Contig Data
morexGenes
Links



Map Locations of contig_138917 (5535 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138917

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7275 1 1702 bp AK376864 Available Available None





CDS Structure of MLOC_7275






Contig Sequence (5535 bp)

>contig_138917 5535 assembly3_WGSMorex_rbca.fasta
TTAGGAACGGAGGGAGTAGAACACAATATAAGTAATGGCATAGAACATAAAACAAGAAGA
TATTCTGGCGTGATTGTTCTTCCATAGAGTTTAGCAACATCATCCCAATTCCACATACCA
AATAACAGCAGTAAATTATTAGCTAAAATGTATTTCTGGTAATCACCATGTTAAAAGCAT
GCCAGAAAAATGAAAATAAGATAAGCATGGCACATATAGCAGAAACGGTTGGAGTCGTAG
ATTCTATGTGATCAATCATCATACAGGTTAGTGTACTGAATGGTGCCGTCAACTATCTGA
AATTAACCACTAAAGCTACATAGTCCATTTGGAATGGATCAATATGGGAATTTGAGCATT
GTAAAGTGGCATATATTGATATAGCAGCACTAATACATAGATGTTGATGACGAAAAAACC
AAACTGTGGAAACATGATATAGTTTCCCCTTTTACAGCTATATATAGAGTGGGTAACCAA
GCACAGTCCGTATATGATCATGATACTATACCACGTTTATTTTTTTCTGAAATATGATAC
TATACCACGTTAGTGGAAGCTGAATTGATCTTTCTCAATAGAATTTCTCTTGTGAACATA
ACTTCTTCAAATAGAAGATAAATGGTATAATTACCAGTCTATAGGTTCCTGGCTTGAACG
TCTTGCTGATGTCTATGAAATCAAACAGAACCTGCAGTAAAATTGCAGAAAGTTGGAAGC
AGGTATAAATTTATAATGAATGGTTCCAAAATGGAACTGGCAACTGAAAGCAGCCTTACC
TGGAGCTGGTCAGATTTCAAAAAGCGCCTTCCCTGGCGACTGCCATCAGGCATGCGAACT
ACAACTGTGACGGCTCCTTCAGCATTTGGCAGTGGCTCCTTTGGTAATGATGCTCGTTTG
GCTGCAAGCATGGACTCCAACTCCTATTTTCATAATGTGGAACAAATGCATAATAAATGT
GTCACTGTACCAAATACAACATGTTCATCAAGAATAATAGACTAATCAAACTTTAACAGT
CTGAAGAAGAAGTATTACATGCTTCTTATCACTTATTCAATGATGAAGATAGTCACAGCA
GGAAACAACAATGACCCTACACGACTTTGATGCTAATGCTTCTGAGAGACATCTCTTTTG
TATTAGGCTGCTTCTAGTTAAGCATGACTAAGTTCAAAAGTATGCCCTGACAAGAAATAA
GTAAAGGAACATACTACACGACAATGATAAAAAAGTATTACATGCTTCTTATCACTTATT
CAATGATGAAGATAGTCACAGCAGGAAATAACAATGACCCTACACGACTTGATGCTAATG
CTTCTGAGAGACATCTCTTTTGTATTAGGCTGCTTCTAGTTAAGCATGACTAAGTTCAAA
AGTAAGCCCTGACAAGAAATAAGTAAAGGAACATACTACAAAGTTCGACAATCTCAAGCA
TATCTTACAGACTGGCACTCATTCCACTCTTGTTCAAAATTAGTACTCATATTAATTGAC
AGTTTGCCACATCCGCAGTGATTTAACAAGTCGTTCTGATGAGCAACCCCTAACCAGTAC
AGCCTCCAAGCGTAATCCGTACACGAAGACATCCCAGCGTATTACGAGGCATCTTATACA
GTTAGTATCGGGATGTGTGTGTTAAGCTAGGCCCATGACACTACTGTAGTGTATATAGAG
GTATATATGTAGCAAACATGAGAATACTAATAGAGGAGTGAATTCCAGAACTTATCCCAA
AGAACTACATAGATAATGCCAACTGAAGTACCTCTTCCTCAAGTTGCTTCCTCAGCTTTT
CCTCGTTCTTTTGCTTTTCCATTTCAATTGCAGCTTCTCTTGCAGCAGCTTCTTCTAATC
TACGGAGCTCAGCATCCTCCACAGCCTTCAACTCTTTTTCTCTATCAGCTTGGAGAGCTG
CAAGATACTCATCATCCTGTAATTTAAAATATCATGTGTTAGGTGCAACAGTCAATCCAT
TCCCTAGCAGATAAATACAGCTCCATACCTGCTGCTCCCTTAACAACCTCTGTGCAGTTA
ATGTTGGTGATGGAGGATGCACTACTCGGGGATAGCCAGTTGAGATCCCATGAGATGGGA
GGGGAAATGGATATTCTGTGTGTTCAGGAATCCCACCAAACATAGCAGCCTCAAGCATAA
CAGCTTCATCATGCTCTTCAGAAGAAATGCCTCCCCACTTGACAGAAGAAAAAAACAGAA
CAGTGAGTTGTGGAGAAACTATAGTGCACCAAACAGAAGCCTCCTAGAGGCATGAGGTGA
TTAAAGTACCTCTGAGGGGAAAGCTCCATTGTGCTGGTGAGCATTTTGAGTAGCATGAGG
CTGAGGGCCGGGAGGACTATCAGCCCTTTGCACTGCTTCTGTTGGCCCGGCAGTTCCAGA
TAGAACACGCCTAGAACGTTGTCTAACTAAAGGTTCTTCGTCAACGTCTTCAATATCATC
TTGGAAGTTCTCTTCATCTACCAATTGCCTAGAAGTTCCAGCTTGTCCTGTGGTTAGTAC
TTGCCTACAACAAGAAAGGACAATACGAGGAATCAGTTATCACTAGATAGAGAAAGGTTA
GTTCGAGGCTATTACGATAGAACACACAATGTGCATGCTCAGCTAGTCAAACTTGTGTTA
AAATAGCACAAAGACAATGCTTTCGAAACTGGAGACAGATGGAACAATGAAAACTGAGCA
AGTGATGAAACATTCCTGAGAAACAGAGCAAATTATTGATCTACAATTAACTGAATAAGT
TAGACAATGGACAATATTTGGTAGTCACCTTTCAACTGCCTCATTTGCTCTTTCAATGTC
TTCCTTATCAGATAAATCAGAAGAATTATCAACTGCATGCATCCCCTCTTGAAGTAGAAC
TCTATCTCGCTCTGCTACCTGATTGATAAAAAAATAGTTAACATACATCACAAAACAAGA
GCTCCAAATCTTGGAGAACTACCTACAAGGAAAGAGAAATTGCTCGTGCAAGATCATTAT
CTCTTAACGGTGATACATTCTCACGTGCACCAGTATTTAAAGCCTAAACACGGCAGATTT
TGTCAAAATAAAGTTTAAAACCTACATTATTCAAAGAGCAAGGTATCCAATAAGTCAAAG
CTTACATTTGTAAGTTCTTCCGCATCCCTTTTTGATGCTTCAATTGCTGCACGGATCATC
TCCTCTTCTATGTCATTGTTATAGTCACTAACATCCACCAATGGAGGAGCACTTGGTGCA
GAATTGTATGTTCTTGGAGTATTTCTTGGGATAACAGGAGCATGGGTAGATGGCAAGTCA
TCATCATTCTCATCAATGACAACAGTCCCATGAACCTCCAGACCATATAAAGACTCGCGT
CCAGTAACATCTTCAATAACAGGACCCTGACCAGAACTTCCAATTTGAGGATTATTGGTG
TCTTTAACTTCAATAGGTATCTGCCGCACATCCCTGGGATGTGTAACCTGAGGTCCCTGA
CCAAAGAAACCAGCAGCTGCCCTTTCAACAAAACTTGGGTCCAAAATACCAAAAGGGTTG
CCCGTAGATCGGCTAAATGCAGGATCAAATGGTTCGTCCAGATCCATAACGTCATCATGA
CTGTCAGGTATCGGATTCTGATTGATTCTGGTGCTGAAAATCATACAGCTTGGTTACATT
TTGTGAAGGGAATTCCGTGGACACTAAACGCGTATCCGGAAGAGAACAGGTGAGAGAGCA
AAATACTTACGTTGATCTATCTCCTTCATTGAAGTATGCATTCACCGCTTCATTTAGGTC
ACCGCTATGCTCCTATGTACATTTCATTGGCCAGTTATTATCATATATATGAGCCCAGAA
AGCTAGTGCTACACATATTGCAAGAATCACTATGTCTAAGTCTAACAGATAAGCAAGGTG
TGAAACATGACGGAGTCCAGATTGATCCAGGATAATAAAGCCAAAATAACATGAAAATAT
TATCACCTCAACCCTACTGTTTATCAGGCTAAAATTTGTATGAGTAGCCTAGCTATAAGG
TGCAGCACAGCACATCAAGTGATACTGAGTAAGGTTTAAACTGATATTCAATTTACTGAT
ATTTTACTTGTTTAAATTCCAAATTACCACTGTATGTTTTTACAGCAGTATTAGATGAAC
AAATATATATAAGAAAGTAAAATGCACAATAATTCAGACACTAATAGTGTATGTGTTCAT
CAAATACTCAGTCGACATAAATCTCCCAAAAAAGCAGATCTGCAAAACTTCATCCATTCA
GTTAACACAGACTCTCGGCACATCCAGAGACGACAAACATGTTTATAAAAAGATGTTTTG
CCTCTTGCCCCTACTCCAAAAGTCCAAATACAACTAACTACTACCGTGCTCCTCCCTACA
GTCCATGGCGCAAACATCTGAACAGATTCAATAAAATTCAGTCCTCCCACTGCACAAATC
AACACAATTTCCAGCCATATCGTTTATGAGATCGAATACCCCCCCCCTCCCCCACTCTAA
TCCATTGATGATTCAGTGTTACTTAAAGCACAAACATAAAACAGAAGCTAAGTGTATGCA
GCAATCGGAGATCGCCGGCATTACAACCCCAATTGGAGAATTATCATCAACCCTAAGCAC
CCAACAGCACGACTCTGCATACTGATCATACAACGATGCTGAGTCGCATACATACAAACC
ACCCAGCCGCCATCCCACCGCATCGCCATCTGACCCAACCGAGCAGGTAGAGAGCGAACC
CTAACTCAACCCGCAAGCCACCAAATCCACACGAACGTAGCCCCTGGCGCGGATTTTCCA
TGGGGAAAGGGAAGGGACAGAAGGCGGTACAGACGAAGTTGTGAGGGGGAGCAGGCCGGT
TCACCTCGAGCTTGCGGGCAGCGACGGCCTCGTCGGCGCCGGTGATGCTGATGAAAGTTT
CGATCGCCTCCTGCGACGGCTGTGCCATGGCGGTAGCGCGGGGACGCCGTCCTAGGGCTC
CGCGGCGACGCGACGGAGAGGGGGTTGGGGTGGAGTCCGGGGGGAGGAGGAGCGATAGAG
GTGGAGGAAAAAGAAAGAGGAGAGTTCGTGAATCCACGGAGCCGTGCTTATTAATTCGAG
TAGTGCCGATGCGGGTTCCTTCTCTTTGGGGGATTTGCCACTCACATTCTCGGTAGTTGA
GATTTAAGTGGGCCGTTGGGCCGTAATTATGCTGAGCCCATTAGGGCTGACAAACATTTC
CACTTTTGAACCATGATTTGTCTCAAAATAAAACTTTTGAACCATGATGCCTCTATGCCT
CTATGCACAAGAAGAGTTTCAGATTTTTGGGCATGGGGAGAAAAAGAAAGAGGAAGGTTT
TCGGTAAGATCAGTTTACAAATTACTGTTGGGCATCTTTACCTAATAATAATAATATAGC
AAAAGGGCTCGTGCGTTGCAACGGAAGAAAAAAATACCACACACTTTTAATCTTTTTATA
ATCATTTTGATTTATTAAAATAATAAGCTAACTAACTAATGTAGTGAGTCCTATCCTATT
TTGTTGAGAAATCAA