morexGenes - Barley RNA-seq Database

Contig contig_138764
Source Contig contig_138764
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_138764 (6632 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_138764

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7183	4	3820 bp	MLOC_7183.1	Available	Available	LOC_Os01g17430.1, FRAME:+2, EVALUE:0.0, 13101.m01949 protein coatomer subunit beta-1, putative, expressed
CDS Structure of MLOC_7183

Contig Sequence (6632 bp)

>contig_138764 6632 assembly3_WGSMorex_rbca.fasta
GAGGAGAGGGAGAGGAGAGGGAGAGAGAGACGAGAGGGAGAGGAGAGGGAGAGGAAGGGA
GGGAGAGGGAGAGGGAGACTAAGGGAGGGAGGGAGAGGGGGGGGGGNNNNNNNGGGGGCT
GACCCGTGACTGTATAAGTCAATGTGTGGCGCCTNNNNNTCGGCGCCACACATTACAATG
TGCGACGCCTGAGGCTTAGGCTTCACACTGCCTGGGAGATGTGCCCTCTCTGCTAGGTGG
TCGGGACGTGTGGCACCGACGGCTTAGACGTCACACAGTGTAGTATGACGCGTAGGTGTC
AGACGTCACACAAAAGGGTAAGGCGAGTGAAATCTTTCGCGTGAGGGTTCACTTCGTGAG
TTCTTTCGTCCGAGGGTCATTTTCGTCAATTTTGCCGTAATTTTCTGCTTAGCCCGCTCG
AGATTTGGACCCGGTCTCATACAACTATTTTTCAGTTGGCATCTCGCCTCTTCGCTCCTG
TCAACCACTCCCCCCCTCTTCCGGCTCCCAGATCTCGATCCACCTCCGCCGCAGATCCAA
CCACCGATACCCCACACGCCGTCGCCCTCCGGCGCGGGTGCACGGCAGATCCGGCGCCAT
GGACAAGCCGTGCACGCTGCTAGTCCACTTCGACAAGGGCTCCGCCGCCATGGCGAATGA
GATCAAGGCGGATCTGGAGGGCAGCGACGTCGCCGCCAAGGTCGAGGCCATGAAGCGCGC
CGTCATGCTCCTCCTCAATGGCGAGACCCTGCCGACGCTCTTCATCACCGTCGTCCGCTA
CGTCCTCCCCTCCGAGGACCACACCATCCAGAAGTTGTTGCTCCTCTACCTCGAGATCAT
TGACAAGCGCGATGCCGCTGGCCGCGTCCTCCCGGAGATGATCCTCATCTGCCAGAATCT
CCGCAACAACCTGCAGCACCCCAATGAGTACATCCGCGGCGTCACGCTGCGGTTCCTCTG
CCGCCTCTCCGAGCCGGAGGTGCTTGAGCCGCTCGTTCCTTCCATTCTCGAGAATCTCGA
GCACCGCCACCACTTCATCCGCCGCCACGCGCTCTCCGCCATCTCGGCGATCTACCGCCT
CCCACACGGCGACCAGCTCATCCCTGACGCTCCCGAGCTCGTTGAGCGCGCGCTTGCTTC
TGAGCAGGACGCCTCCGCGCGGCGGAACGCTTTCCTCATGCTCTGCCTATGTGGGCAGGA
ACGTGCTGTTGCGTACCTATTCTCCAACTCCGAACGTGTTACCGAGTGGCCCGATCTCCT
GCAGATGGCGGCGGTAGACCTCATCCGCAAGGTCTGCCGCTCTCCAAACCGTGCCGACAA
GGGCAGGTATATCAAGATCATAATATCCCTTCTTTCTTCTCCCAGCACAGCTGTTGTTTA
TGAGTGTGCTGGGGCGCTGGTGTCCCTCTCCTCGGCGCCCACTGCTGTGCGTGCTGCCGC
CAACAATTACTGCCAGCTCCTCACATCGCAGAGTGACAACAATGTGAGGCTCATTCTCCT
GGACCGTCTGAATGAGCTGCGCACGGCACACCGGGATGTGATGGTGGATGTTGTGATGGA
TGTGCTGCGAGCACTTTCCAGCCCGAACCTAGATGTCAAGAGGAAAGTGCTGGATTTAGT
GCTTGATCTGCTCACTCCTCGTAATGTGGAGGAGGTGGTGCTTTACCTCAAGAAGGAAGT
GGTCAAGACACAATCAGGGGAACTTGAGAAGGGTGGCGAGTACCGCCAGATGCTGGTGCA
AGCGATCCATGCATGTGCTGTAGAGTACCCAGAGGTAGCCGGGTCGGTGGTGCACCTCCT
CATGGACTTCCTTGGTGACACTAATGTCGCGGCAGCAGTTGATGTTGTGCTATTTGTGCG
TGAAATCATTGAGACTAATCCCAAGCTGCGTGTTTCCATGATCCAGAGACTCAGTGATAC
CTTTTATCAGATCCGGGCATCCCGTGTCTGTTCAATCGCTCTCTGGATCCTCGGGGAGTA
CTCCCTGTCGTTATCGGAAGTCGAGAGTGCCATTACTACCATCAAGCATTGCCTTGGGGA
TCTACCATTGTTCACTCTCTCAGAGGAAGGCGAGACAGCTGATTCCTCCAAGCCAACTCA
GCCCATGGTGAACTCTGTCACTGTGTCTTCCAGGCGGCCTGTTGTTCTTGCAGATGGCAC
TTATGCCACACAGAGTGCTGCTACTGAGGCCATTTCGACTCCACCAGTTACTGCTGGATC
ATCGGCATCGACCCTGAATCTCAGATCACTCATTCTGTCAGGTGATTTCTTCTTGGCTGC
GGTTGTTGCCTGTACGCTTACCAAATTGGTATTGAGGCTAGAGGAGGTGCAGTCATCAAA
GATTGAAGCAAACAAGGCTTGTACTGGGGCCTTGCTGGTCATGACGTCCATTCTGCAGCT
GGGGCTATCCTCGTACCTTCCCCAACCGATTGATAATGATTCATATGACAGGATCGTGCT
TTGTGTGCGGTTGCTTTGCAATACCGGTGATGATGTCAGAAAGATCTGGCTGCAGTCATG
TAGGCAGAGTTTTGCAAAGATGCTTGCTGAGAAGCAATTCAGGGAGACAGAAGAGATGAA
AGCCAAATCACAGATCTCTCATGCCCAGCCAGATGATCTTATTGATTTCTACCACCTGAA
GAGCAGAAGGGTAAGAAAAACTTGCTTCCTAGTTGTTGCTTTTGCACTATGCAAATTGCA
ACATTATCTTTGTCAAATGCATGTTGGCAAGCTAGCCCACAAGTGTTCAATCATTCTGTT
CTGAAATGAACAATAAATTCATTAACTGGTGCTTACTTTACAAATCTATTGCCATATATT
CTCAAGTTACTGCATATTACATGCAATAGGATTTTGAACTGCTTATGGAACTAATTTTCT
TTAAATACCATATGTTTGTTATTCAGTTGTCAATCAACTCACACTGACGGTGTGTGATCC
TTTATATTATCTTGCAACAAACTGTTACATTCTGTGGCTTCTCTCATGACCTTCATTAAT
ATCTGAAGTTCTAAATAATAGCTGTCATGATTTTCCCTGTCCTTCAGTCTTACTACAAAT
TGGGGTTTTCCCAGTTTTGTGGAACCAGTTCTTAGTTTTTTTTTTATATTTCCACTTGAA
TCTCATTGTGTATTTATTTTTTGTAGCAATCTTGATAATGTTTTCTTATTCTCCTTTTTG
TACAAGTATACACCACAATATTGTTAACGGTACTTGCCTAGTCTATATTTGAGTTTTGTG
CCGTTGTGCAGTTGTTTGCAGCCTTGGTTATAACATGAAAGGTCTTGGCATGTTTGTTGG
ATTTGATTTCTGGTAGATGTGTAAAATTAGTTAGATCCTTCAGAAGTTTGTATCCTTGGC
TAGAAAGTTATTTTTTATTTGGGCAGAGGAAATGCTGGTTTTTATTTCAACAGCACTATG
AGCATGTGTAATAGTGATACGTGAACCAAATTGTTGCTTCAAGAATACGTATGATTTAGT
AACCGCAAAAAAAATACTTCCTCCGTCCCAAAATAANNNNNTCAAAAATGACTCAACTTT
GCACTGAAGTTAGTATAAATTGAGTCATTTTTGAGTCACTTANNNNGGGACGGAGGGAGT
ATGATTTAGTAAAATGCTCTTCTATATCTGTTCCCTCTGTTTTTAAATTGTGGATTTTTG
TTTCCTAGGGCATGAGCCAGCTTGAGTTGGAAGATGAGGTCCAAGATGATTTGAAGGCTG
CAACTGGTGGATTCAGTAAGGAAACAGATGATGCAAACAGACTTAACCGCATTCTTCAGT
TGACTGGGTTCAGTGATCCTGTATATGCTGAAGCGTTTGTGACAGTTCATCATTATGATA
TTGTACTTGATGTTACTGTCATAAACCGTACAAAGGAGACCCTTCAGAACCTGTGTTTGG
AATTAGCTACAATGGGAGACCTCAAGCTTGTTGACCGCCCTCAGAACTATACGTTGGCTC
CTGAGTCAAGCAAGCAAATTCGTGCTAATATCAAGGTTTCTTCTACAGAGACTGGAGTCA
TATTTGGGAACATAGTCTACGAGACTTCCAATGTGATGGAAAGATCAGTGGTTGTCCTAA
ATGATATTCACATTGACATCATGGATTATATCTCACCTGCTACATGCGCAGATGTTACTT
TCCGGAACATGTGGGCAGAATTTGAGTGGGAAAACAAGGTAATAAGCTTCTTTCTGTAAT
TCAGTCATTGCAAAACCTCTTAACAAGATATTCTCCTTACCAATTGTAAAATCTCTAGCT
GAAGCTGTTAAATCTTTTAAACGTATGCTCATTCAGATTTCTTACTTATCAGTTTGGTTG
ACTTCATGATGTTTATCTAGTTTTGCTTTGAAAACTATTTGGAGTGTACTGTTGTCTTTG
CATCTGGTTGACATGGAATTCTATATACCTAAATAGTTGATCCACACTAACTCTAGTTTT
CTCACCATGCAACTATGCGAACTCACCATGCCACCATACATGGTAAAAGACCCACATTTA
ACATACACCATGCATGCCACTCATGTTAAATAAGTATTCGACAGCTAACTTGTATGTATT
TTAGATTCAGTTTTCATATTGTTAATCTAAATGTTAATGTTTCATTCAAACAAATCTTAT
TGAAACAATTGCAACCAATTCTCACTGCAATGCATGTGGTATCGTCTCTAGTTTATTCAG
TTGTCTTGTCACTCCTTTTATTGTGTTGATGAATTTGTTGTTGCTCCTTATTTCATTTTG
TAATAACTATTTCCTTTTTGTCCAGGTTGCAGTTAATACAGTAATTCAAGATGAGAAGGA
ATTCTTGAATCATGTTATCAAGTCAACAAACATGAAGTGTCTAACACCACCGTAAGTTAT
GGTACTTCCTTCCTATTCCATTCATTCTCTTGCTTATCTGATTACTGATGGAGTTACCTA
CTTCTGAAATGATAACCTGATATCAGGTCCGCGCTTGATGGCGAATGTGGTTTCCTTGCC
GCAAATCTTTATGCAAAGAGCGTGTTTGGAGAAGATGCTTTGGTGAACATTAGCATTGAG
AAGCAAGTTGATGGCAAGCTCAGCGGTTACATCAGAATAAGGAGCAAGACCCAAGGAATT
GCACTCAGCTTGGGAGACAAGATTACCCTCAAGCAGAAGGGAGGCAGTTAAGCTGTGACG
CAATCTGTTGCAATTGTGTCATGTAGGAGGTCCACTTTGCCAGTTTCATACTACCGGTAC
AGTGGGCTAGTAAAGATGTTTTTATAATGTACAAAAGATTAAAGAGAGGGATGAGAAGAG
GAAGATCGCAAGGAAGTCAGTCTTGAGACTGAAGATGGATCTTCAACTAGTGTCCTCGGG
AGATGCAATGATCTCTCCCAACTCCCTTCCATGATGAGGCCTTTTTTGACAAAAAACGGT
GGTGTAAGAATAGATGTGAAGTTTGTGTTGGCGTTGGATTGAGATACTGTATTTCGGGTC
CCTTTTAATGTCTCATGCTTTTGTCTTTCAGCCTTGCATGTTCTAGCGTTGGCGTGTTAC
CGGTCTCGCTCGTTACTTGTCTTTCAGCTTTACATGTTGTATCCTCCTTTCGCTCTGTGG
TGGCCAGGCCAAACAATTTCTATTCCGGATTGATGTATTTTTATATCCGTGTAGGATTCC
AAATGCCATGACACACTACTTTTGTGTTTTATTAAAGCTGCAAATAAAAGGCCCTCAATG
GTCTGGTCGACGAGGAGATAAATTCACTCGTGGTCACTGGATTCATCTCCAAAGTTCACC
TTGGTCACGACTCCGAAATACCCAGATGACGGTCACAGGTCCGACGTGGTAACTGTTGAG
TTTAATTACCCACGTGTTAGAGCAATCTTAACGGGGCGATCCATTTCGTCCGATTGGGTC
GGTACGGATACAAAAATCGGTTCAATGTGCCGATCCGCGTTCGTTTGGTGTCCGTCTGCC
GACCCATTTCCGGCTTTTTTTGATACGGATTTGCATGGACACGAACACGAGACGGACGTG
CGTGCGCCTTCTCCTCCCCTCGGGCCCGTTGGTCGGTTGCAGCCTCCATCATTTTCTTCC
ATTTCCTCCCAAAACCCTCTCGCCCCACCCTCGTCATGGACGACTACCTTGACGCCGCCG
CTGGCCTCGTCCGGCATGACGACCGCCCTCTCCGGCAAAGGCAAGCGCAAGACCACCATC
GCGCCCAAGCCGAAGAAGACGCTGACGCCCGAACAACGCGCAAGGGAGTCGGCCAAGAGG
AAGGGCTGCAGGCACGCGACAGACACGAGGGATGAAGCCATCGCGCCGGTCGTCGTCGTC
ACCGCCGCGTAGCAGGAGGTCACCAATGCCTGCGTCGTGGTGACATCGAGGGAGGCGGAG
AAGCAAGTCAAGATGATTGAGATTGAGGCGGAGAAACAAGCCAAGATGCTAGAGATCGAG
GCCGCCAACGCCAAGACCAAGGCGAAAGAAGTAGCTCTCGCGAGCATGATGACCGGGATG
GAGATCATGAAGATGGATCACAACACCGTGTCGTCAAGGAAGAGGTCGTGGTTCGAGAAG
ATGCAGGCCAACATGCTCAAGTTCAACGAGGAGTGATCTATGGCCGCGGGCCTTTTTTGT
ATGCCGGTAGGTGTGCTGGCATGACCACGGGG