Contig Data
morexGenes
Links



Map Locations of contig_138830 (4705 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138830

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7224 2 1929 bp MLOC_7224.2 Available Available LOC_Os03g07360.1, FRAME:-2, EVALUE:0.0, 13103.m00819 protein expressed protein
MLOC_7223 1 314 bp None Available Available None





CDS Structure of MLOC_7224






CDS Structure of MLOC_7223






Contig Sequence (4705 bp)

>contig_138830 4705 assembly3_WGSMorex_rbca.fasta
GGAACCGGGTGATCCTCAGAAAAGGAATATTCCCTATATNNNNNTCATCAAGCGATTCCA
CCAAATCGAAGGAATCACCTGGTTATTCTTCTCTTATTGATAGAAGAAAAAAAGAAAACA
TCCCTGATAATTGTTAAAACCAAAAATACAGTGAAAATGTTGCTGGATTTTATATAATAT
TTTGATAAAAGAAAAAGAAAAACCTCACAAGGTGAGTTGAGTCATATTCTTCTCATTTCA
TATCACCAACCAAACACAAGAATGGAACGAACCCATGACATTTTTTATCTTCAACCGAAC
ACAAGAATGGAACCAACCCATTCCTTCAGAACGAGACCATGACATGCCATGTCTTTTGGT
TCTCAAACCAAACACACCCATAGTCAAACACTCGAGAGCTCAGCTTGCTTGCATGTAACC
GTGTCTATGGTGGGTATGTTGAAATCCCACTATCATGTATCTTTCCATTTTTATTTTTAT
TTTGGTATTAAGCTTGTCTTCACATATAAATAGTGTTTAAAAGCAAGTATGATGAGTTTG
TTAAATACTTAAGTGTGGACTGAGGACTTGAAAGTAGTTATTCTCCTAGTGAACAGTGTT
ATCCACTTTAGCACTCTACTAGTGCAGCTTTTGCGTTATGCGCCTTTGATGGGAAAGTGC
GCTACAAAAGTTTGGTAAAGTTAACATCCTTAAGGTTTTAGCTGCCAATTATGTGAAGAC
ACCAAAACTCCAAAAGGCAACTGGTGCTATAAAAAAGTGACTACTGCTTGTTGTGTTTGA
CCTTTAACTCTTTTATTTAAAGTATTTCATCACTTCTTTCATAACGTGGCCGAAAGTCCC
AAGGATAGACATGATGGCCACTGTGCCCCCAATACTTGAGGAAATACGGTTATTTTCCTG
TTAAGTATGCAGAAAAATAGACTTTTTTAGCACATCATATTAAACATGTGTTCTCACCAT
CAGAAGACTGCTGAAAGAGAAAAAAGAGAGTCAATAATATTAATAATCAGAGGCATGCTT
TGTTGGAAAAGCTTTATGCTGTTCTTCTTACCGTATTATGTTTTATTTTGTTTGTGTCTT
TGCCTTAGAGGAGAGAGGGGGCTGCACATTTTGTTTGTGTTCTGATAACCATTGACCGGC
AATCAGATAACCATTGAAGTTTGATAGAAGGTCAAAAACGGTAGCCTGTTAAAGGTCAAA
CTGGTTGACGATTGTGTAAGTGGAAGTAGCACTGCCAGATGTCAATGACCGAAAAGCAGA
ATGGCCGGGGACAATAATGCATGTTGTGGAAACGTTTGAAAGGTAGGATGTTACCTAACA
GATAGAAAATTTTGTTTAGTGGTATCTACCAGCCTATACCCGCCGCCCACACTCTGTTTA
TTTGTAGGACTACCGTTGTCTTTGTTGATATGATGGCACAAGTTTCAGGCATTTCTTTTT
TGTCAGCTCCTGATTTTACTTCCTTATCACATGATAAAACGTTGATCTACTGAAGTACGC
CTCTGAGATATTCATATGACCATGAAATGAAAAACGATATTCATATGAGACCATGCATGG
ATTTGGAAGGTTTTCTTTGTGCTCATCACTACCTATTGGTTTTCTTTATGCAGGACAGCT
TGCAGTATGTGTGAAGGAGATAATATATTACTTGTCACATTTAAGGTTAATGGGTCATCC
GGTAGTTGTCTATCACTTTCTATCTTTCTTCCATGGCTTCCTCCACTTTTTGCATCACTT
TCATAACCCAATTATCTCAACTATAAGGAAGAGAAAACAAAGAAAAAGAAAGGGAGAAAG
GAACAAATATATCAGATATTGCTTATCTCTGCAAATTCTAACACCAGAAGAAATAGGCGA
ATGGCAACAAGCTGGAGATATGTACACATAGTATCACATTTCCAAGGATGCAGTGGACTG
AATATTTTTATACAATGGAATCAGACAGCTACCAATTGTTTAGGTGCTATCGCCCAAAGA
TATTCCTGCCAAATATTCCAATCAATATACCATATTTATCTACAGATACGGGAACTTCTG
CTCCCAATCTTCCCCAACCCAAATAGCTATCTACAAGTTACCTAGTACAGCTACAGTTAC
AGGATCTGATTATAGCTATGTTGAACACTCATGTCTCTTATCTAGTATACAATTATCTAA
TGTACAAAATTTCAGCTGTATCATGCTACATGTTTTATAGTAGCAGAAGGCAGCATGAAG
ATGGTGCTCAAGATCTCTCTTGGAAGTTCACTGAGCGCGACAGTGCAGCTGGGTTCCCCT
TCGAGAATGGCAGGCTATTGTCGACTCTGTGAGTTGTCGTCTTCGCCTCATCCTTCGGAT
CAAAAACCCTTGCAAGCTTACACCCTCTGCCATCATCCGTGCCCACCTTGTCGCCCTTGA
TCCCAATAAGTGACCAGATAGAACTCCTGGCCACCTCATCTACGTCATCGATCCGGATCG
TCTTGGGCACCCACACCTTGCCATTACCCTTGGTATCTCTTTCCTCATCACCATCTCTAG
GATGCTTCCGGGATTGGAAGCAACTGGACATTGTTGATACCGGAGAAGCGGCACTAGGTG
GTGAGCTAGATTGACACTGAGACTGCGGCTGCGGCTGCGGCTGCGGCTGCCATGGAGTGT
TCCAGGCTCCCGGAACCATGCAGCCCCAGTAGGCAGCAGCAGCAGCTGGATAGAATGGAA
TTGCTACGTTTGGGGTGAAATAGGCAGGCGATGGTGCACAACTGAATGGCCACATGGCTG
CCCCGTTCATGCACGGGTGCTGCGCAAAATTTGGCGATCTATCTGCTGCAACTCTCTCCC
TCGAGTTCATCTGGCTCGACTCTTCTCCCTTTGCCCATCCTTCAGCACAAGACCCTACTG
ACGGGGCATCGGTGTTCTCGGTCCGGGTTACTGAGCTGAGCTCCTTCATGTGCTTCATCT
GTTCTGAGACGACGTCCAAGGTGGATGCGTCGGAGCCGAAGCTGAGCACCGTGCCGTTAG
TGTTGACCGGGGTGCAGAGAGGATCACCGGGCAGAGCGGCCCTTATCCTCTGAAGGAAGT
GGGACGCGGCCGATATGCTCTTGCTCTTGCGGCGGCCCGCGCCCACGGGCACGTTGCGCA
TGGCCCCGCCGGCCGTCCAGTACCTCTGGCAGTTCTTGCAGAAGTGGCGCGGCTGGTTGA
TGTTGTAGTTGTTGTAGTAGCAGAACTTGGTGTCCATGCTGCTACAGCGTGGGCAGGGCA
GGATCTTGTCAGGCTTCTTGAGCTTCTCCTTCTGGTTGGCCGTGTCACTCTGTTCTTCTT
CTTCTTCTTGTTGATCTGCTGCTGAGTTCTTGACAGCAGATGGATCCTCGACGTCCACAA
CCTCCGGCTGCGGAGGCGAGCCCGTGGAGTCCTGTGGGGCGCTTTCTTGTACTTTCGGTT
CAGCCGTGGTGCTTCCTCTGTGCTGAAGGTCCTGTAAACATTCAGAAAATCTCGATGAGT
TCCTTGTATATATATAGTCTAACTTTGAAATAATTTTGTTGTGAATTAGAGGTCCACAAA
CACGGTGTAATATTCGGGTTATTGACCGGTGACTACAACATGCTTTCCCCCATCTGACTC
CAAGTGTAAAATTTGACAAAGTTTGTTCATATTCCAGTTCTTATATCTGTTAATGAAAAA
AAAGAAGCTATGGTGCTTTAATTTGCAGTGGGTGATGTACTCAGAGTCGGACGCATCTGA
ACTTCTGAAGTCCAGTAGGTTACGGCAACACATATCAGTAGCCACTTTCAGCAAAATCCT
TGGGAGCACGCGAAAACGACCTATTAAAAGAGGCAAGATAATAACCTAGAAAGGCCTGTC
TTTCAGAAGTCCAGATGTTCAGACGACTAGATCATGCAATACTAAAACTGTTGAAACTGC
TATTATTATTAGAGACCAGCAAAGGCGAAATTCCCTTGCTAATGGAAGCTAAACCTGCCT
GCTTAGCGCTTACTAGTACCTCCCAAAACAGGCAGGGAACTCCATGCTTAAGACCTGATG
ACTAGACCAAACACGACTCGTCGCCATGATCGGCTCCAAAGCCAAAGAAAGCAGGCCTCG
AAATGGCCTTTTTTTTTTTCACAGGCTCTATTAGAAACCAATCAAAATTCCCGGGATTTC
ATACACAAGAACACAAAGGAGGAGGGGGAGGGGGCATGGACACCGACCTTGTCGACGTCT
CCGGCGCCGGCGTCCGGCACGGGGATGGTCTTGCCGAAGAGCTTGATCAGGCAGTCTCCG
CCGCCTCCCGCCGCCGCCCTGAACTGCCCCATCACTCCCCGACGCTCTTTCTTTCTTCGA
GGCTGCCTATATGCTCTCCCCCTGCTTCCTTCTCCGGCTATGCTCGTCTGCTCTGTGGTT
AGATTTTTCCCCGGTCGTCGGAGCTACCCCCTACCGTGCTAGGCTCGCTCGCTCGCTCCC
GGACAACAGCGGGCAGCAGTACGCGGCGAGGTGTGGCGCTATCGAGGGGGAGATTTTTTT
GTGCCTGCGGGTCGCTGGAGCTGCTGAGGGTGGATGGGATTGGAGATAGTCGAGTTTTAA
GGAGGGGGAAAGGGGGGGTGGGGGCCACGGGCGCGGGCAGAGAGCCACAAGTTGGGTTTG
TGGCCTCCGGGGTGCGGTTTTTGATTCGCTCCACCATCTCGCTTTTGCCCCCCCCGCGTC
GCCCTCAGCCCCCCCCCCCCCCCCC