morexGenes - Barley RNA-seq Database

Contig contig_138706
Source Contig contig_138706
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_138706 (7048 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_138706

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7150	9	3056 bp	MLOC_7150.2	Available	Available	LOC_Os10g25140.1, FRAME:-2, EVALUE:0.0, 13110.m02114 protein aminotransferase, classes I and II, domain containing protein, expressed
MLOC_7149	1	333 bp	None	Available	Available	None
CDS Structure of MLOC_7150

CDS Structure of MLOC_7149

Contig Sequence (7048 bp)

>contig_138706 7048 assembly3_WGSMorex_rbca.fasta
AATGTAAAGATTGCTTCAACTTGTGAATAAATTTAAAAGTAGAAACATTTTCTTGCATTT
GTGCATAAAATAATGTGGTCACCATCATTGGAGATTATGTTTTTTTTTCCTTACGTGGCA
ACGCACGGGTCATTTTGCTAGTCTTATCTAATAGGATATAATGGTACTAGAATCAGTCAA
ATGGTGTGCATCAGAACACCCATATGCAAGGAACCGTGTGCATCAGAACACCCATATGCA
AGGAACCGTGCAGAAATTGTTGCCTTGATGTAGGGGAACATGGTCTTGAGCATGCATTAG
CTTAGCATGTTTCATATGAGCCACAGATGCAGTCGAGCCCGTCCTTTTGGTCGTATGGAA
GGAAAGAATTAAAAATATTTTGTGTGAACCCGGGCATGGCATGGCTAGCAACTCGGGAAG
GATCATGTCAGTCAGTCTGTTTCGCTTCCAATTCAACAAGTGGTGCTTGGCTCAGTTGGC
CGGCTGAAGCTCAGGCTATCCTGAGGTCGATAGTTCGAGCCTCGCTGACTCCCCACCTAG
ACAAAAAACACCATCGTTGTGATGAAAACGCTCAGTGGCAACTTGGGTCGCCTCGTAATA
TCTGAATACATCGGATACATACGAGCAAGTCTGAACCTGGTGTTCTTTTTTTTTTTCCAT
CGGGAATTTGCAGAAGAGAGGTTCAAATTCAGATGAACCGCAAACCGAATCAAAGGCACC
CTTGGACTAAATTCTTGAAAACTGAATCAGAGCGAATTTGCAGTGAGTCTGAATCATTTC
TTATTCAGCAGAGAGTGAAACAAAAAGAGTAGGAGTTGATCAGCCTCCAGCCTTCTCCAA
TCCTTACTTCCTACCTACAAGTAATAAGATCCTTATTGTACATACAGATCAAGCAAGCAA
CCATGGGGATCGATCTACGCATAACAGTAACAGACAGCGTTTCCACGAAGACTTGAAGAG
ACATCACCACGAGATTCATGGATCTACGGGCCGGCTAAGCTTGAAGCCAGCTTCCAGTCT
CCTTTGCCGTGCCAGCAGCAGGCTGGAGGCCGCTCCAGTCGACCCCACCCGCGAACCGCA
GCGCTCTCTCCCGCCAATCTTCTGCCGTGCTCTTCGGTTCTCTGATCAGAACGCGCCACG
GCAGACACACCGGTCATTTATATGTAGCCTAGCGGCACTCTGATGCTAAGAACAGAAATA
AAAACAGGCAGAAACTGATGAACATAGCTTACCTCTCTCGGGTCAATTTCTCCATATCTC
GCCGCGTTAGTCTCGGGCCTTCATCCAAGCCCTCGCACACCAATTCACCATTCTCGTCGG
TGTAACAGAGGATGCCCATGTTTTTGTCTTCATAAACCTGGGAAAGCAAAAAAAATATGG
TGTTTCCTTCAGATCACTAAAAGCAGCAGTGTTACATGCTAACGTAGTTACATCATCACC
ATGACCATTATATTTGAAAAACTGACATGTCATAGCTTTTGGCAAGAACAGGTACCTTGT
GCACCTTGCAGGTGACGCTGACCGAACTAGAAGCTCGCCTCGATTCGGAACTGGAGCAGC
CATCCATGGAAGCTCTTGCGCAGATCTTCCTCCTTGGGACTATGATTGCAGCAGTAGATG
AGTAGCACCTCAAGGCAGCCATGGCTGAGCTATGAGGCGTGGAACCACACAACTAGTGAT
CATGGAGTACATGTCATGTAAATGGCCAGTAGTGGGATAGTGCTAGATGCAGTTTTAAAT
AGGGATGTTAGGTCAACAAAGCTGTGGCAAAGCAGATGATTGGGTGTGCTGTTAAGATTA
AGTTCAGCTGCTTACCCGTTAATAAATTGGCAAGCAAATGCCTTTTCTAACTCTTGTAGC
ATTATTGGTTACAATATTCAGGTCATGACTCATGACAATGACTTCCAAATTGCTTCCCAC
CAAGTTTCCCCACCTCGGTTTTATCCAGGATTCAAAATTGAAAAGTCTTTTTTGTTTTGT
TTTGAAAAGGATAAGTTTAGATTAACTTCAGAATGGTACAAAGGACAAACTCAATTGTTC
CAGACATAAATCATGTAATAACTGACAGTTACAAAGCTCATGTATTTGTCTGTCCGGACT
TTCTAAGTTGTGCTACAGATAACATAAGCCGGCGACTTTTAATCGCGAAATTCTTCCATG
AAAGCTTCATGGAACGCCTTAAAGCGACAGATGATCAGCTGTACCTTCTCCTCCTGTTGC
AGGATTGTGCATCTGAAATGCCATGTGCCAGGTACCTTCATTCAGAGTATAAACACAAAC
GAACATGACATTAGACTAGCTACACGAAAATGTCTCTGCAAAGACATCCACACACCAAAT
AATAATCTTGAATGAAAAAGATAAAATAATTTTTTCTATCTTCGTTCCTCGTCTAGTCAG
TTCCAGAGACAAATACATCCAATTAAGCAAGTGCATCACACTCACTTGTCCGAACACAGA
ACCAGGCAAGACGATGATGCCAGTGTTTTCAAGAAGGCGGAGAGCGTAGAACACATCTGG
TTTGGTGTTCATTGCCTCAGCAGACGCAATTGCCCTTTTAGGCAGCCGAACAGATGGGAA
TACAAACATTGCCCCTTCAGCCTTGCTGCAAGTCAGGCCTTCCAGACTGTTGAATGCCTG
CACCATGGCCTAAACAAAACCAGTCGAAGAATGTGATATTCGGAGATAATGCTATTTTTG
CACATAACAGAGTCAGCAATGAAGATAATCATGGAAGTGAGTGTGACAAAAGCGAACCTC
TGCACACCGGGATAATGATAACATAATGCGATCTCTTTCTTCCCGGTAAGAGGTGTATGA
CTCATCTCCAACCTGACAAAGGGACGATTAATAAAATGTATATAAAAATTCAAAGACACG
ATGAGATGCATATTTACTGACCTTTGGTGGGTTCATGACTAGGCTCACGAGGACCTGGCC
GGCTAAGTTGGAGCATGAGCTTAGGGATGCTACTTTGTATACTTGTTTCCGAACTTCAGA
ATTGAAGCCAGTGACCTCCATGTAACCCCCTCTTCTCCCACATTCTCCATAGTACCCTGA
TGGAGAAGACAATACCTCTGAGAAATATTGACCCGTTCGATAATTTGTGGTGTATGACAC
TTCATCCCCCAATAGTTCAGATTTACTTGGAAATAGGAAGAAATCATGATGCGCCACACT
TGGTTTGATATACAGCACAATACAGTATGCCAGACACTCCTTATATTAAGCAAAGGGAGA
AAAGCCAGTGCCTGGAAATTTTAATAGAAGGCCAATAGACAAAGAGCGCATGGCGTGCTT
GATATGGAGTTAAGTCCTCGGTTCACGTTCAAGTTATGGCTTCAAATTAGAATAAGCATA
TCATTAGGTTACCAATGTTCAAGGAAAAAAGGCATTACATTAGTACTCCCTCCATCCTAA
AGTAAGTGTCTCAACTTTATTATAAATTTATTGTAAAGGTAGTATAAAGTTGAGACACTT
ACTTTGGGACGGAGGGAGTATGATTATATTGACATAACCAAAGTGCAAGTTTGCATTTGC
AAAAACTTCCTTACGGTGGCTTTACTCAATGAGTTGAAAGTCCAATGTTTATAAGAAATC
TTTCTCATGAGTGCACCTAACAAAAGAGTTGTGTATAACTGAGAAAAACATGGATAAAAG
GAAGTACGAAATGTCATATACCATTAGAAACTGAATGGAATGATATTAAGGAAACATCTC
CTTCACCAAAACCCATGGACCGTGCTATCTTCTTGAAAGAGATAAATTTCTTTTCATCTG
TGTAAACATTTTCTTGGTAAACCTACCAGTACGTTCAAGAAAAAGATACAGCCGGTTAGA
TACACAAAAATTCAAGAAAATTATATAGATTCTTATTAAGAAAGATCCAAAAACCTCACC
TCATCTGCTAGAAGAACAAGGTTTTCATTCCTGCAGAATTCCACTATTTCACACTGGTTT
TCCCGCACAAGAACCTATGTACAATTTAACCACATTAACGCTTTCAGAAAATATAAAAAT
TGCACAGGTCAATGATCAGTGAACACACCTGTCCAGTAGGGTTGCCTGGATTTACAACCA
CAAGTCCCCTAACATTGATGCCCTGAGATCGGGCACCATCCAGCTGCTTCTTGAGGTCCG
AAATACTCACATCCCAATCTCGTGATTCGTCAAGGTAATATGGTACCTGAGAAAGCAGAT
ATTATATTTTTTTTACTACAGATTGGCAACCAGTAAAAACTTAGTTGATGTGGATACATT
TCGATCTACTAACGTGATACATACAAGAGTAGCACCACACAGGATCATTGAGCTTGTGTA
CAGAAAGTGTGATGGAATTGGGCAAAGGATGCCGTCTTTTTCATCTCGTATCAATAGGTG
CATTACCATATGAACCTGTTTGGAAATCGAACAAACAACTCGATTGTCAAGAATAACATC
CGAAAAAAAGGAAAGGGAGAGATAAAAATAACTTGAATCTTGGATGTTTAGTGACATTGA
TCATGTTATCATGGCATAGTAGGTGCTTTAAGTCAATCATCATAATAGTGATAAGAACGA
GGTTCATAAAAAAAGTAGTGCTAATGACTAAAGTGCAGAAGGAGCTTCCACAAAGTAGTT
TGACAGCGTATGAGATATAACACTGTCAGGATGCCCAGCAGTAGCAGAGGAGCACAATAT
CTCCAACTATTATTCAGAGTGTTATGCATAAGATGGTGGACGAAGGAATTGCTCCGCATA
TGGTGGATCAAATAGTACCGGCGCGGATGCTCCATCTGTCAGGAAAATGTCCTCCGCATT
GCATGGGAAAGCATCACGAGTGGCTATTCCAGCAGCAATTGCATTTCGCAACCCTTCAGT
ACCCTAGAGGTGAAAAGTGTCAGGTCTCATTTCTGCATTTGTGAAAATAGGTTCAGGGTT
CCCGATCTTGCCTGACAGTGGCTGTATCCTCCCATTGCTCTCCCAGGAATGAGGTCTAAT
ATCTCTCTTGCCCTTGTTATTGCATCAGAACTGCAACAGAAAACAATCGAGTTGAACTAC
CGCTTATGAATATGAATGCATCTTGCCCATATGATGCGTGGTGTTAATTACCTGAATATG
GAACTAGTTACACTGCAGTTTAGAAGATGCGGGTAATCACACAAGGCAAGAACCTGGAAG
ACAAGAAAGCATCAGAGCATGGAGAAACGAGAATGTTAATACAAGAGTTCATATGGAGCA
AATCGCCAACCTCACGGAAGAACTTAATTGGCTGTTGTCCGAGGTAATGTGGATTGCTAA
GGTTGCAATAGATTATCTGCCGGAAGAAATGGAAAAATTAATCACAGTAAAACGATAAAA
AAAATGGTAGGAACACTAACAGAAGTAGATGATATTTGGGGAAAGTTTCAGTGGAAGATG
ATATTGAATTGTTTTTCAATGATGTGATGAGGTCCACAGGAATGTTCAGTTTGTTTTGCA
ATAACGTGATGGGATTCACAGGAACATACCTCATTGAAAGGGTATACACCTGGATTTGTT
TCTAGCTCTTTCTGCATGCGCTGGACACCTCACCAAGGAACAGAAGAGAGGATCACTTGA
TTTGCATGATCTGCCAAAGCTAGGTGCAAAATACTACTACAGTAGTAGAGTGGCAATTTA
ACATGGCTCTGTCTCGTGTACAGCGGCTCAGACACACACATATACGGATACAGCAGCTTC
CGTTTCTCTCTCAGGGATTTGAATGTCTTGGAAAATAGCGATTTTGGGGATGATACCTGC
GCGCGGCGGGCCACGGCGCCCCCGAGGTGATCCGAGAGCGCCAGCACCTGCAAAACCAAC
CAGCCACCAGCAGCAGCATTGGACTTGGAGCACGGAAGCTGCTGTGGGTTGTGGATCGGA
CGGCGGCAGAGGCCTGCTACGTACGTACCTTTGGGTTGAGGGAGTCGACGGTGAGGGCGC
GCGCGGAGGCGGGAGACATCGCCGCGACGACGGCGGGCGGGGGATCAAGCGGCGGCCTGG
GAGGAGTGGGTGGCAGGCTTGGTTTGTTGGTTCTTGGTTGGCTGCCCAAGCCACAGTCCA
AAGCTGCTTCACGTCACGTGGTACAGGAGTTGCTGTCGGAAACAAAAGCAATTCTGCAAC
TCCATTATTGTTCTTGTCGCTGTTGCATCAGAACTGCCATGCCATCTCGCGAGTCGGGGC
GTACGTAGTACTTCTTCGCCGCGAAAGCCCGGGAGTATCCCCGGCGATTCGGCAAAATTA
CAGCGGAGCCGCCATCGAAGCCGATCCAACGGCTCTGCTCGCTCCATGCTAGCTCAAGGG
GAGGCGCTCTGACCGTTGGATGCGTCCATTTACTGTTTGCCGTTCGTAAACGTCTCTCCT
GGTTACTTTTACCGCCAATATCAGGAGTTAAACCGAGACTCTTTTCTGAAACTAGTAGTA
AGTGTAAATGCACGTCTCGATTAATATATAAATATATGTTAACATTGACATGAATAAAAA
TATAGTTTGATTGCATTAAATATATTACAATTCAAAACAACATTTTCAAGTAGCATCACA
TGCATAGAGAAAAAAAAATACACTATTATCTTAGTATTTTCTATGGTAAACCTTTTCAGC
CGACGTGGAGCGGTCTCATCCACTCGCTCGTGGCTACAGGGCCTACCACGTTATCTCTTT
CCTCATCCCCGGGTCCTTCTCTTTCCTTTTTGCCAACCTCCCGGTTGCCATGGGAAATCC
TACCCCAACGATCTCCTCCAGCGAGCACCCTCGAAGCCTACCACCGAACCATTGTCCTCC
CCTCGATTTCCCCTCTCTCAACTGCTCTATGGCGACCGGAGCTGCAACGCGCATGGCCCG
CTAAGTCGCATCCATGGCCGAAGGCGTAATTTACTACATGCTTCAACCGGCATCGAAATT
TGATACAACCGACACCGCATTTTGCTACCACCGGTGTCGCATTTGGCTACATCGCACATG
GCGTCGCGGCTTTTGCTACAATCGGTGTTTCATTTTGCTACAACCGGCATAACGTTTTGC
TACATCCATCACGGCTGAGCTGCGACCC