Contig Data
morexGenes
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Map Locations of contig_138776 (3966 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_138776

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7196 3 1626 bp MLOC_7196.1 Available Available LOC_Os04g41960.1, FRAME:+3, EVALUE:3e-128, 13104.m04127 protein NADP-dependent oxidoreductase, putative, expressed





CDS Structure of MLOC_7196






Contig Sequence (3966 bp)

>contig_138776 3966 assembly3_WGSMorex_rbca.fasta
CTTTCGTGTGTTGTGTGTGTGTATGACTTGTCGGATGAGTAAGAAAAGAAAAAAAAAGAA
CCGAGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTCGACCATAAGAAAAACA
ACTACACGGAAGCGGAACAACAAAGTAGCGGAACTCCACTCCAGAAGGACATTGTTGGGA
CACAATCCTAGGAACCGTCAAACTGATCGACATCAACGCCTTGCACGACTTCTCCTGCAT
CTGGCATGATAAGCGAGGTGAGTACTTTGAATGTACTCATAATCTCATAGCAAACAAAGC
AAATATGACAAATAATAACAAGGCATTTAACAGGTTAATGTATGAAAATAAACATGATAC
TATCGTGATGTGCATAAGAACTAGATCTCGGTCCCTCGGACCAACTTACCACCTTGGGGT
TATCTCGTAACCACCGTCATCAACTTACCATCGTCATTCTCACACGATCACCTTGTGTCA
TCTCAGGGTTATTAAGTGTGACAGTTGTTTATTACAGTTGACCCACTGTGTGACCTACAA
CGAACTATGGCCATAACCGAGGACACGACTGTCGATAGACTATACACTCCACAGAGGTTA
GTACACTGTATCCACACCATGGAACTCATGGCCTCGTGCTTCCATTCCGATGGACCAGTG
ACATTCCAACAAAACCAATCTATTGCATGGCACTCTCCTGGCCACTCCGACAAGCCCCCC
TTTGGGTTATGTCATGGGTGACCCCGATGTCAACTCGTGGCATCCGTCACCTTTGTGGCC
GCCACCATCGTGGCAAAACAAAACTCGTCCCAAACAAGGACATCAGTATCATACAACTAT
GGGCACACAAGGTTATGCCTGCCCACCGAGCGAGGATAGCGTAAGCACATAACCTTTCCT
AGTTGGAGGCACCGGCGAGAGACATGACAATAGACCGTATTAGGGGCCCCATCCAGGCAA
GTGTGATTGCACTGGTGAGCTCTATTCGGTGGTACCATGGTTTGATCAACAGAGTGTTCA
AGATGAATTATGACCAGGTTTAAGTTGAAAGTAAAATGGTTCAAGTCATAGCAGAAGTGA
AGTGCACGGGTCATGATGATAATGCATCCATATGAATCTCGTGACAATATGAGTCTACAT
AACTAATGCATCAAATCAATCATGGCATAAATCATGAAGTCTAGATGACTAGCATACAAA
TATGTCCTGAAGTAAGTGGGTCATATTTAATATAGTCACACGAGTCATTTTAAATGATTA
TGCTAAAATAAAAGAGTTTAATTCAAATAAACCATTGCCATTGTAATGCCATACTTGCAA
ATGAATGTTGTGGCTTGCCTTAGTTCAGAAGAGTGTCACGGTACTCCTGGTCCTCTCCAA
GGCAAAAAAATTCTTCCAAAATATAGTTTAAATACAAAAAGGAAATATGACTTAAAGCAT
TTTATTGCACCAAAATTCTAGGCAGGAGAGAAAACCTCAAAATATTCATGCAGAAAGTTT
AGCTCAAGACAAAAGTAATGCAAAAAAGATTCAACTCAATTGGATTTATGCTCATTTTCA
AAGAGAAAATGAATATTTTTCTATTAAAGAAAATTATGCCATGGCAAGATTTTGGGAGAG
AGATTAGGTTAGAAACGTTTCCAAGATAGAGTTCACTTGAAAGAAAATCAAAAATAAATT
CAAGTTCTAAGTCCAAAAAAATTGACAGAAAATCCAATTTTCAAATAAAATCTTTAATAA
ATCCAAATAAAAACGAAAAAGAAAAACAAGGGTGTCATTGATTGTAGGTAATCAATTTAG
CAAATATCCAATTTTCAAATAAAATCTGTTGTGAATCCAAATAAAAATGAAAAAGAAAAA
GGAGGGCGTCATTGATTGTAGGTAATCACTATTCGTACTACTACCTTCATCACATTTTAG
AAGGCACGCACGTGTATCTAGGTCATCAATTTAACTTATATAAAATTTTATTGTTTAATA
TAAAAATTATATCATTAGAAAATAAAACATCTAAAGTTTTTAATGATATATTTTTTAAAT
ATATATTTATTTTTAAGTTGGTCAAATTGATGAACTAGATACACGTGCCCCGGACTTATA
AACTGAAATGAAGGAAGTAAAACATTACGTTAGGCTGCAATTTACCACAATCTAGCAAGG
GAAGTCAGGGTACTGTAGCTTACGTGATTTCCCTTCTAGAGGATCTGGATCCGGTTGTGA
GGTTGTAGGTTGTTGTCGTCGATCGCGAGCAAATTCACTGGCACGCGCGCGAGCCAATAA
AATAACTGTTCCCTAGAAGAAGATGAAAAAAAAAATGTGCAGAGTTCTTCCCTACAAGAA
AAAGAAAACGTTGTGCAGAGTGCAGCTTCAATTATTGGCACGTGGTGCCCGTGGGGAAGC
GACGGACCGACAGTAACAGGTGGACGGACCAGCACCGCCCACCGCAGCGCCATGGTCCGT
GGAGCTGGACCACCATGCACCATCGCCCTCGTGATCCCATCCATCCATCCCCGGCACCGG
CGCCAATCATATATCCACTCCAACTCCAAGCAAGATAAAATATCCAAACCAACTCGACTC
GCTCCAGATCCGTAGCCTTGCACAGACTCGCGCGCAGTCCAGTCCACCCACGGCGGCGGC
GATCGATGGCGGAGCTCAAGAGCCGGCGGGTGGTCCTCAAGGACTACGTGGAGGGCTACC
CCACGGAGGCGCACATGGAGCTGCTCCCGGCGGCGCCCGTCGACGAGGCCGAGGACGGCT
CGGTGCTGGTCAAGAACCTCTACCTCTCCTGCGACCCCTACATGCGCCCCAAGATGTCCC
GCCCGCTGCACCAGTCCTACACCGCCGCCTTCGTCCCGGGCGCCCCCATCACCGGCTACG
GCGTGTCCGAGGTCGTCCGGTCCTCGACGCCCGGGGTCGTCGCCGGCGACCTCGTGTGGG
GTATGACCGGCTGGGAGGACTACAGCGTCATCAAGCCCCCCTTCACGGCCATGCTCACCA
AGATCCAGCCCGACGACGGCGTGCCGCTGTCCTACTACACCGGCGTCCTCGGCATGCCGG
GCCTCACGGCGTACGTGGGGTTCCACCACATCGGCTCCGCGAAGCCGGGCGACGCGGTGT
TCGTCTCGGCGGCCTCCGGCGCCGTCGGCCAGCTCGTCGGCCAGTTCGCCAGGCTCATGG
GCTGCCGCGTCGTCGGCAGCGCCGGGTCCAAGGAGAAGGTGGACCTGCTCATCAACAAGT
TCGGCTTCCACGACGCCTTCAACTACAAGGAGGAGGACGGCGACCTCGCCGGCGCGCTCA
AGAAGCGCTTCCCCGACGGCATCGACGTCTACTTCGAGAACGTCGGCGGGAAGATGCTCG
AGGCCGTGCTGCTCAACATGAAGGTGCACGGCCGCATCGCCGTCTGCGGCCTCATCTCGC
AGTACAACCTCACCGCCGGCGAGAAGGAGGCCGACGTCGGCGTGCGCAACATGACCTCCC
TCGTGGCCAAGCGGGTCCGGATGCAGGGGTTCATCGAGCCCGACCACAAGCACCTCTACC
CGGAGTACAGGGCGTGGGTGATGCCGCACATCAAGGAGGGCAGGGTGGTGTACGTCGAGG
ACGTCGCCGACGGGCTCGAGGCCGCGCCTGGAGCGCTCATCGGCCTCTTCCATGGCCGCA
ACGTCGGCAAGCAGGTCGTCAAGCTCACCACCCCCGACACCGAGTGACTCACAAGATTGT
ATTAGTAGCAGATCAATTATCAACCGCCTGTCAATCGTCAAGAATAAACGAAAGGATCTA
TTCGCATCGCAATCGCAATCGCAATCGCAATCGTATTTGGTTGTTGAATGGGGACGAAAA
AGCCAAACATGGTTGTAAAGCCTGTGGGACATCCCGTAACTGTTCGTGCTCACTAGTAGC
CCTGTTACTTGTAGAAATTGAGGCCTGTTTGTTTCATAAGTCCTAGGACTTTTTTAAGTC
CCAACT