morexGenes - Barley RNA-seq Database

Contig contig_139014
Source Contig contig_139014
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_139014 (8776 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_139014

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7321	2	2262 bp	MLOC_7321.1	Available	Available	LOC_Os10g34720.1, FRAME:+1, EVALUE:0.0, 13110.m03100 protein LOI1, putative, expressed
CDS Structure of MLOC_7321

Contig Sequence (8776 bp)

>contig_139014 8776 assembly3_WGSMorex_rbca.fasta
AAGTAGAGATTATAGCAGGGAAGAGAGTTTTTACACCGCTGCATAGAGGAGGAGATAGTT
GGTGGTGATGTCAGCGAAGTTGTTGGTGTAGATCACCGTCACGATGGTTGCCCCGGCAGC
GCTCTGGCCCCACCGGGAGAGAGGAGAGAGAGAACCCTCCTTCTTCTTATTCCTTGGCCT
CCTCCCTGCGTGGGAGGAGGTTTCTCCTCTCGTCCATGGTCGATGTGGCACTCGGAGAGC
AACAACACCTCTGGGATTGGATCTCTCTGTATTTCTCTCCTGTTTCCACGACCAGTTTTC
TCGCTCTTCACCGTTTATTAAATATCAGTAGATCCGTAACTCCGATCGGGCTGAAATTTT
GAGGGAATTTTTATCGGAAAATTATCTTTCTTGCGGCCAAAGGAGAGATCCAAGCGATTT
AAGGGCTGGCCACAAGCTATCAGGGCGTGACCCCACTCCCTGTCCGCGCCCTGTTAGCTT
GTGGGGCCCTTGGGCACCGTTTTGAGTTGATTCCCACTCCCAAAATTCATATATATTCCA
CAAAAAATCTTCATAAATTTTAATTACTTTTGGAGTCCGTTTGATATGGATTTTCTGCGA
AACAAAAAACAGGAATTGTCATTGGGCAGCGGGTCAATAGGTTAGTGCTCAAGAATAATA
TAAATTGGTAAATAATTACTCAAAAACTTTCCTAGAATGATAATATAATAGCATAGAATA
ATAAAAAAAATTATAGATACGTTGGAGAAGTATCAACCTACGAATGGTAGGGTCATGGAC
CGGACATTCACGGCCCACCTAGGGCCCACATGGCCGTTAAAGTCTCATGACTATGAATGC
ATTCACATGCATACTTTAGATCCACTCAGACCCATGGGGACACTCGGACGTCTTCTGGTC
ATTCGTCCAGACAACATCACTCGGACAGAGACAAGCATGGACGACGTGAGAGATACAACG
ACTGAGGGACTTAAAGCAATACATGAAGTGCAGTCAAGACTAGCATTACTAGTAATGACC
ATAGTTAGATCTGCAGTTTCTAGTAACGCTTATAGTTACTCTCATTAAATGCCCTTGTAG
TGATGCTCGGCGGGTCCTGGCAAACACTATATAAGCCACCCCGAGCTCTGTGACAAGGGT
TCAACACCATGGGTAATCAGACACCCCAAAGAAAACACAAGCCTCCGGGCACAAGATGTA
GGGTCTTTACCTCCGCCGAGAGGAGCCCGAACTTGCTAAACCCGAGTGACACTTGCACCA
TATCTAGGCCGTGCCCCTCATTCGTACCCCTAATATTCATTGTCAGGATCGTTCCCACGA
CTGTTAGTTTTGTTAGATTCCTACCATTCATTCTAGGCTATGTTACTATTTGAGTAACAG
TCACATTTTGGATCTTCTCTATGTATGTTGTCTATCATAGCCCTCAAGTTAATGACCACC
TCATTCATCACAACCATCTCATACTAGTTCATTTCACTCTTTACCAATCACTCCACTCAA
CCACATCCAACTCCACTTCACTCAAGTCATCAACTGCGCTAACAAAGAGACATCCAAGCA
AGAGAAAAAACATTGGTTATTACATGATTCACTTCTTGATTCCTTGACAACCAATAATTC
TCTTTTTTGATCCAAGGAAAGAGAGATCCAACACACTATACAACTGTTCAACAAATTCAG
TTAACTAATTATACCTAAAATCAATCAACACAATATATAATAGTTCATCAAATTTCATAA
ATCTAGTTGACTAACTATACAAAATTCAGTCAACACATAGTACAAGAGTTCAGCAATTCA
AAAATCTAGTTAAGTAACCGTCAAAATATTTAGTTATCCCTCTATCTAGTTAATTTTATT
ACTACTACCCAAAAAATCCTGTTAATGACAATGCACTCCTTCCTAAACAAGCTCATTCAA
ATCAAGGAAGATGACCACACGCCCTGGTTAATGATAGGTCATTTTAACCTCGTTCCTTTC
TCATACAAAAAAAACCAAAACTTCCGTCAGAGAGAAGCTGTCGCCTTTAACAGCACGATC
AATGAATTAGCACTACTCGAATTACCTCTTCTGGATAGACACTTTACACGGTCCAACAAA
CGATCCGTGCCGACCCTAGAAAGACTTGACCGGGCGTTTTTTAACCTAGCGTGGAACTCC
TCCTCCCCCAACATCACTTTATCACCCCTAACATACTTCACAACACACCATGTACCACTA
ATCCTACGTGTCCAAACTACTTTGCCAAAACTGAGACACTTTAGATTCAAATCTTCCTCG
ATGCAAACCACGACCTGCCATGAAATAATACAAAATAATTGTCCCCCAACCACCGCTCCA
ACCAACAACAAAACTCTCAGCTTTGTCAAATGTGCTAAAATCAACAAGATACAACCTAAA
AAGTTGGGCCTCCAAACGTTCACCTGCCCACCAGTGCGAGATGGTCACAAAACAAATCAT
CACTCTCATCGACCTAAAGGAAGAAGCCAGACCCCTCTCAAAAGCTGAAAATTGCTACGA
ATTGTTGTCTCTCACACTCTACAATCGGCCATTAACGAAAAATGGCCTTATGGAAAGAGC
GAGGAAAATTTCGCGCTGCAATTGACGATGAGGAAAACACTCACTACTTACATACTGGAG
CCTCCCGTCGGCTACACAAGAAAATTTTTTAGATCCCTCATAGTTGATGTGACCGAATTA
CACTTCCACACTCAAAAAGCGACCATCCTTAAAGATCATTTTACTGCCATTATCGGCAGA
GCACCGACTAACCTCTGGACCTTTCAGCCACAACAATACTAACCCCAACCTTTATCCCAA
CTTTCTACTTTGGACTCCCCATTCTTAGGTGAAGAAATAAAACACGCGTTCCTCCAAATT
AACCCTCTAGCTAGCCGTGGACCTGACAGCTAGCCATGAACCTCGTCAAAAATCATATCA
CCTCCTTCATGAATGATTTTCAGGATCTCGGTGCCCAAACATAATGCCTAAATAGAGCCC
ATCTAATTCTACTACCCAAAAAGACCATGCAAATACCCGTGATGCCTACCGATCGATCTC
CCTCCAAAATTGTCCTATCAAAGCCGTCACAAAGGTACTCGCCAATAAACTAAAACCACT
CATCCCACTACTTGTTCATGGTAACCAGATTAGTTTTATATCGGGATGTTGTATCGCTAA
AAAAATTATCTGCGTAGCAGACCTCGTTGGAGCCTGTCACACTCGAAAAGCCCCAATCAT
GGTCATTAAACTATACTTCAGCAAAGCTTTCGACTCCCGCTCCTGGGACTCCCTCACCTC
TATTCTTCAATGTCGTGGCTTCCTGCCAAAATTCTCAACATGGGTCCATGATCTTCTCTC
GTCTGGTAAAACTATTGTCATGCTAAACGGGATTCTAGGAAATTGAATAAACTGTTAGAA
CAACCTCAGGCAGGGAGATCCCATATCACCATATCTATTCATCATCGTTGCCGACCTCCT
TCAACAAGTGATCCAGCAAGACTATGATCTAGTGCATCTCTGCCCCTATTCGCACATCTG
CCTCCGACCAGCCTACAATACGCTAACCACACCATCATCCTAGGCAAAAGCATCAAATGA
TGCATCCCTATAGCTAAACAACATCCTCCACAACTTCCCTATGGCAAGCGGTCTCTCCAT
AAACTTCACAAAAAACAACGTTTGTACATATGCACGTCCAACCTATCATGGCAGACTCCA
TTGCCACCACTTTGCAATGAACAACCTCATCCTTCTCACAGTTCTACCTAGGCCTACCCT
TAGCACCTATCCGACTCCGTACAAACGCCTTCCTACATATTATCAAACAACGCCACAAAT
GTTTGGTGGGATGGAAAGCCAAAATTCTTTCCAAGGGAGACAAACTAATCCTACTTTCGA
CTGTCCTCGACTCCATCTTGGTCTACTTTATGTCTGTCCTCCTCATCCTAAAAAGTGTTC
TAAAAACCCTAGACTCCATTTGGATAGCCTTCTTCTGGGCCTAGAGGAAACTTGCACTAA
TGCATAATGCTTAGTTGCTTGCAAAAATGTTTGTAAACCAAAAAAGCTGGGTGGTTTGGT
TCTAAAAAATCTTCACCAACAGAATAATTGTTTACTAATGAAATTCCCTGTTAAAGCTCT
CTGATGGAGCAAAGACCTTGGCTAGACTAGATCACCTTACAACACCCAAATTCCTTCATC
GCTCCACAAAACAAACAATCCTTCCTTTGTCACGCTATAAAAAAACATCCAACTTTGCAT
GCCATCTCTTTTATCCTTACAAATTCTGGTACAAACACCTACTTTTGGTTAGATATTTGG
CTACACCACAAATCCCTCGCCTCACTTTTCCCTTGGCTCTACTCACACACCACTACACCT
ATCACTCGTGTGGTTGTTGTTCTGAATCACGATTTAGAATCAATCCTACGGAATCGCCTA
ACGTCTAATGTTTCTTCCGAGTTGTGCTCTTTGTTGTCCCTGATTTTTAGGTGTCGCTAG
GACCAGATGAGCGGTACCTTAACTGTGTCCTATGCTTCACCACCAAGTCCGCCTACGAGC
TATCCATGGGCAATGACGATGATGACACGCACGCCATGTCCAACCCCCTTTGCAAGCACA
TCGTCACAAACCCACTCTGCCCGAGATGTGGGTTTGATGGCGAAACCAGCTCGCACATCT
TCATCGACTGCTCGCTAGCACAACAAATATGGCAACTGATTGGACTCTCTCCCACTGAGA
ACATCGCTGGTCTTTGGGGATGCCGCTTGCCGCCACAGATGGATGCCGCCATTTGGTATT
CCATCCTATTCATTGTTCTCTAAAAACTTTGGGGCTTGAGGAATGCTATGACATTCAGGC
AACAAAATCACTACATCATCTTCATCCTCATGCTCTCGACGCACCGGATGACGAAAACAG
AGCATAAACATGCCACCTCCTCATGTCGTTCCTATATCCTATCACGACTACACGCGCTTA
TGTAATTCACCTTTGTTATCGAGCACACGTTGGATTACAACCATGAGAAATATATTCAGG
TGGGGAACCCCCCCCCCCCTTGATTTTTCAAAAAAAAATCCAGTTAACAAACTATATCGC
TCATAGGAATTTATTTTCCAAACTGTACAAACTATTGAGTTGCTGCATTTCAATATTGTG
TGGATAAATTTGTCCCAAAGGTAACATTTCAACACTAAAGTTGGTACATCTCTCATGTCC
ATGATCAACGGTTTTGTACGGCAAAGTTGATACCTTTAAAGCCTCAAATAAACCTTAAGA
CGAACCTAGATGAAACGGGTCAATGCCATTGTGGATGAAGCCATACACATCTCTGAGCCA
TCACGACATGAATTAACAATCAAAAACATTGACTTCGGCGCATGATCAAATACCACTATA
CCCCTAAAGAAACAAGGGTGAGAGTCGGGAGGGAGGGAGTTAATGACTCACACCATACGA
TGGTGTTGCTTCTCCACGTAGTCAACGATGAGAGTCTCGTCCGTCATCACCTCCAACAAC
GAGGGCGGTCAGGCTCCACCTAGAATGATGATGAGATAGAAGGCATGGAGACAAAACAGT
TTGTACTGAAAGTGAATATGTTTAGCAATAATGAGGCCTATGAGCAAATGTCAAAAGTTT
GATGCCTTTTATGGCTTTTTCGTGTATTTAGCACAATGTCAAGGAGTCTTATAAAATGAA
TTGTAGGACGCCTTCTCATTCCCATCCACTAGCAATGGGCCACAAGGCATGGCACGCTAT
GTAAGTATCGTCAACAACTACAAATGTAATTAGCATCGTAATATGTGACCGTAATCACAA
GTTTATGTACACTAAAATGAGATATATTTTTACCAGTTCCAGTATTAAAATACCCAACGA
GATATATTTTTACCAGTTCCAGTATCAAAATACCCAAAATTAATATAAAGCTAAGATGTT
TATTTTGAAATGAAGAAAGTATCATTCACATAGGGTTTTTGTGGACCTGATAAATATTGA
ACGATGTCAGCCGACGTTTTTCATGGTAATTTTAGTTGACACGGCGTGACAACTTTTATT
GTTAAAACATGACAACTTATTTAGTTGGTTTTTATTAGAAAATTATCATGTATTCATGTT
TGCGAACCTCGCATAAACTGAAGTTGACATAAAAAAGACGTTCTGATTGTCATGCTTAAA
ATCAAACCGTTCGGGATTTATGATTTTCGTTGTTTTAGAAATTCAACGCAAGTTGTACTC
CATAAATTAAGACACCACCATTGGGTCCCATCAAACCCGCATGGGGAAATCCCGCGGCCA
GCTCTCCCGCCCACCGGACACCAACACCTCACTCCGCCTCGCCGCCCAACTCCAGTCATG
CGGCCGCGCCGGCGACCTCCGCCTAGCCCGCCGCCTCCATGCGCGCTTTGCGCTCTCCGG
CGTGGCCGCCGCGTCCGCCTTCCTCACCAACCACCTCATCACCATGTACTCCCACTGCGC
CGACGTCCGCTCCGCGCTCCGCCTCTTCCACGCCATGCCCCGACCCAACCTCGTCTCCTG
GACCACTCTCATCTCCGGCCTGGCCCAGAACTCCATGCACAGCGACGCGCTCAACGCGTT
CGCGTCCATGCGCCGCGCGGGTCTCGTGCCCACGCAGTTCGCGCTCTCCAGCGCCGCGCG
CGCTGCAGCCGCCCTCGCTGCCCCGCGGCCCGGCGCGCAGCTGCACTGCGTCGGCGTCAG
GCTCGGTTTCGACGGAGAGCTATTCGTCGCGAGTAACCTCGCGGACATGTACTGCAAGTC
CGGACACTTGGCTGAAGCGTGCAAGGTGTTTGATCAAATGCCGCAAAAGGATACTGTTGC
GTGGACTGCCATGATCGATGGGTATGCCAAGAACGGGGGCCTTCAGAAGGCCGCTGTAGC
TTTCCGGGATATGAAACGAGAGGGACTGGTTGGAACTGACCAGCATGTGTACTGCAGTGT
TTTGAGTGCGTCGGGAGGGCTCAAGGATGGATGGCTTGGCCAAACCATCCACTCTGCTGT
AATGAAGGCAGGGTTTGAACTGGAGGTTGCTGTGAGGAATGCGCTCACTGACATGTATGC
TAAGGCTGCGGACATGGAGAATGCTGCTCGTGTTGTGAAGATTGACCCTGGAGGTTGGAA
TGTTGTGTCAGCCACCTCGCTGATTGATGGCTACGTCGAGACTGATAGTGTCGAGGAGGC
CCTTCGAATATTTCTTGAACTGCAGAGACGAGGAGTTGAGCCCAATGAATTTACTTTCTC
GAGCATGATCAAGGGATGTGCCACGCACGCTCTGCTTGAACAAGGTGCTCAGTTCCATGC
ACACGTGATCAAGACAAATATTATCAGTGACTCCTTTGTTAGTTCCACCCTTATGGATAT
GTATGGTAAATGTGGCCTCATTTGTTCGTCGGTTCAGTTATTTAATGAGGTTGAACACCA
TACTGATATTGCTTGGAATGCGGTAATCAATGTCTTTGCACAACATGGTCATGGTAGGGA
AGCTATCCAAGCTTTCGACAGGATGACCTCAAGTGGAATCAGGCCAAATCACATTACATT
TGTCAGCCTGCTTACAGCATGCAGTCATGCTGGGTTAGTGGATGAAGGACTGAAATATTT
TAACTCCATGAAGAATGCCCATGGTATTGAGGCTAAAGAGGAGCATTACTCCTGTATCAT
TGATATGTATGGTCGAGCTGGGAGACTAGCTGAAGCAGAGAAATTTATACATGAGATGCC
TATCAAACCCAGTGTCTATGGTTGGTGCTCCTTGCTTGGAGCTTGCCGGATGCGAGGAAA
CAAGGAGCTGGGCGAGTTTGCGGCACAAAAGATAGTGGAGCTTGAGCCAGATAACACGGG
TGTTCACGTATCACTTTCTGGGATCTATGCATCATTAGGCCAATGGGAGGATGTGAAGGC
AATCAGGAAGCTGATGAGGGATAGCAGGATTAAGAAGCTTCCCGGTTTTAGCTGGGTTGA
TGCTAATAACAAAACTCATGTTTTTTCCTCCGAAGATTGGTCACATCCACAGCAGGAGAA
GATATATAAAAAACTTGAGGAAGTCTATGAGAGGATAAAGGAGGAAGGTTACGTCCCAGA
CACACGGTCCTTACCATGTAATTTAGAAGATACTGCAAAGGAGAGGATTCTGCGTTATCA
CAGTGAGCGGATTGCCGTAGCTTTTGCTCTGATAAGCATGCCTGCTACAAAACCAATCAT
TGTGAAGAAGAATTTGCGTATCTGTGTAGACTGTCATTCTGCACTGAAGTTCATTTCCAA
GGTAGAAAGCAGGGATATTATCGTTAGAGATAACTCCAGGTTCCACCATTTTGGGAAAGG
GAGGTGTTCCTGTGAAGATTACTGGTGATGAACTCATATCTCTTCTTTTGCATTAGCAAG
GGCATCCTTGAATCGTTGCCATCTGTCCATTTCACAGTGCTTCAGTTTTATGTCACTATA
TTTGAATGCATGCTGTCAAAACAATATTGATTCTGCAGTGAAATATGGAATTAAACTCCT
ATTTAGAAAAGGACTGGGAAAAAAATGCAAGACCATAGCTCATTGGTGCAGGCCATTAAC
CTCGCCAATGCAGAATGCCATGCCATGAATGCAAATATATACTCCCTCCATTCTTAAACA
TAAGACCTTTTAGAGATTGCACTANNNNNNNNATACGGATGTACATAGACATATTTTGTA
GTATAGATTCACTCATTTTGCTTCGTATATAGTCTTGTAGTGAAATCTCTAAAAGGTCTT
ATATTTAGGTACGGAG