| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_138579
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_7063 |
1 |
619 bp |
MLOC_7063.1 |
Available |
Available |
LOC_Os04g39160.1, FRAME:-1, EVALUE:5e-60, 13104.m03783 protein RNA-dependent RNA polymerase, putative, expressed |
| MLOC_7062 |
1 |
1867 bp |
MLOC_7062.1 |
Available |
Available |
LOC_Os03g19280.1, FRAME:+3, EVALUE:0.0, 13103.m02307 protein argininosuccinate lyase, putative, expressed |
CDS Structure of MLOC_7063
CDS Structure of MLOC_7062
Contig Sequence (8002 bp)
>contig_138579 8002 assembly3_WGSMorex_rbca.fasta
GTGTTTGGTTCTAGCCACACCTAAGACAAACATTTTTTAATAAGTACTAAACCCCACATG
TCATAGACACAAAAAGTGTGACAAGATTCCCTTAGGCAAGCCAATGTGTGGCTAACAATT
TAAGCAACTCAAGTAAGGAAGTGTGACAAATATGATAAAAATAATGTGGTAAGATATGAC
AAAGATAGTCACAATCCAAACAGCCCCTTAGTCCCTTATATCCAAGCAACATCCTATCCT
TCGAAAATTCTACTCGTACGACTTTCCTCCATTTCAAACGGGGCCTCCCTTAAAGGTAGA
GGAAGGAAAAGTATGCGTCGTCTGAAGTCTAACCCCTCTCCAGTCTCCCCCCTCCCCCGC
CGCCGCGCCGCCGCGCCACAGCCGCGCGTGCAGCGAACGTCGGCGCCAGTGCCACGCTCA
TGGCCGCCACCTCCCATTCCCTCCTCTCCCCGGCGCCCACATCGCTCCCCCGCGCCCGCA
TCACCTTCCCCGTCGCCCGCGCCGTCGCCCTCCGCCGTCGCCCCTCTTTCCCGGCCGTCG
CGGCGGCGGTCTCTTCGATGGCGTCCTCGGATGGCGAGGAGAAGAAGGAGACCAAGCTGT
GGGGCGGGCGCTTCGAGGAGGGCGTCACCGACGCCGTGGAGCGCTTCACGGAGTCAATCT
CCTACGACTGGCAGCTGTACAAGTACGATATCATGGGCAGCAAGGCCCACGCGTCCATGC
TCGCCGCCCAGGTACCTTTACGCGCGCGCTCCATCAAATCACCTGTTCTGGTCGGTACCT
AGGTGTTGGACTAGTTAGTTCCCTGCTTTCGACGAGTCTGCGGCGACAGCTTGATGTTAT
GCTCGCAGTGTGTTTGACGAAATTGATAGCTTCGTTCTGCTGCATTTCATGTGATCTGTA
GCTGTTCGAAATTGCTTGCTTGGTTTGAAGCGTCACATTGAAGGATTGAGGGTTTAATCT
TTCAGTCATTAGGGGTTTGGGTTTGCTTAGCACGTCCAAATACTTAATGGAAGCACCTCC
CTCTAGCTTGCTGTAGATGTTAACTGAACTAATGGTCACCTTAGCGTGGATGTACTGAAT
CATTTGCAATGCAGGGTTTGATAACCACCGGTGATAGGGATATTATCTTGGAGGGCCTAG
ATCAAATCGAGAAGCAGATTCAAGATGGCAAGTTTGAGTGGAGAAAGGATAGGGAGGACG
TGCACATGAACATCGAGGCAGCTCTGATTGAGAAAGTTGGTGAGCCGGCCAAGAAGTTAC
ACACTGCTAGGAGCCGCAACGACCAAATTGTGACGGATCTTAGGTTGTGGTGCCGCGATG
CTATTGACAAGATTTTGATTCGCATCAAACAGTTTCAGGTTTGTTCTTTAGTTCTCTTTG
TGACACTCATGGTGTGCTGCTTATAACTTGTCTAAACTCCTTGTATACAACTTGTTTTCT
GGTGTCGCATTCATCAGATTTATGCTCTTTGTAGACATCATGAGACATTGCGGATTCATT
ATTCAGTGTCATGGTCTATGTTAGATCCATAGCTATTTATTATTATTTGCGCCCGGTACA
CCACCTTGACAAGTAGGGAAGCTAACTGAACTGTGAAGCTATTCCTACTGATTTTCCTAG
TAATGCTCAACTATGGGCAGCAACTTCCAAAGAGAATTTCTCCACTCTCTCAAGGGGGAG
AAATGGAGATCTACTTGGTTTCATGCATTTGGTATCTGTACCTTGTCCATACTGCTTAAG
CTTTGCCAGTAATAGAAGGCAGTTTGTTGTTATGCAGAAATGAATTATGTATAACTAAGA
ACATCAATGGGTTGCTGTATTTGGTCTAATTTATATCATATGTTCACATATTTTAATAAT
TGGTAACATTGTAAGTTATCCCGCTTTGCTGACATAACACTTGATTTCGCCTTTTCTGAT
AACCCTTCATGGTGTCTATGTATTTTTTTTAACACAAGCATAATTCTATTGTTTCAGGTG
TCTCTGGTTTTGTTAGCTTCAAAATATGTTGACTTAATTGTCCCCGGTTATACCCATCTT
CAAAGGGCACAACCTGTTTTGCTGCCACATCTTCTCTTATCATATGTTGAACAGGTACAC
CCATCCTCTTTTAATGCACCATTTCTTTTTAGTGCCTTGATGACTAATTTTCTAACTGTC
CTGTAAACGAACCCCTAACCCTCCTCTCTACACTGTAATAATCATATTTATCCACTCTAT
TTAACCACTTCTAGTGTGAAAATTGTTTCAGACTGTTTGCCACATTAGCTCTATTTTTCC
CACTACAAAAATGGGAATAAACAGGACCTGTTGTGCCAAAAAAATGGATTATCCTCTAAG
CATAACAAGTCATTTTTTTGGGTGAAATTTCAGTTTAGGTGGGTCTTAAGACTGAACTAG
GTTCTGCCCTAGAGTGAACCATATGACTGGAAATGAATCTGATGTTATTTTCACTTGTGC
TGTGCACAGTTGGAGCGTGATGCTGGCCGGCTGCTCGACTGCAGGGAAAGAGTGAATTTC
TGCCCTCTCGGTGCTTGTGCTTTGGCTGGAACTGGACTCCCCATTGATAGGTTCAAAACC
GCTAAAGATTTGAAGTTTACAGCTCCGATGAAGAACAGGTAACCAATATCCTTGATTTCA
TTAGTCGTGTGAAACTGTGAACATGTAAAGTACATAGTATGCTTTCTCTGCTATATCTTG
TTGAATTGTAACCAAGATAAAGTTAGTTTATTAAATTGCATACCTTAGCATCCTTAAATA
TTTAACATCTTGTAAAATGAGTCTCTGCCTTACATGAAAGCGCACATGTACCCTATTAAA
TATATTTTTGGGAGCATATTGATCTTACCAAAGTAAAGCTGATAAAGCCTCATTTGTTTT
GGAGGATTCCTACCGGATTCCCCCTCTCCTCCTCCTCTCCTCCATATTGATCTCATTCTT
AGGATTCTTACCATTAGGTGAGGCCTCATGGAAAATTCCTCAAAGACCTCCTTCGGGTTC
TTAGCATTAGGTGAGACCTCATTGAAAATCCTTAAGGATTGGAGTGGGCAGGGCATCCTA
TTCCTTTTTTTTCTATTCCTCTGATTTGAAAATCCTTGAAACTGAATGAGCCCTAAAAAT
ATTAGGCCTGAATACCTTATCATTTTGTGGCTATCTAGTAAAGAGGTGAAATATGACACA
GAGGACAAATATCCTATTTTAATTTGCTTGTTCATACTTGATTTACACAATTAGTTATTC
AGACAACGACCACCATTTCAAGTTTTAGTGCTGGAATATTACTGTGCAATTGAAATTATA
TGCTTAACTCTTATAGACTAAGCGATGCAAATAATTGAACTTCACTATATGCTTTCTCTC
TCTGAATTTCCTCCTTTTAGGTTAACCACACCTTTTGATATTTGTTTCGGTATTTGATTG
TTATTTTTCTACAGTATTGATGCAGTGTCAGATCGTGACTTTGTTTTGGAGTTTCTTGCT
GCCAACTCTATTGCTGCTATTCATCTTTCCCGCATTGGCGAAGAGTGGGTCTTGTGGGCA
TCAGAGGAGTTCGGATTCTTGACACCAAGTGACAAGGTTTCAACTGGAAGCAGCATTATG
CCACAGAAGAAAAATCCAGATCCGATGGAGCTTGTCCGTGGAAAATCTGCTAGGGTTGTT
GGTGATCTCATGACTGTCCTAGTCCTCTGCAAAGGCCTTCCACAGGCCTACAACCGTGAC
CTACAGGTGCGCCTTATTCTTGGTACTTTTATTATCCAGGCTTGGTTTCTTGTGCATGTT
CTGAAAATTCTTTTTCGAGCAGGAAGACAAGGAACCCTTGTTTGACAGTGTGAAGGCCAT
ACTAGGAATGCTTGAAGTATGTAGCGAGTTTGCTCAAAACATCTCTTTTAACTCGAAAAG
AATACAAAGCTCGCTGCCTGCCGGTTATCTGGATGCAACAACACTGGCAGATTATCTTGT
GAAGAAGGTAAACACTACTCTATTTGGTCTGTATTTGAACTAAAACCACTACACTTATTT
TGGATCGGAGGGAGTAACTAAATTAATCCACAGCATCATAAATAATAATTGCATGAGTCG
TACATTAACACTTCTTTTATTTTATTTCTGCTGTGTTATTTACTTGACTAGGATGGTTAC
TCTGGTTGAGTGGTTTCTATGTTTCTGTTCTGCAGGGGGTTCCATTCAGAACTTCTCACG
AGATAGTTGGAAGGTGCGTGGCCTTATGCGTGTCGAAGAACTGCCAGCTGACAGAGCTTG
AAATGCACGACTTGAAAGCGGTTCACCCTGTCTTCGAGGCCGATGTGTACGCCTATTTGG
GTGTGGAAAACGCCGTCAACAAGTTCATATCTTACGGTTCTACGGGTTCAGAACAGGTAA
AGAAACAGCTTGAAGATTGGCGCCTTCAGCTTGGGATCAACCCATAAGGCGCAGCATCAA
CAGAGGAATAAATCCCCCCAAGTCTAGTGTGGCTGTTGCTTATTTTGGGAGGTGGGTTGT
AGTCTGTAAACCAGAGACGTTTTATGAACGTGGTTCCTGTAAACTATTGTGGCTGTTGCT
TCATTTGAGAGTTGGAGTGATCCGTGCAACGTTTTATTTGTAAGGCACATGCAATTTTAC
TGAAATGGCTGTGTTTGATCTCCATGACGAATCCAAAAGGATGCCCGTTAGTTTACAGAG
GGAGTATCCATGTTTATGCCCAAACAGGTCACTGGTTCTTTTTAGTTTTTAAACATCACC
ATATTATGACCAGATAGTATTGGCATACACCAGAAGAGAACTGCACACAAAGCTGAAGCT
TTGTTGAGATAGTGATGGAGCATGATTGACGATGCTACCTACCATGCCTTGCATTGTGAG
TTCAACCTCCCTCAAAACACGATCAAGCACGGTTCATTTACACTACACAATGGACCAGGG
AGCGAGGCAGACACAGCTTTGCCGCTCAGCTCGGCTCACAATGGTCTGCAGTCTGCACCG
CAGTCATGCCCCAGAGTTTTACACTGCATACGGACTACTCCCTCCGTTCCTAAATATAAG
TCTTTTAAAAGTTTTCATTAGAAAACTACATACGGATGTATATAAACATATATTAAAGTG
TAGATTCACTTATTTTGTTTCGTATGTAGTCTTGGAATTTGTAAAAAGACTTATATTTAG
GAACGGAGGGAGTACAATGCTAGCAGCGGTGCAATGATCAGACAGCTTGCCCTGTGACGC
ACGCGCGCCGGACGATTCAGGCCGCCGCGTCGTCCACCTGCTGCATGCGCCGCTTATTGG
ACTCCTTTGATCTTCAGCAGCAGCTCGTCGCAGACGATCCACGGGAAGCTCCAGAACGGC
TTCTTTCCCGGCCGGCGGTGGTCCGCGTGATAGGTCACGCGGTACCACGCCAAGGCCCTC
CTCGCCGCCTCCGCCTTCGGGCAGCTCGTGAACCAACCCCGCACCTCCTTGTGCAGACCC
TCGACAGAGTCGATGATGCGGTCCTTCATCTCGAAGTACCTCATGTTGCCCTTCTTCAGG
TACAGGAGCCTGTTCCGGATGTTGCCAGTCAGGATCTCGTCCTCGTGCTCCGTGCCGTAG
CAGCCCATCAGGGTGCTCAGCTTCTCCGCGTACGGGTCGTAGCACTCCTCCGCGGATGCC
AGGAATTCCTCCAAGCCAGGGACCTCCAGGTCGGGATCGAACTCGGGGCTCGGTTGAGCC
GAGGACGACGGGGCAGGAGAGCTCTGCATACGGCTCGCAGCCGGTCGGTACAGCTTGCCG
AGAGCTCCGTTGGAGATGTACGTTGGTTTGTCCCACCGTTCCATGAGGTCGGGGTACCCC
TTTTCTTTAAAACAACGTAAATCCATTACTCAACGAGCGCATCAAGCTGGCTAGATAACA
GTGTATAAAATCAGAACGGCGCTGCTATACTTACGACGTTTCTGGTACCATAAACGTCCG
ACGCTACGTGGCAGCTACTTACGATGCGCGGGGCAACGAAAGCGGAACTGCATCGTCACA
TGCTGGGCTTGGGTTCGGGCCGGGGCTGGATCAGAGTGCATCTCCAATTCTGGTAGGCCC
CACCTCTTAAAAAGTAATTTCTTTTTTTCTTTTTTCAACTAGCACGCTGCCTTATCCCCT
TGCTGGTTTGGACGAAGTGTTCTAGCTGCTACCAAGTGTTACCTTGCCATCTCATGTAAT
ATCACTGTGTAAGAATATTTCAGCAAGCAAAAGTGAGATCCATGAGAGAAGCAAAATTGA
GATACAAGCGATGGCAGCTTCATAAAAATGTCGTACGTTTATCGTACGACAAACGTCGTA
CGTGAAGCAATTTCGAAATCAAAAGTATGCCCCGGCCAAACTATTTGGGGAACGTCCTTG
AGCATTGCACCAAATGCGGCGAGGCCGTCCGCAACTCTATTACAGGTTCTAGGACAGAAA
CTGATATTGAAGCAGGAGAAATTTAGAAAAATAGACACCTTTACTTCCTTGATCAATACT
CCGCACTGCCCCATCTCATTGTCTTCATTGTTTAGCGCCTGAATCAGTAGTTGCGACTCA
GACTCAATCTGAATTCTTGACATGCCCCATTCCTGAATCAGGTGTAAAGCTCTGCTATAT
GCCTCAACTTCCGTATGAAGTGTACCTTGAGCGTGGTCCAGACGACCAGCTGCCGCCCCC
ACAGCCGCGCCATTGGAGTTTCTCATCACGAAGCCCCAACCACCGCTTCGAGACATATAA
TTAAAGCAGCCATCAGTGTAGGGATACTCCTTTGGTCTCGGTGACCGGGGCATTTCAACT
GGAACTCCTGACTTAGCGAAGTCAACCGCCATCAAATGCAAAGTAGCTAGCTGGAGGCAC
TCAGGGCTTCGGGCTTTCATTGGATGACGATACGCGCCAAGTAAGCAGTTGAGATTGCAC
CGAGCGAGTCATTTATCATGTAATCTACAAAGTACTTCTGAATTTCCTGTAGTTCATTAG
ATGTTTCTTAAGCTTCCACGTATAAACATGTCAGGTGAGGAAAATTATTTCTTGTCGAGA
AAAGAACTCTGAACTGCTTATTGGAGCCAGCCAACTGGTAAATTGTTGTGAACCTACCAA
GGTTAGAGATATACTGCATTGAAGAGCATTTTAAAACCAAGACCACTTTAAAACTCAATC
ATGGGCAATTGTTTTCATTAGAGGACGGCAAAAATGCCCTTCTTTCCGAAATAAGTACGT
GCTTTTCTACAGTGTTGGAAATATGAATAATTTATCATGTGATTTTACTAGCAGAAATAG
TAGATAAATCATGATTACCATAACAATTATAAAACAAGTCATGCAATCATAAAAATAGTA
TGCAAGTAGCATCTGAAGTGATGAGTAGGAATGAAACATATCTAGAACTGAAACTAGAAC
AAGAAGTTGCGGCAGAAACTCAAACAAGAAGTACACGAACACGTACTGAGTTGTCAACAA
CAGCAGTGGGATTGGCGTTGACATCGTCACCGGCCATGTTGTCGAAGAGGTTGTTGATGT
CGGGGAAGAAGTCGTTGCCTCGTAAATGGTCGTCTGCGTGTGTGGCGTCCGTGATGAAGA
AGCCAGTAGTCGCATAGAGCGCTCCTCAAAAACCTTATCACCCTTATCCCGTAAAGGACC
CAAAGTGACGGGGTTTCGAAGGCCTACTGTCCCGACCTGGGATGCACGCCGCAAACCCGG
ATGAAGAACCTAGCAGTAGGTCAGATATTGGAACTTGATGACGAGAGGAAGATGATGTTC
CGATGTGTCTCTCTCTCGAGAGCGACCTCTCTTTTATAGGCACATGAGAAGGAGGCGAAT
ATGCAGCGACGGGAGGCGAAGCAAAAAAGGGAGACAAAACGAACAAGGAGCACTCGAATG
GTGCAACATGCATATTCAATCTCCATTACAGCAAAACCTTTCAGCTCCCAAGTGACCTTT
TGTATACCAATCGTGCATGACAAAAATTTAGACATCGGCTCGGCTCATTCCCTCTACCCG
CGACACGTTGTGGCGAGGCGGG
