Contig Data
morexGenes
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Map Locations of contig_138873 (4742 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_138873

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7256 1 568 bp None Available Available None
MLOC_7257 1 791 bp MLOC_7257.1 Available Available None





CDS Structure of MLOC_7256






CDS Structure of MLOC_7257






Contig Sequence (4742 bp)

>contig_138873 4742 assembly3_WGSMorex_rbca.fasta
CGACGTTCTTCGCCATGTCCGGTCTGCATCTGCATCTGAGGTCCTTGCTCATGGGTCGGG
GCGAAATCCCCGCGCAGCGACGGCCTGCGCTGTCAACGGCGATGCCCGAGGGTGCTGTCA
CCTCCTTGGAGGTGTTGGCATGGCCCTTGACCGGACCTCCTCCTCGAGCACCGGGAGAAA
TCCTAGGTCCGGCCTCCTGGACCGGGCAGCGGCGGCGTCTCAACGCCGATACCCTCTTGA
GCTGCTTTGGCTGCAAGCGGAGTACTTGATGCGGCAGATGGTGGCTGGTGATGCACCGTT
GGCGTAGACGGCTGAACAGGGAGCAGGTTGTTTGCCAGCGCCGGCTCTCCCCCAACAATT
GCTATACCAGTTCCCTAATCAGGGCCCTGCCTTTCACCCGCCGATCCCTAGGCACATGGG
TGTGAGGTACGTTGGCCTGGGCAGTCCTGGAGCTGCAATTGTCCCTGGAGGTGTCTAGCA
ATGGCGGCTGGGCGAGGCCTAATGTCGTTGTGTGTCTGTAGCTGAGGGCACCTCCTTACC
TAGTTGTAGTCGCTTGGTGAGGACGGTCGTGTGTGTGTGTGTCTCCCTCCTTTCTGGAGG
TTGTACCCCCCAATGTCTTCTTCATGTTTTCTTGAAAAAAAAAACTATGCATTTTTTTAT
TAGACAAATTGTCATGCACTTGAGTTTTAGCTATCTGGTAAAACTGCAGGTTTCAGAACT
ATATATTTTATTATATACTTTCTTCGTTTTAAAATAAGTGTCTCAACTTCATATTAACTC
TAGTATAAAATTATACTAAGCTTGAAACAGTTATTTTGAGACGGAGGGAGTTATGATTTA
AGGTTGTCTCTCATCTCATATAAAGAGCGTCAGATTTTGTGGTTCAAAATTGTCCAATCT
TTTGTTTTGGGTTTTTCCTCTTATTTCTATTTTTCTAGCGTTTTCTTCCTAAATTTGTCT
TCATTCGAGCTGATTGCCATGTGAAATTTGGGCATTCATTCACTTGTAGGTGGGGTCTCT
GAAAATAACGGATGTAGAGTACTACGTAGTTCGTTTCCTGCATGATCATCTGAACCACCA
GCAAGCTTTGGACTACTGCTGGCCCCAGAGAGAACATGGAGATGTTGCGTGACTTGCGTC
GGAGTGGATACATTGCATCTACAGAAAGAGAATGGTAGAGATCTAGGATCACGTGTCTAT
ACTAGTAGGTAGAGTGGACAATCATATCCACGCACATCATCTTCAGCGTAAACATTCAAG
CTTTGCACTGGACTGTAACTTGAACAGTTAATAAATACCCCTCCGTGTTAAATACTTTCT
CCGTGTCAAAAAATTCTTATTCTAGGGATTAAAAAATGCTTTTATATTACTGGACGAAGG
AAATATTTTCTTTGTATCTAAATACTTATAGTTAAAAAAAACTAAACATTTTTTTCAACT
ACAAGTATTTAGGTATAGAAAAAGTAGGTAATAGCATCCGCAGTCCAGAAGCTTGGCATG
CATGAGCACTACTCATTCATAAAGTTGCAAAATGTGCCGTCATCGTTCACAAACTTGCTA
CGTCGTGGCGAAAAAGCCTATAAGACACCGCCGCTTGACGGCCATGTCGCAGCCGTCGGC
CTAGCTGGCTTGGCACTACCCAGTGTTGCATTCTTGCTAGGGACGCTGACCTCCAAACTG
TTCTAATCTTCGGATTGCACGATTCAAATGTGGTTTGTCATTTAATGTGGTCTTGCAACG
ACCCATGTGGCATTTCAGACACATTTTCCTTTGCAAAACGAAGACATATTAAGGGGCTTT
GTGTATGTCTCGACAACAACCACATCCGCTTTTGGCCACCCTGGTTAATCAAAGATGTCC
CTCCTTCGCTCACGCACGTTCCCCTCCGACACCAGCTTACAGCGGCCACTTTGCATTTAA
GCCGGCCGAGAGCGAACACGATCTTTAATTGACACCAACATTGAAGCGGCACGCCGACTG
AAATAGCACCACATGCCGCACATCCGGCTGAACATGCCTTATCGACGCATTCGAATGCCT
CCATTAAACTCGTGCGTGTGCCGAGAAACCTACTTCGGCCACACGTTCGTTCTTGAGCCG
GTCGATATTAAACACAACGCTGGGCAAGCTTCTCGTGTCCGCCCGCCATTTAAACGAGGC
CAAACGTTGGGCAAGAAACGCACCACTCCTCCGCTCTTCATCTTCTCCTTCCACCATTTT
CTTCACCATTTGCATGGCATCCGGCGAGCACGAAGATCAGTTATCCGGTATAAAAGCCGG
TTGGGTGGCCCACCGAGCCCGCCGGATACGAGCCACACAATATGCTACTCCACCTCCCTC
GTCGAGCCCGACGGAGCAAGTGGCCGCTCCAAGGCGGCACCTGGTTGAGCAACTCGCCAC
TCCAAGCCATTTCATGGAGGAGTGGCGAGTTGCTCCAGGCCAGCAATGCAGAACAGGCAT
TATGTTGCCATGGACGAGGTCGGACACGATCCATCTGCCATCAACGTTCGCGGAACAGTG
CCCTACCGACGGAGAAAGAAGCCAGCACGTCTGCGACCGTCGCCAACATCGAGGAAAAGT
ATAACCTGGGAGGAAGCTGTCGCTTGGGTCCCACGAAGGCCACCACCATCGCATCGTCAG
CATACACATCCGGTGTCTCGCCCTCTCTCGTGGGCCACCGTCGTCCCCCGCCCCCAAAAC
CATCCATGATTCGCGCTTCACGGGAGCGGATGCCCCTCCCCCTCCGGCTGAAGCACCCCT
TTGCCACTCCAATGAGCGGTGCAGCCGGACATAGGGAAGATACAGGGAAGGAATATACCT
ATTTGGGCTCCTGCGGTCTGATGAGCAAGCTGCCGAACATGAGGAAGACAAATGGATTCG
TTGCGGCTGACCGTAGACTAGTGTAGTGTATCCCTGTCGTGGAATGGAACTTCGCGTGGC
CGGACATGCACATAGTTTGACATTTTTAAGTTAAATGTGTCCAAAATATAAATGTCTTCC
TCCATTTTTTATGAAATCCGTTGTGTTTGCATGAATTTCATCCCATTTGTTGTGTTTGCA
TGAATTTCATCCCATTTGTTGAAGAAGTGTTTGAAATGTATGCGAACAACGTTGGATGAT
CGTTTCTGTCATCCATGTCCGCACACTGCCTATGACAGTCCGAGACCGACGCTCCAGANN
ATTCCCCTCTTTTCCGTTGTCGTCGTCTTATTATTTTGTTTGCCGCATTCATCNNNNNNN
CATGCGCATCATGTGCATTGCATCGGTACTTCGTTGCTGCCAGTTTTCGAACCTGCATCC
GTTATTAGTTGCGGGTTCTCTCTGTGTCCGTCGTTGACCGTGTTAAGCCCGACCACAAAT
GCACGCGACCGCGACATCGTTAAAATACTTGGTTTTAAAAGTGTGTACAAAATATTCTCG
GATTGAGTCGAAACTTGGCGTGCGGTCTTANNNNNNNNNNNNNNNNNNNNCTGCCAATTT
TCGTCGCAATCCGAGTGTGTCTGGTCGACCGTAGCGGCATCGTATTCGGTTATCGTCGGA
CTTTTTTCGGTGTTTAAAAGAAATACATTGCCGGGTGCCTGTTTTCCCTCTCGTCTCCGG
CTAGCCATCCTACATAGCCCACCTAGCCATTCCCGCGTCTGTGGCCGTCCGATCGCGATC
ACATGGTCGAAAACGGAGCCGGATTCGGATAACCCTAGCCCCATTTGCTATAAATAGACA
ACTCCCCTAATCCCTCCTCGGTTCTCGTGCCACCCCAAACCCTAGCCGCCACCTGAACCA
GCCCTCCTTCCACCTCCAGACGCAGAGCCCGCTCTGGCCCGCAACCTGCCCGCCTGGGCC
CGAAAACCCAGCCGCCGGCCCTCTCAGATCTGGATCAGGAAGGTCTTGATCTCCATGGCA
GCACCTCCCGTGGCTTTGCAGCCCGTGCCTCGCCACCGGCTCGTTGCCCCACCGGAGCAC
CAGCGCGTCGCCGCACGAGCCGAGCCGCAGCGCCCCTTGCTCGCCGGAGCACCGTCGCCA
TAGCTGCCTCGGCCGAGCTCGCTCCGTTGCCTCAACCTCCGTGCCGCTAGACTACCGCCA
TCGTCGGACCTGCAGCATCCCACCGACCAACCTCCGCGCCACCGACGTGTGCTCGGTTCC
GCCGTCGCCTCCGCCCAGCGTCGCAGCCCGCGTGCCGCGCCAGCGCCATCGCTCGACGCC
ATGGCCGCCTCCTGGTCATGCGCGCTCAGGAGGGATGAGCGGTTATGGCGTTGACCCGCA
CATGGGCCGACCCGGTCCGTCCCGCCCCGCGGCGTGGGCCAGCTCCGCCCGAGGTCACCT
GCAGCACCGGCCTGCTGCACCAAGCCCATCGGCCCAGCCTCTTTTCCCAAGCCGGCCCAA
GGCCACACAGGTGAGCCCCTGCCGCCCCTCTATATTGCGCCCATGCATTGATTAGTTATC
CTGCGCCCACCAATTCGGCCCGTGGCATTTTTCAATTATCCCTGCGAATTTAATATTTCA
GGAAATATTAGATATTATAACGTTCGTATCTTTTTATTCGTGCGTCGGATCGAGGCGAAT
TATATATGTAACTTGACTAGATTTTCGTTTTGGGCATATTGTGGTTTTGGGCAGATTATA
GCTATTTCTTGTGTAGCTTGTANTTGTTGAACCGTTGCTCCGTTTTAATCGTGTCCTATA
TGAAACTTGCTTAGAATCTCGTGTAGTTTCATATTGTGTTGCTACCTTCTTGGTTTGGAA
TG