Contig Data
morexGenes
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Map Locations of contig_139161 (4919 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_139161

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7404 2 2149 bp MLOC_7404.2 Available Available LOC_Os05g36050.1, FRAME:-1, EVALUE:0.0, 13105.m03778 protein serine/threonine-protein kinase, putative, expressed





CDS Structure of MLOC_7404






Contig Sequence (4919 bp)

>contig_139161 4919 assembly3_WGSMorex_rbca.fasta
ATATATATATATAATATAATATATATAGATTTTAAAGACCGCTTCATCTAGTTTTTTCGA
ATGAATTGCATGCAGCGTTTTATGTAAGACAACAATACCCTCTAATATGCATTTTTTCTT
AAAGCTACTGCACACCAAGATATGGATGAGGAACGATCTGACACCAGAATAAAATTCACT
ATACAACAGTCCGGCAAGCTATGTCAATCACAGCGGGGAACACCTACGAAGAGCAGACAA
ACTGGGGGAAACTTTTCATCGAGGATATGCTCACCTACACCTTTTCGACAGATCAAGCAG
GGCTTCCACAAAACTTACGAGGCAGAAGAGCCAGAGGAAGAACGACACCGACCAAAACAA
GTTACAGCACCGCGTTTCCAAGCTCCCTAGAGCTTACTGAACGCAGCAGGGTTGCAGCAA
CCATGCAAGCAAAAACCTACGACGTGCGAGCGAACTAGCCCTACTGGAACCTGGACGGCG
TAGTGGCGGCGGTGCTGGTGTTACCATCGTAGCAACTGCTGTGGCCTGATTCCGTCGCCG
GCTTCCCGGGAACAACCCTTGATTTCTCCAGGGGGCTGCCTTGGCACGGCCGCATAGTCC
GACGATCCTGTGGGCAGATGAGCAAAAAACTGTGAGTTTAATGAGGAGTAAGTCGAATTT
CAGACTTAAGGCCTAGTTCCTGAAACTTCGGTTGAGATGCAGAATGACAACAGGATGGCA
GAAACATATACTGAAGTTGCCAAAACAGAGCACGGTTCATGTTAGTAAACTCTAGTTCAA
GGCCCCATCATAATTTTAATCAGAATGATCAAGGTGATATGGTGATCTCGAGGTCATCAA
TAGTTCTTTTTCGAGATGACAGAGTAGTAATTAACATCCCCAACGGCAGTTCAGAGCAGA
GTCAGGTGACATGGTGATAACTTAACTAATCTCGAGGAATCTGCAATGAAGGCTTGATCC
AAGGTCAGACATGAAACTAGTAATCAGGACCAACACACTGCTATTTTAATCCTGATGTAC
CTGCTCTGTCCATTTCTCCGGACTCAGATGCAGAGGTGTCCAGTTTTCAAATTATAGCAA
GCATTTACACATTGATTGTAACTGGCACACACATACTTTATGACGGTTACCCGGCAAATG
CGTGGATCTCGCCATATGTAACTTGGAGTATGTTGCTGGTAGTATGAGCAAATGAGCAAT
GTGATGGACTTGATAAACAAAGAGGTGAAGAAGCGGCGGGGCTCACCTCTCGGTACGGGA
AGTCGTCGACCTCGAGCATATGGATGGCATGCCCCATCTTGGGCCGTTTGTGCGAGTCGG
GGTCGACGCACCTCAGCGCGACAAGGAGCGCCTTCTTCAGGGCCTTGGAGGTAGGCTTCT
CCGGCAATTTCGGGTCCAAAACCGCCTCGTAGTCCCTGTTGCCCACCATCTTCTTCAGCC
ACTCCACGAGGTTAACCTGCAGAGAAATGCGCCGGCAGACAGGAAGCTAAGGCCAAGCTC
ATCCTGCACGCATGACAGGCCAAAACAAACAGACGCAGAGCCATCCTACCTCGGCTGGAG
GCCTCGCGTAGTCGACCGGGCACCGGCCGGAGATGATCTCCATTATGAGGACCCCGAAGC
TGTACACGTCGCTCCGCTCGTTCAGCATGCCCGTGCTCGCGTATTCCGGCGCCACGTAAC
TGCCAGGAAGCAGAGGGATTGAAGAAATTCAGACGCAAATTCAGCAGTTCAGTTACATGT
TGCGGAAACGGATGCAGTTCAGGCGACGCACCCGAACGTTCCCATGACCCTGGTGGTGAC
GTAGTTGCTGTCGGAGCCGAGGAGCTTGGCGAGGCCGAAGTCGGAGACCTTGGAGTTCCA
CCGCTTGTCCAGCAGTATGTTGCTCGACTTGATGTCCCTGTGCACCACCTTGGGCTCCAG
CCCCTCGTGCAGGTACGTGATCCTGAAATCAAACCAGATCGCCGCACTTCAATTCGCAGA
TCAACCAACCAATTATCGCCGGGCGTACTCGGAGAATCAAAGGTGCTTAGGTGCATGAAT
GAAACAAGTAAAACACTGACAAATAAGATGATGATGACGATGATATATATGATGATAGTT
CACCCACCCTTTGGCCGTGCCGAGCACGATGTCCATCCGGGCGTCCCAGGAGAGCGGGCT
GACGGGCCCGACGTCGCCGTGAAGCCACTGCTCGAGGTTGCCATTGTCGACGTACTCGTA
CACCAGGATCCTGAGACCACAAGCAAGCAAGTGTCAAGTGCTGCGTGGTAGGTGAGATTG
ACAAGAGTACGTGTAGGCACGACGACGACGCCGATCCATGAGTGCATGTGGTGTGTTGGT
GGGTACCGGTGCGCTCCCTCGACGCAGTAGCCCAGCAGCCGGACCAGGTTCTTGTGGCGG
ACGCGTCCGATCGCCTCCACCTCCACCGTGAACTCCCGCTCCGCCTGCCCCCTGCGCCGG
CCATCGACATGAGTTTTGTCACGGAGCAACTAGCTTGGCGCAACGAAAACGAAGAGGAAA
GGCACATGCTCTGTTGCTCGTACGCACCTGTTGTTGAGGAGGTTCTTGACGGCGACCTGG
CGGCCGTCGGCGAAGACGCCCAGGTAGACGATGCCGTAGCCGCCCTCGCCGACGACGCGG
TCGGGGGCGAAGCCGGCGGTGGCGTCGTCGAGCTCCCGGAGCGTGTACCAGTGGCCCCAG
CCGAGGTGCGACACCTCGGGCCCCACCCCCAGGGACGACGCCGGGTCGGACTGCACGGAC
CCGGCCTCCGCGTCGGCGTGCGCCACCATGCGGCGGTCCTTGCCGGCCTCGATGTGCACG
CGCTGCGACCCGTGCGCCACGCTGCCGCACAGCGAGTCGCCGCCGTCCTTGCTGCCGTCC
TTGAGGTACGCGGCGCCCATCTCAAGGTAGTGGCGGAGGGAGCCGACGTGGACGGCCACC
TCCTGGATCTCCTTGGAGACGGGCGGGATGTTCACCGCCGGCGAATGCGGCGCCGGCGCC
GCGGCCGCCTTCCCCTTGGGACGGCGCCGCCGAGCGGCCACCGCGAGGTGGACCGAGATG
AGCGCGAGGAGGAGCAGGAAGGCGGCGCCGACGGCGAGGCCGACGAGCACCCAGAGTCGC
AGCCCCAGCACCGGCGTCCTGCGCGACAGCTCGTTGGTCAGCAGCGGCGGCGGGGGCGGC
GCCGCCATTGCGCGCGCGCTCCGCTCGCGCCCGGCCATCTCCGCACGCAGTCCCTCCCAG
CTACGCTCTCCTGGTCCTGCAAGGCTCGCTACCACCGCATGCTAATCTTGGTGCCCACCA
CCAGCAGCAGCAATGGCGCCGCAGCTGCAACGCTGCATATAGTGTGAGAGAGTGAGAGTG
TGAGAGCACGACGAGAGTGTAGGTAGCTCTCTCGGGACCTTGGGTGGTTTCTGCGGGCCC
GGTGGGGGCGCTGGGCACGGAAGGTTGTCTGTTTCTGTGGCCTGGGCCCGCTGGCAGGCC
AAGCCTGGTTTAATCTGACACGAGGTTTTGTAACTAAACAAAAAGCTCAACAGTCCGAAG
CAATGGATCTGGGAGTAATTAAAGTCGTGATCAACGTCCGGGATCCGGCTGAAACGTGCA
GTCGTACCCTGTCTTGTCTGTACGTTCGCTCGGCCTTATCTCTCTCTCTCTCTCTCTCTG
TACTCCAACACCATCCGTGTCTCCAGCTCGATCTGGACCGTCGGTTAACGGATCGGGTGG
ATGGCAGGGCCTCAAGGGCGTCTCTGACCCCCGAGTCCAGAACGAGACAGTAGTTCCGGG
GGAATCTCTGGCCCTGCTTGCCGACGCCTCTGTTCTGCCTGCTCGCTCCCTTCAGCTTCA
GTAAAAGTTTTACTGTCGTTTCGTCCTCATCTCCATCCCTCTGTCTGGCCTCTGCATCTT
CCCCTCCGAGAGGGCGTGGCTAATTTGCAATATTCCGATCGCCGACCAATTAAATGAGTT
TTCCCGTTAAACCAGGTAAACAAAACAAAAGTCAAAGGGAGTCATTATGACAGGAGGACC
AGTTGCACAAAGTTGACGCCCGGTACTTATAAGATGCCAGAGTACCATTAGTGTAATGAT
ACTCCCAAGCATCTGCCCGTGCATACACAGTTTGCTGTTTAACTTGCCAATATAGAACGT
GTGTGCGTGCATGTGACGGTGCAATGCACCGAGGGGGTGCGTACGAGCACTGGCAATGGA
AAACAGTTGGTGCCTTCTCCTTTGTCCCATAGCCTTCCTTCTTTTTTCTATACATGGACA
AACCCTTTTCTCCCCCACGCTGCAAATCATTGAGAGGGAAAAAAGAGTGGCCAGACGTAC
AGACGCGCCCCCATTTTTCTACTCCGCTTATCCGCCCTTTTCCCCGTCGCTCGCAAAAGA
ACTCCGCCCGACCATCCATGCGCCAGCGAGCAAAGCGCGATCCAGGGCCGCGTCTACCGA
CAGCCCCGGCCTTCTTTCCGGCGTGCCATATTTGCGTGACTCGCGAACCCGTCACGCATC
AGTCTGCTCGCGCGAGGTTGGCTGTGGACGGGAATCTTTAGCCCATTTTTAGACTCCTCA
ATTGCGGTCCGTCAAATGACACTACCGATCCCATCTTAAATAATGTATTTTACATTCGGA
CACCTTAAATTTCATATCTTAAATTCATATAATTCATGCAACTACTACGTCGACATATAC
ACATCGTTCGGCTACCTCATTACTGTTAAACATGTCATCGAGCTATCAAAATTTGACATG
TTTGGCATCATCTACGACTGCCCTTGTCCTTCCCGACGTCCTTGACGTCCTTGTCGTGGA
AGTATCGGTCGAGGACGCAATACGGATCGAGACGGGTCTGCTCGTCGCCGCCGCTAACCT
CCTTTTCCTTCTTCGATGGCAGTCCGGTCATTACACGGACCGCCCGATTCTGCTCGCGG