morexGenes - Barley RNA-seq Database

Contig contig_138607
Source Contig contig_138607
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_138607 (7568 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_138607

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7077	6	1504 bp	AK250566.1	Available	Available	None
CDS Structure of MLOC_7077

Contig Sequence (7568 bp)

>contig_138607 7568 assembly3_WGSMorex_rbca.fasta
CCTCTGCGGGAAATTGTGTAGCTTTGTTTGGGATGACGTAGCGATGAATACGTTGGACTG
TTTATTAGTAGTAGAGATTTGTTCACATCAAGATAGTGTGACAGGTTCTGCAGTCTACTG
CGGCGTAGTTTTCAACTCGGATATCGTGTGTGTGGGAGAGGGAATGCTTTTCTCCTTAAT
TTGTAACACATACCCTTTTTTAAAATCTATTTCGAGTGTTATGCGGTGGTGCCGTTTTAA
TGATTTTCTTGGTTATATCTCCCCAGTTGCCCTTGGAGAAGCTGATCTTTTTTATAGCGC
ACATAGTGAATTCATACCCAGGGACCTTTTTTCCCTCCTTTATTACAAAATAAATAAATA
ATCACTCTTATTTGAATTTGAGCCTTGATTCACATTTGAGGCTTCCATGGCATATGAACT
GTGCTAGACTGCAGCAAGTGTAATCTTCAACTTTACTATATAAATATTTATTTATGTGAA
TAATTTACATATGATTAATTGGTCGACTGTGCCCCCTGCAATACAGTATGTGCACTACTC
AGCGAATACTAATTACAAGCTGTTGCTGCTCCTCCTGGCTACGCCTGGATGCATTCCTTC
TTCTTTGCTCCTGCAGAAGCAGAGGAATAAAGAAGATATATGAGCATGTCAGTCAACCGT
CATGTTCCTGAACGACAGGGAAGAAGAAGTCAGGAGCCATGACTGACCTCCAGCAGCTGT
TGCAACTGGTACTGGCGCCGCCCGTGCTGGATCATTCGGACCACTCTCATGACGGCGTAG
AGCGGCAGCAAGATCCCCGTGGCCCGAAGAAGGTACATCTGCAATGCAAAGCAACACCCC
TCGGCTGTTAGTTACATCGTCATGTGATCGCTCTGTTACGGTTAGTTCACTCTGTTTTCT
TCTTTTCAGATGGAAGCGTGCCGACGAATGTGGGTCACTCACCGTGAGGAGGCTGAACGC
GCAGTGCTCCGCGGCCTCGATGGTCACCACGGCGATGAGATGCCACACCAGCAGGATGAT
GGTGAACTGCGTGCACAGAAACTTCAGTGAGGTCAGAACCCAGGGCACCATGACGATGAA
CCTTGACAAAATGGTTCAGTTTGGCGCCAAGCCGACGGGTCGTACCGTTATCGCCAATGG
CCGGCACCACGAGCAAGCGGCGGGATCCGGGCCGTCCATCGGCGTGTCGGACGCCGCGTA
GTGCATGCCCAGCTGCCCGTGCAGCTCCTCCTCCTCCTCATCATCATCCTCATCCTCGCT
GCAACAAGTACAGCAGCAGCATCAGGCAATGTTCAGCTGCTGGACGGTACATCATTCTGC
TCTTGCCGTGCGGGCAAAGGGACGATCCACGGTAGGTGCAACAGCGTCGCATTAGCTGGA
ACCAAACAGGAGGTGGGCTGGACTGGACTGGACTGGATTTGGATGGGCATTGACATTGCC
GGTTTGGACGCACGCCTTTGACAGACAGGAGGCCGACGCCAACGCCAACGCCAAAGCAAC
AGCCCACATGTACAGGTGAGTGTATCGTTTGTACCGACCGCAGCTGGCTGTCTTTTCTCT
TCGTCATCGGCATCAACACGGGATCACAGAGAACCAAATCGGTGCTCACCACCTACCGGG
CGTCGCCGTGTCGGGGCGGCCGTACGGCGAGGAACGTCGAGTCGCCGACCCGACCCGATC
GGCGACACACAGTTTTGCGACGCTGGTGCTAGCTACTGGGCTTCTTCCTCCACTGCTACA
GCGATGAGCATCGCTTGGATCTTACTACTGCCATATTGATGATCCGAATCCCGTGGTCCC
TGAGCGGCCTACTAGATCGTAAGGTATACCTGCCCCGTGGGGCCTGGGATGGAATTAAGC
TGATGAGGTCGGTCGACCTGGGGCTGGGGGTGGGTATCTACCTGGCTGGCTCACCATTTT
AAATATGATCAATGGCGACAGATCTCATCAGCAACCCCTCCCCGGTGGTTAGCTGATTGC
CCCTGCATGATTAGTTGCTGTTCTGAAAAGAATGTGGTACCTAATCATATGTTTGTTTGT
GTATGAGTATGACACCGGCGGTGCTGCTACTGGAGATAAGACCGCTGCATCATGTATACA
TATATACTGGCCAGCTTGGCTTTGGTCGGATTGGCTGGCTGGCTGGCCTTATCTCCTAGA
CCTAGAGACTAGAGTGTGTATCTGATCTATCCATCCATCCATCCATCCATCCATCAGAAG
ATTGAATTGACAATGCAACAGTTTTTCCGTTGGTCTGTTTTGTACTACCATAGCGACAGA
GGGAGGAGTGGGGCCTACCTGACAGTAACCAGCGTCTCGACCACCGGGGCTTTCTTGGGA
GGGACTGTGTAGCCTGGCTCGAAACCCTGCCAGCAAAAGCATTAACTTGATGAGAACACC
AAAGGTGAAACAACACTTTAAACGGCTCCAAACTCTGTCAAGAAATGAAACTCTGTCAAG
GAAAGCATTGACACGATTGTGAAAACGCTAGTAAAGAAGAAGACATTTTATACATGACAT
GCATGTGGTGTGGCGTAATTGACAACGGCGAAAGCCGGGCAGAGGATATTATTATACACG
AGGACGTTGCACCGGCCGTTGATTATCACACAAAAAGGCTAGAGCCACTTTGTTCCTCCT
CAAAGGCTCCTCTATTGCTTCGCATGTACAGAATCAAGTACCACTTGTGGGCGCTTGATC
ATCAGGATTATGAATCATAAAGCAGAGCTAGTGGGCGCCTGACCCACAAAGCCACACCTC
ATTACTTTATTAGCTTTATTAGGTTATATACCTCTATCTAACATCACATTCCATGGACGG
ACCAGCAACGGGCCGAAACGGAGGATGCGATCACAGTCAGACCTTTGGGCAACACAATTC
CCGCAAGAAATCGAAGAGCGGAGCGTGCGAAAATGGCGAACCGACCTGAAGGCAAATCTC
GCAGAGGGTGCTCCCCTTCTCGTCGCACCACCTCTGCACGCATCCCCTGTGCGCGTACTG
CATACAACGCATTGAACGAACAAAGCATGTCGATGAGACGCGGAGGCATATGGATGATGG
GGCCAAGAAGCAATCGAGGACGACGATCCATGTGTGTACCTTGAGAGAGCCGGAGCACGC
GCAGGGAGACTCCATTGCCGCGGAGCTCTCGTCCTCCTCCTCGTGGCAGATCCTGCACTG
CATCATGGAGTAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGAGGCCGTCCTGCTGCTG
CATCGGTTCGTCGTTCCTTGCTCCCAATTCAATGGCGGTAATGGCTACCCTTTGCTGGCT
GCGCGGTCGCCTTTCCTCCCCCCTTTCCATTTCTTGTAAGCTGCAAGGGGCGGGGTTTAA
ATAGGCACCAAAAGGCAGAGAGCAAAATCCAAATGCTGTGACGTGCGCCCACCACCTAAT
GCTTACCAACCACTGCTGCCGGGAGAGGAGAAGAGCCCTCCTAGCTCTCTTCCTTTGGTG
AACCAACTGCATGCTATCTATCGGTCTATCGTATGCAATTATGGGAACCTAACTAATTGG
CTGCTGTTAGGCGCGTAATCTTTGGCTTTTAAAATTCCGCTCTCTGTCTGGTGGATGCCA
CCAGCAGCTACCGTTACATTCACACACCGAATTGAGTACACATGCCCTCTCTTTCTTTCT
CTTTGTACGCTAAGATTTTCCTTCTTCCTGGAGGATCTTTGGAAGAGGAATTCCCTTCGT
GGCCTTTCTTTATGGTGTGCTGATATGAAATTTGTTTGAGCCGTCCATTCATGAGAATGG
GATCATAATGTTTGGTTGTCATTTGACTCTTTATTCGTCTAATCTCTGGTGTGTCATCAT
TGGCGTGATTCAAAACCCACCATCTCTTGTATCTATGCCGCGTACCAACTATCTTAACAA
TGTCACTTAGGATAATTGTTCAGTCTTTTTTTTAGTGTGGATAATTGTTTAGTTGGAAAA
AGGAAAAAGGAGGAAAAAAAGGGCTGCCTTTTCTCTTAGCTAAGACTAGGAGTGACCGTA
TATGCGCAATGCATGCTATGTCAGAGAAGATATTAATTGCATTACATGTTAATGTTAGAC
AAGATATAGATTGCACGTTGATATTAGGTAGAATATAATTACCATGGTGTATTATAAAAG
ATATCAATTGTATTGCATAATAATATTAGGAAAGATATTGACTACACGTTGATATTAGGT
AGGATATAATCACATGGTTAGCATTGCGATTAATATTAGCCATGATATTGTTTTCATGCA
AAATATGTTTAGAGCTAAACATCGGAGCAAGATAAACCGTTGGATAGATGCAGTGACGAC
GTCAGGTCGCCCCAGACCGCCAAATGTTATAGTCAACGAACGATTTGGGCCTTACACCCT
AGGCCACGGCCCAAGCTACGTGGAGCCTGTCTTCGTCAGTGGATAGACATGTTTAAACAA
GTGAGATGTGTTTCGATCTCCACAACTTACATTTTTTTTAATTTGTATAGATATAGATAA
AACAATTCTATGTATTATACTAGATGATATATATTTTTGTTCAAAAAGGAGGATTACCTA
CGGTCTATGCATTAACCGACGCACCATCATTTTTATTATATTACTCAATAGAATCCAATA
AAATAAATACATGGACCAACCCAAAGCCACATTCATAAAAACCACAGTTAATATGCCTAC
AAGTTTGATGATGTGTCCTGATTTGACGTGAAATACCATCTAGTTCAATGGACTCACCAA
GCCACCCACCGGCAAGCCAAGAGCACCAACCGATTTAGCAAACCCTCTGCGCGCACCGCA
TGCACAAACTCTAGAATCAACCGTCACCTTCTTACGTCGCCCCACCTTCAGGAGCGATCA
ATGCATTTACCTAGACGGACCATTTGATCGTCGATGCCACCATGACTCCAGCCATCACCA
CCATCATGTGCGCGTCCATCAACACGCGTTTGTTGTTGAGACTGATGTGCCATGCCGCCG
AGACCCGTCGATGTCAGTGCGGTAGATGCAACACTGCTCCTCTTTTTGTTCCCTCCAGCC
AATACCTGCTCCAAAATGATGCTCCCAAAAGGGAGAATGACCCCGAAGGTGCCACCATCA
TTCGATCGAGGAAACCCAGATCTAGGGTTTCGCCCGGAGCAGTTGAAATGAGGTGACAAA
GATTGCAACCGATGATTCCTTCGACAAGGAGACTATGGCCTAGACGTCACCTTCGTCCGC
CATGACCGAGTTGACACAATTTTCACCAACATTCACATCACTCCGAAGTAGCAGCTGTCC
AGATCCGCGTCAAGTCGTGTTGTGACGGCGGAGGCAATCACCAGAACACTAGGAGGGAAC
CAACATCCCTTGTTGACCCCTCTAAGCGTCGTCGATTGGCCCCAGGCCAAACCAACAACA
GATCTTGGCGGGGACCAGATCCAAGGCTAGCGTCGCACCCTTCATTGCCAGATCCACATA
GGCTCACCGACCATAAGGCGATCGTCGTTGCCGCATGGCCAAAGGACGATGCTTTGGCCA
TGCCGTAACTGCACCAGAAGGTCGTCGTCGCGTCCATACACACCAGCCCCTTCTATGTCG
GGCCCACTACCACTATAGCCTAGGCCGACCACACTAGTAGAGAGCCTTTAGCGGCTCTAG
ATTTAGCCCCCCGGCGTCGCCCTAGGGAGGCGGCACGAGGCGGCAACGGTAGATGACATC
TCTTAGCTATCTATTTTTTGGTTTAATTTTAATCATCCATATATTTTTTTGTAATAAATT
ATTCATAATTTTAGAAACATGCAAAAGACATGATTTGTAATGTACCACTAAATGAAGATG
CATCCGTGAGTCCCTCGAATTTGGCTCCTCACATGTTCGTGGACAAGTCCGACCAGTGTT
CGGAAGCCTTCATTTATGCATACATGCAACCATGTCTCTCACTTTATCCTTAATTTATCC
GGTCACATGGATATAATTTGATGGTAGTGACGACGCTGTCATACACAGGATATAAGAAGT
CCGGCTGTATATGTTGTACGATCTCTCGTGTATGAGATTCAAAACCCACCAGCTGTGCAA
TTAGTTGACAAGACATTTGGATATGTTCTACACACCATCAAATGGGCATTTCCTTTTATG
TAAGATAAAAATATTACGGTGATCCAAAGTATATTGACGTTAAACCAATCACCATTTGGT
GGGGCTCCGCGGTTACCTCCCCTCCCCGTTTCCGTTGAGAAAGAGAGCGGACGCAGGCGG
AGCTCCGGATAAAGGCAATGAGAGTTGCTGGGCATGGGGAAAGTAGAAAAACGGGAGGGG
CTCGACGAGCAAAGTTTAATGGAGCTGACGGCAAGTGTGATCCAGCCAGAGCGCGGCGGT
GCGTGGCCACGACGCCAGCATGAAGGAAGCAACTGATTTGAAAACTCCGCGCCTCATGAT
CATATCATATCTAAAGTTATTCCTGGCTCAAGCTGGACCTATATATATACATATATAAAA
TATTAGTAGGTACTGTACTTGTTAAGTGGGATTCTTTCAACTCAATCATCGAAATATATG
TATCATCAATTTTATACTATTTCTGACAATAGCTACGGGCAAAGTTATTACACTTCCATA
ATCACTTGGATCATCTCTAGTAAATCCCCAAAAGTTATATTTGGGGAGTTTTTTTTCGTT
TTTTTTTTTTTTGTTTCAGGGGATTAAGGCCTAGCTAGCTATCCCTCAAACCAATAATCG
CTCAAAAGTATTCCTTTTTCTCCCTTGAAACTTAGGCCCTTTCGGAGTCCCTTCACTCCA
CAACTCCGCTCCAGGAGCAGCCGGAGCGCTAGATTAAAATCACGGAGCCCTGGTTTGCTC
GCTCGGCAGATCCTGAGGTTTTGAGGAGCTGGTGGACTGCCGAACATGGTCTTAGTCCGC
CTAAATTTAGTCCAAAGTCGTAACTTTTGAGTAAATGTAGTCCGTCCTGCAACCCTGCCA
TCCTCTTCCGCACTTTCTCATCGCTTGTTGTCGCTGTAATCCATTTTTTCACCCCCGTTG
TGTAGCTCTGCATGGTGGCCGCCGAGGCCCATTTCCCAGGTAATCAAACCGACCGACCTT
GATGATGCCGTAGGAAGGTCAAGCGCAACTCCTAAACGGCCAAAAACACTAGAACCGATG
AATAAGGCAGTCGTCGTCGCACCGACATCCTAGCCGTGTTCCCCGCCTTCACGCCCTGGA
GTCGTCTCGACGATGGGCTCGGTTGTGTCGATGGTGTTCTTCGTTGCTGTTCAGTTAGCC
CAAGCTCCATCACCGATCGCCGTGTGCCCGAACCCGTCTGTCACAAGCCGTTTGTCAGAT
TGCCTCTATGCAATTTTTTTCATTGAAGAAAGGTCTCAGATAGATCATTATACGCAGTGA
GAGCACATACATCCACATATTGACTTCTGAGAAGGCTGGTGGTCATGAGTCGGTCGTCTC
CCTCCCCGGGTGCGACGACACGGTCCGAGCGGCGATCCTCGTCGCCGGCGCCACCGTCCG
AGCGGGCAGTGACTATCGGGCGCGTGCACGTCTCCTTGCGTGGAGGCCATGTACCGCCCC
GGTCGCTC