Contig Data
morexGenes
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Map Locations of contig_138694 (4852 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_138694

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7137 1 1856 bp MLOC_7137.1 Available Available LOC_Os03g38800.1, FRAME:+3, EVALUE:0.0, 13103.m04212 protein AAA family ATPase, putative, expressed





CDS Structure of MLOC_7137






Contig Sequence (4852 bp)

>contig_138694 4852 assembly3_WGSMorex_rbca.fasta
GGGATTAGGGGGTGAATTGTTGAACAAGTAATGCCCTAGCCCGGCGTAGTAGATAGGTTA
GCTTTCCCTTTCTTCAGTTAGCAGAATAAGCGGGACGATGACCGGCAGTAGTATAGGTTA
GTTTGTTTTTTCAGTTCAGTTTCTGTTAGAGATTATCTAGCTTTGCGCGCCCGTTTACTG
AGCATGGGATGGCATGCAGTCGCAGCTGGTGGGCGCGATCCAGCAGCATCGTGAGGGTCG
TGGGATGGCACGACCATTAGACTCGGGAAGTGGTTGATCACTCGTTGTAATTCTGTTTTC
AAATAAGAGAAATAGAAGAGAGAAAAGCTGCAGTTTTGCACGCAGCACAAAACACTGTCT
TCGTCTACCTTGAGCTCGGTCTGATCCACGAGAGAGAGAGCGAGCGAGAGCACTCCGTAG
GCTTCGGTTCCAACAAGGGAGAGTGTGGGTGAAATAGAGAGAACGGCAGGGGGTTTCTGC
AAAAGTGTGGGGCAGGACCGGTCCAGTAACCTGGCTGCCACTTGGCACGCTGTGATTGGC
CCAGGACTAAAATGTCACATGTAGTGCAATTTGTGGGATGGGTGGGTCATGTTTTGCAAG
TTTTGAACCAAATCATCACATTCTGCGCAAGTTGTAGGACTTGGGGTGCTTTTAACTCGC
ATGCTACAACCATGGAATGCCAAGTCTTAACATGCTACAACCATGGGATGCCAAGTCGAA
AAAGTGCTTTTACATATCTCGGCTTAGTATCGCTGGGTACTACCTGGTCAACGGTCAAGA
TCCTATGCCACTTGTAGACAACATCGGACTCGTACTTTAATTTGGTTGATATAATGGTGA
ACGCGTGCAATATGTCAACTCTACACTTTCGTCACTCCTCTCCTTCGTAAAGTGCGAATT
GACTAATAAACTTGACTTTGAAAGAAAGTGGTCAACCGTGACAGACCCACACATTCATTC
GCTGTTTGGGACCTTGTATGCTCCCCGAACAACAAATGAGGCCTCGGCTTCCTAAATCTT
AAAATTCAAAACCAACCTCTCCTCTTGATGGTCATACACAAGTTGATAATCCCTAATTAA
TGCTACTCTGAAACAAATATGTGGCATCAATGAATCGTACGTTAGTCATACACATAAATC
CATACGATCAATATTAGAGACTCATGAAAAGATATCACAACACAACTCTAGATACAAATT
AAAGTCATACCATCTTCATATTACAATCCACGGGCCTCGAGGACACGAATACATAAGCTT
GGATGCAAACGAGTCAGCGAAAGCAAATAATATCTAAGTACAAACATAAGTCACAATGAT
GGTCTCAGTGGATGTATCGTGGACGCCAACGAGGCGCTCGTGGCACCCGATAGCCGTCGT
TGAGGCCAGTGCACGGGGCATGACCAAGGCAGCCCTTGACGATGCAATTGCAGGCGCGAG
GAAGGGCTGCTCAACCTCCTTGTCGTTGAGGTCGACCACGAGCTCGGGATGGACGGTGGT
GGCAACGTCATGGGATCCCACACTGGTAGTTTGACAGCGGGCATGGTGTCGTCGTCGCTA
GAATTGGGACAAAATGGGAGAAATTTGAGGGGGAAGGGTGGTGCCTATCTCTGTATACCA
GATGCTAGGTACTGATGATGGATCTCCTCCTCTTACTAGCAATAATTCACAAGACACGAT
CTAGTGTAGCAATTACAATTTGGATACAAGGAATGGAAAAACAGAGAAGAACTTGCATGA
GAGGAAGAGAGAAAGGGAGCCGGAGGTAGGAGAAGGGTAGCCGCCGTGTGAGACGTGATC
CACTCGATGAATCGTTCATTACATCTCCTCCTGGTACTTGTAGTCAATGGCAGTTGCTGG
TTTATGGTCAGGCCCGACCCATGTACGAGTCCACTGACAAGCCCGTGTATTTGTAGGAAC
GGTTCCTAACAAAACCATTATAAACGGTTGTCACGCAAGAACCATCTGCGTTACGCGAAT
ATCACAGATAGTTATAAGAATCGCTTGTGCCACCGCGAGTGTTAGTGACACATGCTTTTT
GGTGGGAGTAACCGACATTGAACCATGTATCAAAACCGCCTTCAAAGCTTAAAACTTTGG
GAAACGTTTGGAACTGGTGCGCCGGTCGAACCGTTCGGGCGGTCGCACGCGACCCGCGCG
GATGGCTGGCCCAGTCATGCAACATTTTTCGTTTAGATTTGTTGCAACCAACTTTAAAAT
TTGCTATAAACGTTTCTTATTTGTTACAATTTGTTCATTAACAAGCCGCATCCACATTTG
GTTGTAACCCGAGTTCGTCGAATTTTTTCGTTACAACCGGCGTTTGATTTTTTGTATAAC
CGGTGTTAATTTTTGCTACAATCGGTATCATTTTTTTACTACCATCGTTCACTAAAAAAT
TTGCATACACGTTCGTGAGAGTTGCAATCTGAGTTCACCGGATTGTTTTGCCACAACCCA
CATTTTTGTTTTGCTACCATGCATCATCAGTGTGGTTTTTTGCTACAACCATGTTGATAT
TTTTGCTACGACTGTATTTTTGTTGTATCTGTGGTCGAAATTTGCTACATCGCTGTTTAT
TTTTATTTCAATCGATAGTTTTTACTGCATGAATAAATCTGACGATCAAACCAAATTTGA
TCTGACGGATCAGACAGCTCGCGTGCAGTCGGCCAAAAGTTACGACTGATGCCTAAAATT
TTGTCTAAAAAAAATATATCAATTAAAAGCTTGGAGCATCTTCAACAGGATGTGGGTCCG
TCTCCCATCGTAGTCGGGCGCGAGAGACCGAGAGCCAGAGGGAGGGAGAGTGGTGAGGAT
GAGGTAAGTGAGGATCCGTGGAAGCGTTCATTCTCAATAACCAGAAAAAATTTGTTGGGG
CGCTCCAATAAATGATGATTACGGTTTTCTTAATCGGTTGGAAATGTTCTTACAACACCC
CCTTCAAAAAGGCTCTCTGCATTTGTCCTTGTTTTCTCTGAACACACAGACCATGTCTCT
TCTCTGCTACTACCATGCTACGCATCGTGCTTGTCCTCCGGCTCTTTTACTGCCCCACTC
CGTTCTTGGAGGAATTCCATCAGTACCTGTAGCGCAACATCGGCGTCCTCGCTCCGTAGC
AGCATCTCAGACACCTCGGCGGGCGTTACCTCCACCACCGCAAGTAGTTCCTGTATCCCT
GGGAACAGAGGGTGGCCGTCAATGAGGTGATAGTTCCAGGCCAGCTTCCTGAATGCCTCC
CAGCAGCAGTAACCCATATATACATGCATGTCCATGCGCCCCGGCCGCAGCAGCGCCGGA
TCAAGGCGATCCTTATAGTTGGTCGTGAAGATCATGATGCGCTCCTCGCCGCTAGTCGAC
CACAACCCGTCGATGAAGTTGAGCAGCCCCGACAGTGTTATCTTGCGCTCACCTCCCGTA
CGGTAGTCTCGGCCGTCCTCCTCGTCCTCCAAGGAGTGGTCCTTGCGATCCTCTCTCGAC
ATCGTGTCGAAACTGCAGTCAATATCTTCGATGACAAGGATGGACTTGTTGGACATGTCG
ATGAGAAGCCTCTGCAGTGATGAGTTGTCGTGCACACTCGAGAGATCGAGGTCGTAGAGA
TTGAAACGTAGGTAGTTGGCCATGGCAGCGACCAGGCTGGACTTGCCGGTGCCAGGGGGG
CCGTAGAGCAGGTAGCCGCGTTTCCAAGCCTTCCCGATTCGCTGGTAGTACTCTTTCCTC
TTCAGGAACCGGTCGAGGTCGTCCAGGACAGCCTGCTTCAGCCCTGGATCCATGGCGAGC
GTTTCGAACGAGGCCGGGTGGTGGTGATTGATGCCTTGCCACGACCCGTAGCCGTAGTCG
TTCATGAAGATCTTGAGCGCGCGGTCCTGCCGTCGCAGCTCCTCCGCTGTGGACATGATG
AAGGGCACGTACTTGTCAAGCGCGGTGTCAGTCTGCTCTGCGTCGTAGCTGAGCTCTAGG
ATCTCGCCGCCACCCTTGACCCTATCGCCGTCGTCGCCGCCAGCCTCGATGAACATCCAC
CGGAACTCAACGCCGTCGAAGTGGTCTGTGATGGAGCCCCCATGCTCCATAGACAGGAGA
GTGCTCGAGCTGCTGCTCCCGTCGGGCTCAGTGGTGAGGGAGCGCCCAAGGCAGAGGCGG
GACATGGTGCGCGGATTGATCTTGGTGGCCAGGTACGTCCGCGCCGCGTCGAAGACGTCG
TTCTGGCTGGACGCGTTGTCGTAGTGGCATTGGTTCTTGTCGACGGAGCGGCGGATGACG
ATGGTGTGGCGCTCCTTCTCGCGGGCGCCGAAGCGGGAGCACACGAAAGCCGCACCCCAG
TGCACGGCCGCGCGCAACTCATCGGGGAGGAGCTCCCGCGCCATGCCGCGCGCAAGCATG
GCGTACGCGGACACCGAGGCGGCGGTCGCGAGCGCCTTCTTGAATGCTTCCACCGCCCCC
TCCGACGGCGCCGCCATACTCGTCATCGTCGGCAAAGAATTCTCCCGCAGGTAGGGTGCA
AATGAATCAATGAACTGGATTGGTTTCTTGCTTCAATATCCGTCGCTTTGCCTTGCCGGC
ATACACCCCCCACCCCCGTGCATTTTATAGTACTATTGCAGGTTAGATCGCCGGGGTCCA
ACTCTTGCAGATTCTACTCAAAGTCCACCAGGAAACAGATGTTCTACTCGGTTTCGGATC
TACAGGATAGTGAGTAGTTGGGTGAAACGTGTAACCTTTCCTTAGGCTGCTCATAATGGA
GAGTAACCAGGAGTAGTAACATAATGTTGTTACTACTCTATGTTACTACCTTCATAGTGA
GGAGTAACATACATGTGGTGTCATGCAAACTAGCATTTATTAGGTTATAGAC