| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_138791
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_7202 |
1 |
1789 bp |
MLOC_7202.1 |
Available |
Available |
LOC_Os01g06660.1, FRAME:+1, EVALUE:0.0, 13101.m00662 protein thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed |
CDS Structure of MLOC_7202
Contig Sequence (4456 bp)
>contig_138791 4456 assembly3_WGSMorex_rbca.fasta
GAGCAGCCGTCCGGCGGCGGGGTGCGGCTCGTCGGGTGCTGCAACGAGCTCAATGCCGCC
TACGCCGCGGACGGCTACGCCCGCGCGCGGGCCGGCGGGGTCGGCGCCTGCGTGGTCACC
TTCACTGTCGGAGCGCTCAGCGCCATCAACGCCGTCGCCGGCGCCTTCAGCGAGAACCTC
CCCGTCGTCTGCATCTCCGGGGGGCCCAACAGCAACGACTACGGCAGCAACAGGATCCTG
CACCACACCATCGGCCTCCCCGATTTCTCGCAGGAGCTCCGATGCTTCCAGAACGTCACC
TGCTACCAGGTACGGTACATCGTACATGCCTGTGCTCACTGTACGCGCGCAGCAATGCAG
AATATCCGCGGTGTAGAGAAAGATTTCAGATATATTTCTACCCGAGAGCAACTTTGATGT
GTGTGTGGACTAGTAGAGGACGAGAGGTTTTAGGCGAATTCATAAATGTTCAGTTTTATT
CTCATGTCTTATCTTAATTTCATAAGTTCAAATGCGACTTTGTTATGGATTTTGGCACTG
CCTAGATTTTAGGGGGAAGTTTGGTCGGTGGTCTGAATCTGTGGAGTAACTCGTAGATCC
CTTTGTGACATGTTCCTTCATGTCCGGTAGTCTGGGGTTTTCGGTTTAGTTGGAATTGTC
ACATTGTCGCAGCTCTAGCATTTTCGGTAAGCACATTATTCCAGTGTTAAGTCAATCAGT
CATTATGTGCATATGTGCATCCCTTATTGAGGACATAACCGGGTTATTTGGAGCTGTTAT
TATTTTTTTTAAAGGAGGAAAAAGGAACATATCTGAATGAGCACTGTGATGTATTCGTTT
TTTGATACGTCATGAGTCATGACCCCTTTTTATACATTGCATGCAGGCAGTGGTGAACAA
CTTGGATGATGCACATGAACAGATTGACACTGCAATCTCCACTGCACTCAAGGAGAGCAA
ACCTGTTTACATCAGCATCAGCTGCGACCTCCCGTCGATCCCTCATCCCACCTTTAGCCG
CCATCCTGTCCCTTTCTTTCTCTCCCCAAGGCAAGTCGGCATGCTTCCTTTACGCGCATA
CAAGAATGACGACAATACGATTGGTTTACTAATGTGGATGGATTTTTCATTTGCTAGACT
GTCAAACCAGATGAGCCTGGAAGCAGCGGTGGAAGCCGCTGCGGCATTCTTGAACAAATC
GGCCAAGCCGGTCCTCGTTGCGGGAGCGAAGATGAGGGTGGCCAAAGCACGCAAAGCCTT
CCTAGAGCTTGCCGATGCATGCGGTTATCCGTTCGCGGCGATGCCTTCTGCCAAGGGGCT
TGTGCCAGAGCACCACCCCAGGTTCATCGGCACGTACTGGGGTGCTGTGAGCACTCCATT
CTGTGCTGAGATTGTGGAGTCGGCTGATGCATACTTGTTTGCCGGCCCGTTATTCAACGA
CCACAGCTCGGTTGGGTACTCGCTGCTACTCAACAAGGAGAAGGCCATCTTTGTCCAGCC
GGACCGAGTGGTGATCGGGAATGGGCCTGCATTTGGGTGTGTTCTGATGAAGGACTTCCT
GCGTGCACTTGCTACCCGGCTCAAGAAGAACACGGCCGCGTGCGAGATACATAGTCGGAT
TTTTGTGCCTCAGGGAGAACCCCGTCCCTCTCAGCCTGAAGAGCCTTTGAGAGTGAATGT
GTTCTTCAACCATATTCAGAAAATGTTGTCTGGCAACACAGCTGTTATAGTAGAGACCGG
GGACTCATGGTTTAACTGCCAGAAGCTAAAACTACCACAAGGCTGTGGGTAAGCTAGCTC
CCCTGAAATTAAATGTTTCAGAGCTCTAACTAACTTGGGCCTATGACTTCTTTTATTGGT
TTGAAACTCCCCGCATTGTCTGTTTATCACACCCGTCCTCTTAGTATTTCTGTTTTTTAG
GTATAGTTGATGAATACTCGGTAATATGTTTTCTTCTGGTATTCTGCAAACTCATTAATT
ATTTATCCGGGAAAAAGTGATAAAATGCCCTCATAGTAGTTTGAACTTTGAATGAAATAA
CCCGTGATGCGTCATCGATTGGTGGGGCAATACTATCAGTGTGCTTCATCCAAGGTTCTT
AACATGTTTCAAAATGAACGATAAAAATATAGACTATTTTTTACACTGGTGACAACTCAC
AAGCCATGCTAATTGTGTCAATAGGTATTCCCTTCGTATTTTTTTTCAATTTAACACCAT
TTTCTATTGGCAGGTATGAATGTCAGCTGCAATATGGGTCAATTGGCTGGTCGGTTGGGG
CTACTCTGGGATATGCGCAGGCTGCTAAGGATAAGCGAGTCATTTCCCTCATTGGAGATG
GCAGCTTTCAGGTACAAAAAGGAAATCAGAATCACCAAACGTTCTATCTTACTTTATATT
TCAAACTTATCAAAATATGTACTAGCTAACAAATTTTTTCATTGGACTGGTATATAGGTG
ACGGCACAAGAAGTGTCGACGATGCTCCGGTGGGGACAGAACAACATCATCTTCCTCATA
AACAACGGTGGCTACACCATCGAGGTGAAGATCCATGACGGTCCTTACAACATCATCAAG
AATTGGAACTACACGGGCTTGGTGGAAGCATTCCATAACGGCGAGGGAAAATGCTATACT
GCAAAGGTTGGTGACGCAATTCATTGCAGTGTGTATTTATACGGCATTGCGACGAGATTT
CACACCCTTGTCTGTATATATAGGTTCGAACGGAGGAGGAACTGAAGGAGGCAATTGAGG
CATCCCTGGGACCTAACAAGGACAGCCTGTGCTTTATAGAGGTAATTGTGCACATGGATG
ACACTAGTAAGGAGCTTCTTGTGTGGGGAGCTAGGCTTTTCGCCGCAAATAACCGCCCGC
CGAATCCTCAGTGAACACACCAGGTCTCTACAAGATGCTCATCCAGCTTAATGAGGTCAT
GTGAAAGTTCACATGTACCGAACTCTGAATAAATCCTCCATTTGAGTTTCACTGTTGTCG
CAAGTGCTCATGGTTACTGTACGTAGGTGTTCTCAGTTCAGGAACTGGTACTTGTGTACC
TAAATAAATCTGAAAAAGACGATGATGTGGCCAGCTAAAGAAGCTCTTGGTCTGGGAATC
TTTGTTGAGTTATTCCAGCTTACAGAAGTTTCAGACTTGCTGCGCTTTTCAAAAGCGAAC
GTTAGGCATCATAGGAAGAAGAAGGAAACTGTGCTTCCAGAACCCGAAGAAGATTGAATT
GTGTGGTGAAGTAGCAGAGTAATTCATTCAATGGTGCACCTGGCTAGCCAAAAATTTGGT
GGAGCTTTTGATTGCCCATGAATTGGCCAACATTAGTTAGAAAAATGAATTAGGACGGCT
AAAGAAGCATTGGTATTGCCAACATAAATACTAAATAACTTGTTGACATGTTGGTGCAAT
CAGGGCGTCCCTACAAGGCTTAGGCAACGATGTTGCAACCTGGCACACCGGACACATGAC
TTATAAGACTGACATACCACCCTGCAAGGGCTAGTCATCGGTTGTTGCACGGCTCATTCT
TGTTGCTGCAAGTTGAGATGCAGCAAGGATTGACCGCCATTGCAATGTGGTGTATTGTTG
CTGCAACATCAAGGGTCGACCGTCGTTGTTGTATGTGAGATGTCAAACATTGCAAGGGTC
GACCTCGTTGTAGCACGCGACACACATGATGGTTCAATCGATGATACCCCTCTTGTAAGG
CGATTTGCGGGGCATTGCAAGGGTCGGTCACTCGTTGCTGCATGACGGGTGCTTGATCTT
GCAAGGGTCGACTCCATTGCTGCAAGCGGGAGACACAATGTTGTGGTGGTCGGTGATACT
ATTGCAAGGCGAGCATAGGACGTGTGAATTGCAAGGGTCGGGTGTCGTTGCTCCAAGGGG
TCATTCGTCGCTGCAATAACACGTACCATTGCTACAACATGAGGCACATGACGCTATAAG
GGTCGACCATTGTTGTTGTCAGCAAGATGTTGGACGTTGCAGGGGTCGACCCCGTTGCAG
CACGCGACACACATGTTGGTTCAATGGACGACACCGCTGTTGTAAGGCGATGCACGGGAC
GTTGCAATGGTTGATCACCCGTTTCTGCGCGAGGGATGCTCGATGTTCCAAGGATAAACT
CCATTGCTGCAAGAGAGACACAATGTCGCAATGGCTCGTACCACTGTTGCAAGGCAGACA
AAGGACGTGTTAATTGCAAGGGTCGAGTGTCGTTGCTGCAAGCGGGATGCTTGACGCTTC
AAGGGTCGGTCATCGTTGTTGTGGGAATGACCCTGACAATAGTACCTAGGCGCACGAACG
AAGGGGCGAAGTCTAACTAGGCGCAGCGGATACACTCGGATGTACGAGTTCAGGCCCAAC
TCGAAAATGGTAACAACCCTACGTCTTGAGCCCCGAGGCTGATGTTTTCTTATGGGGTAT
GAAAGATTCCAAGGTG
