morexGenes - Barley RNA-seq Database

Contig contig_138641
Source Contig contig_138641
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_138641 (7015 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_138641

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7094	1	854 bp	AK363882	Available	Available	None
MLOC_7095	1	502 bp	MLOC_7095.1	Available	Available	None
MLOC_7097	1	1278 bp	MLOC_7097.1	Available	Available	None
MLOC_7096	1	793 bp	MLOC_7096.1	Available	Available	None
CDS Structure of MLOC_7094

CDS Structure of MLOC_7095

CDS Structure of MLOC_7097

CDS Structure of MLOC_7096

Contig Sequence (7015 bp)

>contig_138641 7015 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCGACGCGCCCTACACCCTTGTGACCACATGGTGGGTCTCTTGCTC
CTCCCACGAAGCTTCGGGGGTCTCTTATGTTAAAAAAGTCATCCAAAACTTTCGTCGTGT
TTGGAGTCTGTTTGGTACAGATTTTATGAAAAGGTAAAAGATGTAGAAAACAACAAGTGG
CATTGGACACTGGGTTAATAGATTAGTTCATAAAAATGATATAAAAATACACCAAAATTA
TATAAAATCATTGCAAATATGATATTAATACTTTATAAATTATAGATACGTTAAAGACGT
ATCAACAAATTCTAAGAATTAGTTGGGATATATTTCTTCTTCTTATGATCTCTCTCAACA
AGAGTTGTCTTTCCCTTCCACCCTTCACCATACCCTTTCTCTTCGTTCTCTACAGGTTGG
TTTTCATAATTCATATCAACCCCAGAAACTTCAGTCAACTGAGTAATCTCAATCTTCTTG
TAAACCTTTTGTTGTTCCCCAAGGCTACATTTTCTTTTATTTGACTATGATTTCACTGGT
GAATTCAATTCCGCACGAGGTTCCCATGCACTAGAAGTTGCATTGGTGTTCCTCTTTGAA
GTATTCGACCTATCTCTTAGTACCTAGTTACTTGAGTGTCATATAGAAATAAAATTAAGG
TAAATCATGTGGATTTTGGAAAAGAAATTGTATCTATACGCTAAGAATTTATCTTAAATA
CTCTCCCAAAAGCAATAAAACTCCCAACAAATCTACTATCTACTATTCCCTCCATCCCAT
AATATAAGATGGTTTTACAAGATGTACTATTTATAAAAGCACGCGGATGATCTGAAATCA
TCTATATCACGTTGCTCCAGTGATGTATCCATTACATCATAAATAATTTGAAAAAACGTG
TTATTTGGACTAATCATATTCTGGGAACAAAATTAATTGTATTTAATGCAATTAATCTAG
TTTTAAACACAGTACAATCAAAGTTTTATATATATACGAGCATACATTCATCCATATAAA
CACAAACGTATACCCTATCGCTATTAGCACGTTCGAGAGACTGAGCCGACACATATGCCA
TTGCAATCGACGACGTCTCATCTCACTAAACGCACATCACCACAATGCCTCGAATAAACT
AAAAAAATATGAGCACCAGTGTCAAGTTTGGGACTAAAACTGTGATGATCAACGGATACT
ACGGTCCTCCTAACTATCAAATCACATGATGGTTGGCAAATGCAATTGATCTTGGAATTG
ATATTAATGACAATCAACTTAAAAAAAAATATTACTGTCAAATTGAACGTTTTTTTATTG
AACATAGTACAAATGCAAGCGATCATACATACATGCATACATTCACGGTTATGGATGTGC
ACACATCCTATTTTTGTGAACACTTTTGAAAGACTGAGTCGACATATCATCTTAAGATTT
ATGAAATCACCATAGGCGCCTCGTCGAAACGTCTCCTTTCATTAAATGCACAACGCCGAA
AATTCTAAAATAAATTTAAAAATAATACGAGCATCATAACTAAAATTTTAAGGGGACTGC
TACGCGTCGGTCGGTGGATCTTTTTAAAAGATCCACCACCTCGCGCGACGTTGGATCTAG
CAGGATGAACATTATTTCTACTTTACAACAAAGGCCTTGTTTCAGAAACATTTATGATAG
AGATTGTATTGCAGAATTTTTATGCAACATAGGTTGTGTTGCGGAATTTTTTTGAAACAC
TGCTTGTGTTACGAATATATATTTTTGCAACATGGGTGTTGCTTCGGAAAAAAAAATTGC
AACACACACAATGTTGCAGAAAATATTTGCTGTTTTTTTTTGCTTTTTATTTTCCGCAAC
ACAAGTGTTGTTGTGATGGGCAATTTTGCAACACACAAAATATAGTAGAAAGAGAGACGC
AAAGACACGCATACGTGGGTCGCAAAAAGAAGGTGGCGGATTGCTTGTGTGCGATCCGTC
GGCTGAAGGTAAGCATTTTCCAAATTTTAATGGACTGAAGATATCACTGTCTTTTTAACC
ATCCATTCAGATTTGTTCGCAACGACAGATTAGACGTGTAGGTACACAATTACTAGCCCC
GTCTAAATGAAAACCTCCCAGCTAAGTAATCCGCTATCCGGAACCAAACTCACACCTCTT
TACCGTGTGGTACGTTTTAGTATTTTCCTTTTCTCTCCCCTTCCTTCCGAGCCTCTCGTG
TCCTGACCTCCTCTTCCAAGTTCCAACGCGGCGGATCTACCCTCGACTGCCGCTGTGCCG
CCCCAGCGTCACCACCGGCGCCTCCTCTCGCCACTCGGAGACGGGCGTCGTCGCCGCCGC
CACCGCCGCCGCCACCGTCACCGTTCCCCTTCTTCCCCGCCCCCCCTGGGAGATCCTGGC
CATCGGGTCTCCTTCCTTCCTCTGAGGTACGAACAGCTAGGTTGTTTTCATCACCGCAGC
ATCAGCCCTCTTTGTTTCCGAATCAACCAATTCCACTAGGATAGGGAGAGGACCTTCACA
ATTTATCGGTTTGCCGGCGCACATCCGCCACGCCATCCAGATCCGCCCTTGGCGTGGTGC
TAGGACGATCCAGGGGCTTGATTCACCCGTGCCCCGTGGTGTTTGGCGTGTGAAAGATGG
TGATTCGGGTTCGCCAGATCCAGCGTTTCACTTCGATGTAGAGCCCTGATCCGCGCGGAT
GCCGCCTGTGATTTTTTATTTGTTTTGTTCTGAAAAATACTAGGCACCGGTGGTGTTTGA
TAATTCCAATGCCCAGCGTGCTCAATTTAGGTTACTCTTTAGATCTGAAGCATGTACTGG
AGTTTCTCTTGGTTTGTTCATATTGGTTCAGTACTGCGTCTTGTATTTTAGTTGCGCAGG
TCCTGTACCTCTTGTATTTGCAATGACTAGATTCAAGGAGAATTTTCTGAAAAGTTAGAA
AGGAAGGGTGTATGTCTGATCCAGCAAATTGCAGGCTTATGCTGAGGGTTTTCAAGCACT
GTTAGGCTGTTAGCAGTACTAAGTCTACGGAATACTTTTTGCCACACTAGCATGTCTGAT
GTTTTTTTTTTGTTCCATCCAACTGATGTTGGTTGCAATAAAAGCGACTATGCATTATTA
TATAAATTCCTGGCAAATTGATTTGTTGCTTTTCTCCATTATTATTACTGAAACAATGGT
GAGGCTAGGGAAAGCACAAGCCTTTCTCTGTATCTATTAACCGTGTTATTGTTCTATGAT
TGTCTGATGCAGTTGGTCTCTGTACAATCAATGGTGTCATCTGGTCTGTGTTTCTGAAGC
TATCTCATTACTTCATTTTTGAATTTTGATTATGCAGGGCCAAAGTTTAGCTTGACGCCA
ACATGTCGTCGAAGAAGATAGAGCTAGACCACAAGGACATGGTTCATGATTCTGCCATTG
ACTACTATGGGAAGCGCCTTGCCACAGCTTCCTCGGACTCCACTGTGAAGATCACCAACA
TTGGAGGTGCATCTGCCCCGTCCCAGCTCGTTGCCACCCTCACTGGCCACTATGGTCCTG
TATGGCGTGTTGGATGGGCCCATCCCAAGTATGGTTCAATTCTGGCATCCTGCGGCTATG
ATGGCCGTGTGATAGTCTGGAAGGAGGCTGCCACTGGGCAATGGTCTCAGCTCTATGTGT
TTGACAACCACAAGGCCTCAGTTAACTCAATTGCTTGGGCTCCATATGAACTTGGCCTTT
GCCTTGCCTGTGGGTCTTCTGATGGCACCATCTCTGTCATCTCCATGCGGCTTGATGCAG
GAGGCTATGACGCTGCAACCATCGAGCGGGCACACCCTGTTGGAGTGACAGCAGTCTCCT
GGGCTCCAGCAGCACCCCTTGGGTCCATGGTTGGCTCAGGTCAGCTCGTCCACAAGCTCG
TGTCTGGTGGCTTTGATTGCGTCGTCAAGGTGTGGGAGTTTGTCAATGGTGGCTGGAAGC
TGGAGAGCGCTATGGTCTCCGACATGCACAAAGAATGCGTGAGGGATGTTTCATGGGCAC
CGGTCCTGGGCTTGGCAAAGTCAACCATTGCCAGCGCGTCCCAAGATGGCAAGGTTGTCA
TCTGGACCAGTGGCAAAGCAGGAGGCAAGTGGGAAGGAAAGCTCATGCGTGACTTCGAGG
CCCCGGTGTGGAGGGTGTCCTGGTCCTTGACGGGAAACATACTGTCGGTCGCTGCCGGCG
AGGGCGACATAACTCTGTGGAAGGAATCGTCGGACGGGCAGTGGGAGTCGCTGTGGACCA
AGGCTTCGGAGGAGCCGCCGCAGGAGCAGGCCGCGATCGAGGAGGCCATGCAGTAGGGGG
GAGTCGACGCCATGTCCCCTGTCTCGATTTCAGACCAAAGCCATGACTTGCTTTCACCTG
CTGCCCTGATACTCATAGAGATACCCGTTTCCATTTTTTTTTGCCGTTTGTTTCTGCATG
GACAATGTCTGATTGCACTGTTTAGTTTTACTTTACTGGTCATGTACTCGTCGTGCACAC
CGTCAGAATGTATTGGCTGTTTGAACTGTTCATATCCTGCGCTAGCTGTTACCAGTGTTA
TGTATACTCGCGTGTGTACAGCTCCATGTTTCACGTGGAAGTTTGTTACGACCACCGGGA
GCGCCGCCGCATCAATGGCTGCCACACCGTGGGTCGATGCCTGGCTGGTAAGGTGTGCTT
GTGGCCAAGAAAGAACCTGAGAGCAACTCTAGCAGATCCGTCGCGTTCCTTCCCCCCTCC
GCCGCTTTTCTCTTTGCCTCGCCACCGTTTCCCCGTAGTTCCGGCGAGCCATGTGGGGAG
AAGGCCGCATACGTGGGGTCGTCGCCTGTCCGGCGCAACGCGGAGGACGGCATGCAGCTC
CAGCCGTGGCGCTCGGAGCAGGCGCGCAACCACGACGCCCTCTCCCGCAACAGCCACCGG
AGCACCGTCTACAATTCCACATGTGAGTACTACATCGACGTGAAGCCGCCTCCGCCCTCC
GTCGTTTAGGATTTAGTTACTTTGTGTGCGTGAACTATGTGATGAACTCCGGTGAGGTCC
GGATTATCCAATGCAGCGGGATTTTATCTTAAGTTTGTAAATTTGCATGTGTCATTTACG
GTATTTGTTCTTTGCCAGGCAAAATGCGCCCCTAAATCAATTTAGGGCGATGTTAATCGA
GTTTGTGGGTCGAGATAATGGCCCACTTCTTTTCGCTCAATTCTGATGATTCTGGGTTAA
AAAAAATCAAAACCTTAAAAAGACTTGATTTGATTGTTTAAAATCATTTGAGAATAGCTA
AAATTGGGAGCGCAATCAAAAATCGTCTGAAAACCTTGCTTCAGACGGTTCTGGACGGTC
TCACAAAATAAAACGGTTTAATTTAAGACACTTATATACGTAACTATTTAAAATGTACTT
CCTCCGTTCGTAAATATAAGTCTTTGTAGAGATTTCACTAATGAACTACATGCGGATGTA
TATANNNNNNNNNNAGAGTATAGATTCAATCATTTTGCTTATGTAGACCCTTAGTGAAAT
CGTTTAAAAGACTTATAATTATTTAAAATGTAAAGTACAAGAGAAAATGGCACTGGTGGG
CAGCCGCACCCAGGAAAACGAGTCCCTCGATCCCCCACCTCCCAGCTCGCCCTCGCAATA
GGGTTCCAGGGCCGCCGCCCCGCCCGACGCCGAACCTCCGCCCCGTTCCTCCGCTCCGCC
CGCTCGCTCGCCTCTAGGCCCGGAGCCGCTGCTCCGCCCTGTCCGCTCGCCTCCTGTCCC
GCAGCAGCTGCTCCGCCCGACTCCAGACGCCGTCGCTGTCCGCCCGGCGCCCAACCCGCC
TCCGCCCCACGCCGGAGTTTGCTCAGGTGAGCTCTCCTCTCCTCTCTGTCTTCTCTGTCC
GTAGTTCGCATACAGAAATTGATGGACGGGTGGACTGCTGAATGGATGGATGGATGGACT
GGTGAATGGATTCATAGATGGATGTATTCTCTGTATAATTTGTCATGCTGTTCAATCTTT
GTACATAGAAAAACCAATAGACGATAGATGGATGCATTTGTCTGTACAGTGAACAATGGA
TGGATACATGGATGTATTCCTCTGTACATTGTACACTGCTTTGGTATGAGTATTTAGGTA
GATAATTTGCTAAAAAATCCTTTTGCTGCTGCTATGTGCTAATGGATAGACGTTGTACAT
GGAGAAAGTTCAAAAAATCAAGCAACCTAAAGCAAACTGGGACAGTGCGGCGCATACCAT
TTATATGGATGCGTGTGTAGAGGAGGTGTAAGCTGGTATCCATTGACGATAAATTGTAGT
GGAACTTCTTTTGTAGCAAAGGAAACGTCGAAAACCTTCTTTATTGTAATATTTATCAAT
CTAAGATATTCATAAATCGTATCCATGCTCATATTTGACGATAAATTATTCGAAACATCT
AAGTGTTAGCAATTCAACATCTAATTTTTCTTCAGGGGCGTTACAGACATTTCAGCATAC
AACTCGTCCCATAATCTGAGATCACAATCTCGGAAAAGAACTCGACACCTGATTCTGGCT
GATTCTGGGGGAAGCTGATTCTCGGGGAAGTTTCCCAAAAGCTGATTCTGGAGAATCAAA
AGCTAAAAGGAACTGGGCCTATAGCGGCTCTGTTAGAGAGATGCTCTTACCGCCTCAGGG
CTTGATTGAGAAAACAAAACTTTGCCCCCTCCCTTATATGGCCCAGACCAACAACGGGCC
TCTCAGTCCATCCCAGGCCACATCTCTGCGCTGCTTGCCCCTAAAAAAAAGACAGAAAAA
ACATCTCTGCGCTGCTTGCCCCTAAAAAAAAGACAGAAAAAACATCTCTGCGCTGCTTCG
GCTCTCCCCTCCCACCGTCCTCGTCTCCCCGGGGATTCGCCGTCGCCGCCCGCCACCGGC
CTGTGTTGGTGCTGCCCCAGCTCTTGCAACTTGGAAGAGCCCTGGCACCACTACCCTCCC
GCTTCTCGCATGTGTACGTCTAACGTATCGTATACGCAGTAATACCGCAGATTTA