Map Locations of contig_139199 (5264 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_139199

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7424 1 1556 bp AK361903 Available Available None





CDS Structure of MLOC_7424






Contig Sequence (5264 bp)

>contig_139199 5264 assembly3_WGSMorex_rbca.fasta
TGTTTGGTTGCCTCTAAGAATTGTGATTTTAAAANNNCAGTATTGAAAAAACTGTGGTTT
TTCTCTGCATAAAAAAAAACCCCAGACCTCTTTTTAAAAAACAGAGAAGGCGAAAAGAAG
GGGTGGGACGTCGTTATCTTCTTCCCGTATACTTGCTCGATCTAAACTGTAGTAATATGT
GGCGTAATCAAACAGTTTCTCTATATTGTGAATACTGCAAAAAGTGTTGTTATATTAAAA
CCATGGTATTTTCTATCTACACGTAAAATTACTGCAGTTTTTAATACTTTAGTTTTTTTA
CTACTTTGTTATCAAACAGGGCCTAAGCTGTGACTATTAAATTTTGACTTGACAAAGTGT
GGGTGAGAACGAAACAGATCCTAAATGTATGAAGGATGAAACTTGGGTGTTTATTCTGCC
TTCCCCATCCTCTCTTTGGAACCTCCCTCCTTATTCAGCAATATAGCTGCTATTCTGGAT
CGTGCCTAGATCCTTACAGTTTGACTGCATGGTATGTATTAAAAATTCTGTTGGATATAA
ACAATACGACAAGCTTCATGACAACTTAACATAACTAGACGTGTACGCAAGCACAACAAC
TAATTTTGGCAATTGGGCGAATTTTCTTTGGCAAGCCATATTAAACAAAAATGGCAACTC
GAAGTGACAACCAAACTGTAAAAAAGGCTGACAAGCCATACAGAGGTAAAAAATTACACC
CCGTCAACAATTAAAACTGTCAATTAGAGTGAGAAAATTTGGCAAGCTATACGAAATAAA
AATGACAACTCGGTATAATTAATACTAATAACTAGAGGGTAATTATTTTTGGCAAGTTAT
ATGAAATAGAAATGGCAACTAGGCACAATTAAAATCGACAACTAGTGCGCAAAAAAGTTG
GCAAGATATATGAAATCAAAATGACAACTCAATACAACTAAAACTGACAACTAGAGGTAC
AAAAAATGACAAGTTATATAAAATAAAATGGCAACTAAGCACAATCAACACTCACAACTA
GTGTGCAAAAGGTTGGCACACTATGTGAAATTAAAATGAGAAGTTGAGACTACTAAAACT
GACACCTGAAACAAATCATCTTGACAATTATGTATAAATAACATGACAAGTTATAAATAT
ATGCATAAATAAAAATATTAGTTGAGTATATAACTATAAAGTCGAATATAATTTTTCAAA
TTTTGTGATTAGGCAAACACAGATGAAAGAAATCAGCATTAGAGGGTATTTTTAACGGTT
GTAAGAAAAAGATGAAAGCGACAAGAGAAGAGTAGGTGGCACATATTTTGTAAGTAAAGG
CCGAAAGTATGTCTAGGCTGTGGTGACGGAGGCACGGAGTGCATGCAGTTTCCACATCGG
GCCCAGTACGTCACTTGGGCTTTTGATGCTTTATCAAGTGCGCACACCCCACACAAATCC
GCGATTAGGGGAGTCCTTAGCGTGGCCGCCCCACAGAAAGCCCTGCATGCCGCTACGTAG
TCAGGTCCATAAAAGTTTGCACCTACGGATTGCCTTCAAAAGAAATTGCAGGTGCCCAAT
TGCATTTTAAAAATATATTAGAATATGACGAAGAGACACCGACATATGGGCCCAAATGTG
AGTTAAGATCAAACAAATGGTCAAACAAACGGTTCTCTTACGTGCGGGCTCCAACTGTCA
TAATCGTGGTCAACTTTAAAGTACTCGACGATTTGGATTTTTTGAAACAACCTACCCCTA
AGTTGGTAGTTGTTAGCAAAAAAAATCCGGTAGTTTTTCGGAATCTAACCTGAATTGTAG
TAGTTTTATGCTATTTACTCCACTTCGGTGATCAATCTCCAGATCTCCATAACATTTCAA
TGATTTTTTTCCGGAGTAACCAATGATTGTTACGTACTACTTCCTCCGTCTCATAATATA
AGAGCGTTTCTAACACTACGCTAGCTAGTGTTAAAAACATTGTTATACTCCCTCCGTTTT
TTAATATAAATCTTTTTAGAGTTTTCAATAAAAAGTTATATACGAATGTATATAGACATA
CATTAGAATATAGATTTATTCATTTTTTTACGTATGTAGTCTTTTAGTAAAATCTCTAAA
AAATTATATTTAAGACCGAAGAAAGTATTGTTGAACAGAGGAAATATCTCTGCTCATTTT
TATAAGGCGTTTTAGACATTCAGGCACTGTCCAAAACTGTGTACATCTACCAAATAGTAA
CAAATTTTATACACTCCCTCCATTCATTTTTATAAGACGTTTTAACGTTTAAAAAAACTT
CTAATAGAAACGAACGAAGGGAATATATAAAAATGATTATACTTGTTTAACGTTAGCAGT
GACCGTACGCTAGCGTTATAGCCATAGATCACAACCCAGTAACTTGCAACTTGTGCACGA
CAAGAACAAGGAAACTTACAGGAGATCAGTTATTGAAACTTTCCGATTTTAGTAATTAAG
GAGCATGCGCTGGAAGATCCTGTTTTTCTGTTGCCACTACTCGAGCTGGAAGAGAGGCCC
TGTCCATTAGACGACAGCTGCCAAAGACAACTAATGCCGCTTGCTCCAGCTGTGAATTTC
TGTTTCAAAACGGACGTCGTTGGGATATGTTGGGTTAACCTTTATATATATTACAAAGTA
CGAGTATATAATAACATCAAATATTTCAATCTTGTGCTCAGTAATGCCAGATTTTGGCTG
TTGTCCGTCGTGCATGTGAACGCCAATTGGACACACAAAGAATGCGTGAGGGAGCAGAGA
GCATACAAATTGTACTCGTTAATTAAGGTGCATGCACGCTGAGAAAACTATTCTATACTG
TCACTGCCGTTTCATCTTCATTTGTTAAGTTCAACTGGTCAGTGGTCACCGTTCACTACT
GTAGCTTGACACATGCACGGCCATGCTGAGCTAGGTCTCCTATGGATGGGTGAGTAGGAA
TGAATATCTAACACCCGATTAAAAGTAATCCCTTGTCGTGATCATGCATGGAACGGAGAC
TCAACGGCACCAAGAGCTGAACAATCCATATTCCAACCAAAGGTTTCCCACCAGATTTTC
CACATTCATCTAAAAATATCAATCACACAGATACAGTCCACAGATGACGAGCTTTTTCTC
GAGAAAAATCTTAAACAAACACAAGTCAACGAATCTCTACTCAACAGCTAAGCTAATCAT
CCCGTTCACAACTTGGTCTTGAACGGCACATAGTTCTTGAGCGACTGGGTGATGCCCTGG
ATGGAGGCGACGGTGACGGCCACCGTGACCGCGAAGCAGGCGAAGCTCAGGGTCTGCAGC
GCCACCCACTTCCTGGAGTACTTCTTCATCTTGCTCTGCGAGATGTACATCTCCACGGGG
AAGTAGACGGTGAGCGGCCAGAAGCCGAGCGCGCCGAGCAGCCCGAGGATGTCGTTGAAG
AAGGGCAGCGAGATGGCGAGCACCGTGCTCACGATCACGAACGCCGTCCTCCACACCAGC
CTGAACATGTTGAGGCTGAACGTGCCGGAGAAGGGGTGGTACTGCCGGACGACGAACTCC
GAGTTGGGCCACCGCCCCGCGGCCCAGCTCTCCACGGCGGCGTAGATGGGCTGGCAGTAC
ACCTGGTAGGCGCCCACGAGGTGCACCACGATGCACACGTTGGCGAAGTCGATGAGCCAG
AAGGGCTCGTAGAAGCCGAAGCCGGTCAGCATGTTGCCCGGCGCGTCGTTGCCGAAGGCC
GAGTAGCCGAGGCAGCCGCAGAGCATGTAGAAGGCCGTGGTGGTGGAGACCCCCATCAGG
TTCGCCTTCCTCATCGTCTTGTTCTCCGCCGGTGGCGCCTTCACCGTGTCCTGCATTAGT
TTCCACATAGACGCCATTAGTGACCGTGACTTATGAGCACGAACGTGTATGTAGTACTGA
ATCTTTGTGACCTTCATTCATACCTGGATTTCTATGAGAACCATGGAGTATGAGTAGGCG
AATGCGATGTTCCCGAGCGCTTGCAATGTCAGCCATATCTTCTGGGCCGAAGTGACGTCC
ACCCCAATTTGAGTGCCACCAATGGTTGTCTTGCCCGTAGGACCTGCCAATTGCCAATTA
GGTCGAACATGCAGACACAAAGTTACACCGGGTAGGAGAGAATGGGTTAATGCATTGATC
TCTTGGTGGGAAGGTTCTAATTTGATCCTACCTTTGATGGTCTGTGCCAAGGAGAGGCCA
ACGCCGATGGTGGAGTAGGAGAAGGACATGACGGCGGCGAGCATCGACAGCCAGGCCATC
TCGTGGAGGTTGGGGAGCTGGGAGAAGACGATCTGGGAGATCCCAAACACGACCATGTAC
ATGGTGGTGTACACGCCGCAGTCGGCAGAGTGGCCCTTGCTGTGGAAGCAGTTGGCCTTG
TACAAAGCCCTATAGGATCGTCCCCCCAAAACCACAAACCAATGAGTTCAACTGATCGAT
CATCATGAACGGCATACCATCAATTAGCTTAACTGAAAATTACTACTCGTACATGAGAGC
AAGAAGGTCGTCAGACTGACTTACGCGGCACTGATGGATGCTGTGATGGTGTACCCGATT
GCAGTCCCAACAAGATTGACGTACTGACAGAGGCCACAAAACCACACCTGCCCTTTACCT
GCATGATCGATCGAGCAGGTAGAAAGACAATGTAAACATTGCCTGAACTCGCAAAGAATC
TAATGGCGTGTTCACGCGACAGGCATGGGGAGGGGAGGACCGGAGGAGGGGGAGGTGTGC
GTGCGTACGTACCTAGGAGGGACCCGACGGCGTCCATGTAGGTGTAGTTCCTTTTCCCGG
CGACGGCGTCGTCGCTGCGGTAGCAGTCGCCGAGGAGCACGGAGGTGTAGTAGGTGATGA
GGGCGAAGAGGAGGAGCGTGGCGGGCCCGGCGACCCATCCGAGCTGCGCCACGGACCAGG
GCAGCGACAGCACGCCGGAGCCGATCACCGCCGTGATCACGTGCGCGCTCGCCGTCCACA
CCGTCCCTGCTCAACCAACCCGCTCAGTCAACGAAAGTCAAGATTGATCTGCCCCAGAGC
TCCCGCGGCGCATGCGTGCATGCCAGCGGCGCGATTCGGAGAGAGAGAGAGAGAGGGAGG
GGTGGGTTTCGCTTGCCTGTCCTCCTGGGCTTGCCGTCGTCGTCGAGGGAGTAGCCGTCC
GCCGCCTCGGGTAGCCTCCCGTTTCGCCCCCGCCCCGCCCTGGCTCGGCCCCCCCCCCCC
GCCAGTAGGGGCAGGGGAGGGCCGCCGCCCCCCCCGGCGCGGCC