTAGCATGCCACACCAATCTTCTATCATTAGATGCCATCATTTTTTTTGTGTCTT
CCTCGTCGGTGCCCGAAGATATTCAGGACCAAAGACACGGACGATCACTTTGATAAACCT
ACGCACTGACTCAATTGTACTATCTTCACCAATGCGAAGGTACTCATCGGCATAGTCAGC
CGGAATGCCGTATGCAATTACCCGCATAGCTGCTGAGATTTTTGATATGCACTAAATCCC
TTCAAGCCCGCGACATTTCTTCTTTGAGTAAAATATCGACAATTGGCCTCGCGAGCTTGA
ACAATTTTCACAAAGAGGGATCGGTGCATACGGTACCTTCTCCGGAAGAGGTGCGTTGGA
TTGTCCGCGAAGTAGTCTTGCATCAACATCTCGTTCCAGAGATGGCGATTTCGAGGAATG
CAAAGACGGCCGACGGCCAATCCTTGCCGCCTCTTTTGGTTCTCATCTTCGTGCTCCTTC
ACGACAAGGGTCATCACCAAAGTCTGTTGGCGAAAGGTGAGAAGCATCGTCTCAACATCT
GAGTCATCCGAATCGGATGAATCGTCAAGCAAAAACTTCTCACACGGGCTCAATTCCATC
TCCGGCGGTGGCTCTCCGGCCACGGTGGATTGGCGGACCTAGGGAGTAGGTGCAACGACT
CGGTGGAAGAGGGCAGGGGCGCCCTCGCGGCATGATTCCGCCCGCAGATTTGGTCGGAAT
CACCCGCGTCGGACGGGCGGAACCAATGGCGGG