Contig Data
morexGenes
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Map Locations of contig_138983 (4215 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_138983

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7309 1 136 bp None Available Available None
MLOC_7310 1 1110 bp MLOC_7310.1 Available Available LOC_Os10g39410.1, FRAME:-3, EVALUE:3e-27, 13110.m03607 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed





CDS Structure of MLOC_7309






CDS Structure of MLOC_7310






Contig Sequence (4215 bp)

>contig_138983 4215 assembly3_WGSMorex_rbca.fasta
TCTCAAGTGCCTCAAGTAGGGAGTTAATAATTTAGATAATAAAAGTGGACTTATCTCTAC
ACACGTGTACACAAACTATATTTTTTATCGATTTTTTTATTCATCTCCATGGATTTGTTT
ATTGTATTTTGCCATATGTTGTGGCTATATATTTATAATATAAGTCTGACTAGCTGTTTA
GACATCATCATACTCGTTTGATCAATTCACTAAGCCTAAAATCTAAGCATTCAGGCAATT
AGAAAGAAACTTGGATACATGGCTACATGGGTGAGCTGAACACCAAACCCGGACACCGTG
GGTCTCAAATGCTTGCATCTTGAGATGATCAACTCCAGTTCATATCTTCCAGCATCCAAC
TGCATTCAGCTCATACCCATTTTAAGCCAAACAAATCACTTGCTTATCGCGATTTAAACA
GTTCGAAGACGCATACAGCGATAGAAAATGGGGAACACACCGACCACATTTCACAGCAGA
GCAAGCGATTTAAGACGAATTCAGGGATAAAACGATGGAGATTCCCATTCCATGCTCTAC
TAGTACCACATCCTAACAACAGAGAGAAAAGCCATGCTACTAGCTAGTACTACTACTGCA
TTCCATGATCTACGCCGAAGCTAACTGCTACTGCTAATATGGAGGAGGCGCGAGGCGGGT
TCGGCCGGACCGGATCGGCGCGGCCTAGTAGTAGACGACGTCCTTGCCGGTGACGGTCTT
GCGGCGGGAGTGCTCGCTGCAGGTGAGGGCGTCGCGGACGGTGGCCTCCAGGAACACCTT
GAGCACATGGCGGGCCTCCTCGTAGATTTGCCCCGAGATGCGCTTCACGCCTCCACGGCG
GGCGAGACGGCGGATGGCCGGCTTGGTGATGCCGTTCAGGTGGTCCCGCACCACCTTCCG
GTGCCGCTTGGCGCCTCCCTTGCCCCGGCCCTTCCCGCCCTTGGCGCCGCGCTTGCCCAG
AACCTTCTCGCCCTCGCCCACCACCTTCTCGCCCTCGCCCAGCAGCAACTTCTCGCCCTT
GCCGTCGCCGTCGCCTGACATCCTCGAAGCTTGGTTTCTCTCTCTCTCCGGCGAGGTGAG
CTTGGCTTCTCTGTGTTTGTGGTGGCTTGCGGCGGTGGAAGGTGGTCCCGTGTGGAGGAT
TTATAGCGACGAGCATGTGGTGGAGGATGGGAGTAGAAGGATGCGGCGTGTGTATCGTCG
GATGGGAGATGGATGGCTGAGAGTGGGAGGAAGGGATGGCGCGGATCGGTGACGTGGCGC
GGGGTGTGTTTCCTCCGAGGGGAGTGTGTTTCCCCCGGAGGGACTGGAGCACTCTCTTGT
CCTGCTTAATGCGACTTTGTTACCGTTGGCTGAACTGCGGATCGGTAATAATCGTGACTC
GTGACTCGTGGTTACCGTGGGCAGCACACCTCTCCTTCGAAATTGTTACCGTTGGCTTAC
CCTCGGAGCACTCTCTCGTCCGTTGAGGTTGACACGTAACAGCATCTTTAACATACGCGT
AACCGCGTAAAAATAATATTTATAACATTGAAATAACGAATTTGTACGCGCAGCAGCAAC
ATTTAAAACTCGAACAAACCAAGAATATCGAGCTCACAAAAAATTCAACGGTATATAGTT
CGATTTTATTTACAACTCAAAGCAATAGTTTATCTTTCAACACAATAAATAATTCAACAT
ACAACATCAGACGGCTAGATCACGCGGTTGGTGGAAGTCGCGCGCGAGTCGTTGTCTACC
GCGTGGGCAATGCCATTTTGCTCCGCACGCAGAACCAACTAGCCCGCGCGCATTTTTTAC
GCGTACGTTAGAGCGTCCGAAACGGCTGCGCGCGTAAAAAAATACATTTTTTCCACCGAG
GCGTTAAAATCATGCATTTGTTAAAGATGTTCTAAGGGCATCTCCAACATAGCTCGCAAT
TTTTTACTGCATCCGTGGGTGAATAGAGAACAATCCATATACACGGGATATGAAAAGATG
ACATCTAACACTAGTTGCATTTAAAAAAAAAGGCATATAGCATGACTTGAAAATAATGAA
GCCATCAACAGACTAAAATATAAGGTGCAGGTCATTACAACGGCTGAGGATGAAAACAAC
ACAAAAAGAAAATTACAAATAAAGATCGCGTAAGGCTGAAGCTATAGAAGCCGGCCAAAG
AGCAAAATTACCAACACAAGAGAAAAACAACCATGCCGTCGGAGAGCACCATGCAGATCA
AAACAACGGGGACACAGTGGTCCGCGGATCACAAACGAACAGTCAAGAGGAGGATGTAGG
ACGAAACCATTGGCTCTGCCACACCCCAGTCATGCCATTGCCGGTGGGGAGACCACTATC
TCCCTTACATCCAGCACAACGATGTCGCTCAATGGCCGACAAGCACGAACTCAGCAAGGC
AGCTGCCATAGAAGGGTAACAAGACTCAAAACTCCCCGCCTCCGCCGTCGTCGGGCTTCC
GATGACGCACTGCACCGCAGCCGCCACCAACCCACTCATTGTAGCACCCAACCCCAACCC
TACCCCAAGTCGACGCCTCCAAGAAGGACCATGACGTCGGTGTGCATCCGTCGGCCCGCC
AAAGGCCTAGGTTTTCACTCGGGGACTAAAAAGGGGGAAGGAGGGGAGGAAGAGGAAGTC
AACACGCCCTCAACAGGGGAAGCGCGAAGCTGAAGAATCGTCGCCGTCGTCGAGGTCAAT
GCGGAGTCGACCACGGGAATCCCCTGCTCCAAGCTTCCGCTGCCACACCCTATTGAGCTA
GACCTGGCAGCCCAAAAAGGCTGGATCCAGATCGGCGAGGGGGAAAGCCACATCGGGGAA
GGAGGCAGGGAAATCCGAGCAGCGAGACGCCTTCACCACTCAACTGCAGCCCACGTGGCC
AGAGGCGCGACCAGCTCCTGCAGCGCCACCCATCGGCGAGGTTGACGCCGCCAGCTAGAT
CCAGGGCCGCCGCCCTGGCGCCCAAGGCTCCCTGCAGCGAAGCAAGGTAGCAGAGTTTCG
CCACCACGTGCACTAGAGGCAGCGCGGCGACCGACGGCGTCCTCAGGTGGTGGCGGGAAG
GGAGGAGGGCAGGGAGTGGGGGGCTCACGCAAGGGTTTCGTCGCCCCTGAGTCGCCCACT
CGAGGCGGCGCGAGGGCCGCGAGTTATGGACAATAACTCAAATCAATCGGACGAAATTTA
TGCAAACACACACATATTGCATATAAACATGACGGATTTCATACAAACACGGTAGATTTC
ATTACATTCTGAACATATTTTTACTAAAAAAGTAAGACTATGTGCACGTAAGGTCACACA
TAGCTCCCCTCCCACTACCCGCATATGTTACACTAGTCTAAAACCGGTTGCAGTGAACTT
CTTTATCATTATCATGTCCGGCAGCCGGTTCACTGGACCATTGGGAGTCCAGGGGCATAT
GCTCCAGCGTAAAGGACGTCTCACTTCCTCCCCGCTCGTGGGAATGAAACCCCGGACTGA
TACTTCAGCGGGAGGGGAAACGGCACCTCTGCTTTCGTGTAGACCATGCGGGGTCGGTGA
GGGTCCTTGCAAGAGAAGAACCGGGCAAGACATTGGTTATGTACGTCTGCGTTGCCGTGG
TGGTGGCCTTCATGGGACCCAAGCAGTGTCGACCTCCCGTGTTCTACTTCTCCCCCATGA
TGGCGATGGGCGTGGAGGCGTGATAGATCTGCAACGTATCGATAATTTATGAAGTATCCA
TGCCATATTTGCCTATGTTTACAATGTTTTTATATGGTTTTGTTACATTTTATATGATTT
ATTTAGAACTAACCCGGACTAACGTTATTTTCAGCAGAACTACCGTGGTGTTGTTTTTTG
TACAGAAATAAAAGTTATCATAATTGTACGAAACTCTTTGACGATTTGCATGGAAGAAAA
GAGAAATACTGGAGCANNNNNCCACCAGAGGGGGGCCCTGGTGCCCACTAGGCACCAGGG
CCCGCTAGCCCCCCCTTTGGCTCATCGTGGTACCTAGTGGGCCACTCATGTGCCATCTTA
GCGTGATTCCGATGCCCAACAATTCTATAAATATAGAAACCTCCGGAAATAACCATATAT
GAGAAATTCCGCCGATGCAAGACTTTGTAGCCACAAAAACCAATCGGGAGCCCATTCCGA
CACCCTTCCTCAGGGGGAGGTCATCTCTGGTGGCCATCTTCATCATCCTGATGGAGGCCG
TGACGAGGAGGGAGT