Contig Data
morexGenes
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Map Locations of contig_139121 (3884 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_139121

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7384 1 1603 bp MLOC_7384.1 Available Available LOC_Os03g50885.1, FRAME:+2, EVALUE:0.0, 13103.m12851 protein actin, putative, expressed





CDS Structure of MLOC_7384






Contig Sequence (3884 bp)

>contig_139121 3884 assembly3_WGSMorex_rbca.fasta
TATGTCTGCGCCAAGTGGTGTTGGGCCATCTGAGTAGATGGCAGCTCGGGTATCCGTCTG
AATAACAAAGTTATGTCCAAGTAGATTGGTAACTATGAGATTTCACATTGTTATTTGTGG
GTCCCGCATAACTAGGAATGTACCCTTCGTGGGTCTACCTAGCTATTATATATGTCCTCA
AACCAGAGCAAAAGACGATGTTCCATACGACCTTTCCCGCTCGCATGTGCGGCTGTATGG
ACTGCCAACGAAGGTGCCCGATCCACCTGAACAACCTTTATAAATGGTCTGAAGCCAAAT
GAGCAACAGAACATCGCCGCACAAGCAAGTCATTGTCATCTTCACATTTCCCATCTCCAT
CAACCCTAGGCGCCGCCATTTAACTTATGATGAAGAATGACATGCATAGATGTTGGTGTG
GTATGGCTGCATGTTTAGAAGAAAAAAAATGTAGCTATTTAAGAATATATTGGATATAAT
GATATGAACAAGGACCTTTGATGTGCATACACACCTTATATGAAGAAATAGAATAGTAAG
TAAATGAAAGTAAAATTAATCTGATTTTTATTGTAACAAATTTGAACTTCCATTGCACTT
GTAAAAAAAATTCACAAAAGAAAAAAAAACACCGTCGACTTATTTTTGTAAATTTTTTTT
GCCAAGATAGTGTGAATAGTGATCTATACATAATAGCATATTTTTGTCCTGAAGTGAAAA
ATAACATTTTAGTATATAAGAATTTATATACTAGTGCAAAAGAAAGCCATTTTTTATCTA
GAAAAAACTCGTAAACTTTTTTGACTTTTGAAAAAACCTCATATATATCAAGAGTACATA
GACCGACCGAGGAACCAAATGAAATTTCTTGGTGTGGAGGTGAAAAACGTACGTATATAT
GCATATATAGTGGGAAGGGAACGTAACTGCATGCTCAGGAAGGAAGGAAAGAGAAGAAGA
AGAAGGTAAAAAGTGAAAAGAGGGTTGGCGATGGATGCATGCATGCATGTACTCGTATTG
GATTTGTGAGGCTGAGGACCCTCTCCTAGCTTTAGCTTGGCGTTCGTTCGGTTTCCATGG
ATGCGACGAGTGCGGGCCTCCGCTTCCACCCCCCATAAATACTACCTTGTCTCGTACCCA
TCCTTCACAGAATCGAAGGCTTCCTCCATCAATTGTTAGATCCATCTTCGCAACAAGACA
AACAACGTACAAGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTCGGGCCGTCCGGAGA
AAGAAGAAAGGAAGGAAGAAGAAGATGGCCGACGGCGAGGACATCCAGCCGCTGGTGTGC
GACAACGGAACCGGTATGGTGAAGGCGGGGTTCGCCGGCGACGACGCGCCGCGGGCGGTG
TTCCCGAGCATCGTGGGGCGGCCGCGGCACACGGGCGTGATGGTGGGCATGGGGCAGAAG
GACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGTGGCATCCTCACCCTCAAGTACCCC
ATCGAGCACGGCATCGTCTCCAACTGGGACGACATGGAGAAGATCTGGCATCACACCTTC
TACAACGAGCTCCGCGTCGCCCCCGAGGAGCACCCCGTCCTTCTCACCGAGGCTCCACTC
AACCCCAAGGCCAACCGTGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCC
GCCATGTACGTCGCCATCCAGGCCGTCCTCTCCCTCTACGCCTCCGGACGAACCACCGGT
ACATACATCATCTTCTTCCCCCTTCTTCTTCTTCTTGTTGATTGATTCCATGCATGCAAT
GACGATGACGATTCCAATATTAGGTATCGTGCTGGACTCTGGTGATGGTGTGAGCCACAC
GGTGCCCATCTACGAGGGGTACGCGCTGCCGCACGCCATCCTCCGACTGGACCTCGCCGG
ACGCGACCTCACCGACCACCTCATGAAGATCCTGACGGAGCGCGGCTACTCCTTCACCAC
GACGGCGGAGCGGGAAATCGTGCGGGACATGAAGGAGAAGCTCTCCTACATCGCCCTCGA
CTACGACCAGGAGATGGAGACCTCCAAGACCAGCTCCTCCGTGGAGAAGAGCTACGAGCT
GCCCGACGGCCAGGTCATCACCATCGGCGCCGAGCGCTTCCGCTGCCCCGAGGTGCTCTT
CCAGCCATCCTTCATCGGGATGGAAGCCGCCGGGATCCACGAGACCACCTACAACTCCAT
CATGAAGTGCGACGTGGACATCAGGAAGGACCTCTACGGCAACATCGTCCTCTCCGGAGG
AACAACCATGTTCACCGGCATCGCCGACAGGATGAGCAAGGAGATCACCGCCCTCGCGCC
CAGCAGCATGAAGATCAAGGTCGTCGCCCCGCCCGAGAGGAAGTACAGTGTCTGGATCGG
AGGATCCATCCTTGCCTCCCTCAGCACCTTCCAGCAGATGTGGATCGCCAAGGCCGAGTA
CGACGAATCCGGACCATCCATCGTCCACCGGAAATGCTTCTAGAACCCTTCATCCATCGT
CCATCTCCCCCTCCCCTCCCCTGCATCATCATCGTCATCGTCATCGTCGTCGTCATCACC
ACCACCACCAACACCATCATCATCACCAAACAATACAAAACAAAAGTAAAGGCGCGCCGA
TCATGGGAACATCACTACTGTGGTACTGCCGGGGCGCCCGCTCGATCGACCACGTCTCAT
CGTCGTCGATGATCCTCTTTTTGTTTCCCTTTGTTTTTTTTCTTTCTTGACAATCTTTTT
ACATAAATCATCTTCTTTCCTTTTTGTTTTCTTACTTCCATTGTAATTAATTGGAGATGC
TATCCATGCATTCAATTCCATTGTCATTTGTTTTGTGGATGACGTGCACTTAAGCGGTAT
GCTTGAATTCAATCTAATCTAAAGGCCGGCTAGCGGCCGAGATGATTACTATTGATTTTG
ATAGAATGGCTGCCTTCTCTTATTTTCAAAACTCGTAAGGAAAAAATAAATGGATCTTGT
CATGTACTAGTGCAGTTGGGAACTTCATTGCATGAATATCTAGTTTCATATCTAGTTAAT
TAACATCCAAATTTTCAAAACTAAGAGGTAACAATTTGGTGGAACGTCTTATGTTTGTTT
ACAAAGGGGCTACTAAATACTGGTAGTATATCTGAACTTTTCAAAACTCACAACTTGTAA
TTTTCTTTGCGATGTGTACTAAATATTCAAATGAATTTGTGGATGACGTACACTTAAGCG
GTATGTTTCACTAGTAGAAAATGGGGCTATAGTCCCGGTTGGTAAGGGCCTATAGTCCCG
GTTCTCCAACCGGAACTATTAACTTGGGACTAAAGACCCCCCCCCCCTTTAGTCCGGGTT
TGCCACAAACCAGGACTGAAGGCCCTCCACGTGGCTGCTGGGGCTCGAGGACCTTTAGTC
CCGGTTGGTGTTACCAACCCGGACAAAAAATATATTTTTTCGATTTTTTCTAAAAAAATA
TATATTCTGATATTTTGGTTTAAAAGTAAATTCATTTTTTTAGTTTTTTATGATTTTCAA
ATCTTTGAAAATTTAATGTCTAATCACCCCTACTCACTCCTCCAGCGTGGATCACTCATT
TTAAATCGTCTAACTTCCCGTCCAATCACTTCACGGTTTCCAAGTCTCCACTTGTTGTTT
TTTTGACAACAGTAAGCTATCAATCCTATTAACCCTTAGGTCTTGATGCCACATGATTTA
ATTTTTTGAATCCCAAACAATTATTAAAATAAAAAATAATAATTAATTGTAAAACTTAGA
GCTATAAGTACGTGAGACAAAAAAGGAGGAGTTGGTCACGTCGACTCGACGTATCAAAGG
GCTATGGAGATGCCCATCACTGGATATCAATGTGAATGAGTAGG