Contig Data
morexGenes
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Map Locations of contig_138511 (5361 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138511

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7019 10 2795 bp MLOC_7019.5 Available Available LOC_Os06g50890.1, FRAME:-3, EVALUE:5e-83, 13106.m05473 protein RNA recognition motif containing protein, expressed





CDS Structure of MLOC_7019






Contig Sequence (5361 bp)

>contig_138511 5361 assembly3_WGSMorex_rbca.fasta
ACTAACCACATAGAGAGAGGCAGAGACGAGCCGGCTGCTCCCCTCTTTCTCCTCCCAACA
TAGCTCCAGTAGCAAACCTGTAATCCATTCATACACATCAAACACTCCGGCAAAACTATG
GGTCTTATCTCTACGGAGAGCCTTGAATCTGGATACATCGTGCGTTCCATACTTGTACCA
ACCTCGTTCCGAGCATCCTCCTTTGTCGTTCCCAGCGTCCTCCTTTGTCCATTCGGTTCT
CACCGACTTTAGCCTACCTATGACATATGTTTGTCATATGTTGTGAGTATTCACCTACAA
CGCATTCTCACACGCTACCAGCACCAGACATTCATCAAACTTAGCACCATGCTGCCGGGA
ATTCACACATTCATCAAACTTAGCACCATGCTGCCGGGAATTCACGATGGATATTCAGGC
CATGAAGCAGAGCAACATGATTTTGAATAGTTAAAAGGATGAATCCAAATAGAACGAACA
TGTCTCATGGTCAAGTTAAAAACTAGGTGGAAGTACAACATTCGCATAATCCACGAATAT
ATCGTTCCAAGACAGTACAGTACACCTTATACATAATCTAGCATATAATGGGAGGCCATG
ACAGTACAGCTTACACATAATCTAACATAAGGGGAGGCCCGTCACGCGCAGCATGTTATC
CAACTTGACACAGGGCCTCTGCTGACGCAAAGAAACAACCACCCTTTACCTGTCATAGCC
ACCACCACCGGCACGGCGGCCATAGCCCCTTTCAGGCATCCGGTATGGGGAATACGGCAA
CGACCTAGACCGCTCCCTCCTTGCTCTGCCACCATAAGGAGGGGGAGACCTGTGGGGGGA
GTAGCCCCGGCCACCCCTGCCATCATAGTAGTCTCGGGCATCCCTATGGGGTGGGGAGTA
GTCGCGGGTGTCCCTGTAGGGAGGGTAGTCCCGGGTGTCCCTGTAGTCTCGGTACATGGG
AGGCGGAGACCTGCGATAGCTGTTGCCGTAATAATCGTCACGACCACCATAGCCTCCTCG
GCGGAATCTACCACCACGCTGCATCTCTCTACGCTCATAGCGGTGGCCTGACCAAGGAAA
ATTGCAAGTAAACCATAAGCTGTAATTAACCAAGCATATGCACATCATATGTACATACAG
TAAGAACATGCAGAAATAGAAAAGAGCACTGAGATACGATACAAACAATTAGCAAAGATT
AAAGAGCTAGACCACAAGCTTCAGCTGCTTTTAATACCTAGGTAGCTTCCAGGAGTTGGT
GTCCTAGGGCGGCCTCTGCGTGACTGAAATAATTGAAACAACAATCAGTACAATATCAGG
TTGAAAGCTAAGATAGGAAAATAGAAGTATCATGCTGGATTGTGTAGGAAATTATGAGTT
TCCCTTACGGCGGATATACACCCTGCATTAAGGGACCAAGGAGGAAATACTTAATGAAGA
GCACAAACTCCAACTAGCAGACATCCAACATTGCTATGCATATGTCACCAGACATCTTGA
CTAAAGTGTTGGAAATGCCCGTTGATTAGTTGATGGGGAGTTGAAGGTGAATGCTCAGGT
TTAGTTGAAAATTTGCTACGTTTAGTTGTTGTGAATCTCGTGTTCCATAGTAACCCTTTG
GGCTGTCCATTGATCAAGCTGTATGAGCTAAAGTTGAAATTGATGAACTCAGCATCTTGA
TTGCTGGCACATAGCTTGCACAATGCACAATGTCTTCTGAATAACCACCAAAAAACCTCC
AGGTCAACACACATGAATAACAAGGATCGATACATCTGAACCAACAAGACGACAACCCAT
GTGGATGCGCAAACAATTACCTTTTCAACTGTGATGTTTCTGCCTAGCAGTTCTGACTGG
TTAAGGTACTTGATGCAGCGTTCAGCATCTTCAACAGTGTCCATGGTGATGAAAGCAAAT
CCACGAGAAACACGTGTATGGGGTTCAAGAACAACATGACAAGAAACCACCTGACAAAGA
GGGGATGTCACAACTTTGTACATCAAAGGAACAACAAATCTGCAAACATACACGAAGCCA
AGTAACTAACCTTTCCTTCCTTATTGAAGTACTCTCTAAGTTCTTTATCAGTCACCCTAG
AAGAAAGTCCAGTGATGTACAGAGTATTTCCATGATTAACAGCTTCAGGCTCCCGTTCCC
TGGAGAATGAAAAAGATTAAGCATGTACAAATAACATATGATGAGCATGTACAAATAACA
TATGATGAATTACTGCTTCTGATGTTTCAAGTGAAATGTTAAAGTGTTGGTCGTTCAACT
CAGTATTTTGAAGCATATGCCCCATTCAAGAAAATCTGTAAAAATATCTTGTGTTCCCTT
TATCTTAAGCGTTTCAGAAAGTTTATACATTACCACACCATAAACTACTTCGTTTTCCAT
GGACAGAATTCCACTTTCCCATCAAAGGAGCAATTACAATCTTAGATTGCATTTCTTACA
CAGATATTATAATATGAGTATATGACGCCTAACTATGACAACTATTGTGTACAACTAATA
GCAAGTGATTCAACTAAACACACAATATAAGCTATTATAATAGGATGACCAAATTTTATA
ACCATTTTATACATACTTTCATCCTACAAAACATTATATGGAATTTATGGCACGAGTGTA
CAAGCTATTAACATAAATTTAGCTATTATGAACACAACTCTCAACAGCACAAACATGTTG
TACATGATATTGCAAGAATACATGTTAATCTTTCATTTAGTTTTAGATGTAAGAAACAGA
ATACGAAGAGCATATGGAGTAGATGCAGTATTAGCAAAAAAAAAAACGTGGAACAAAGAG
TCCACACCTCGCAGGGCTTCGAGATCTTGACCTTGCCTGAGATCTAGGATCAGGTGATGG
AGATCTAGACTGGGATTGGGCTACAGGTGATCTTGACCTTGACATTTGCTTTTGGCGTCC
CTTATAAGGTGACGGGGACCTTGAGGGCCTCGTGTACCTGGAAGAAATTATCACTAGACT
GTTAACTAATTATAATGAAGATATTTTCTTCCCTGACATTTGCTTATAGAATGTGCATGA
TGATTGGCCAAAGAGAACATAGCACACAGGATAGATAGCAGAGCACAGCCATAACCTTGG
TGTAACTTTACAAGTTTATTAAAGATAACAATATGAACTGCTTATAAAATGGTCCTCGGG
AATCAAACATTATTTTCAGTGTCCAATGAACTCGCTTGCCTAATGAAACACTGAGCGAAC
AAAATAAAGATAACCTGTTCATCCATCAGCATCAGCATCACGTAAATCCTCTTAGTTCTT
GTAGCCTCTATAGGACAGATCTAGTCAACCTAGATTTGAAACAAACTAGCACAGGAGCAT
GGGTGTGTGTGTACATCCCCACCTCCCCAGCTGAGCTGGCTTCAGATCTGGACCCTCAAT
CAGACACTCACACACCGTTATACCCAGGTTTATTAGCAGCCACTTAAACTCTGAAGCTCC
CTATCGGAAAACCTATAGTAGGCTAATACCATGGTGTTATCACAAACTTGCACTATCTGG
AGCTATACCAGATGTCAGGTGGGCGAAACAGTGCATCCACATGTACAAGCAAATCAGGGG
CTCTAACAAAGAGTAAAACCGCACGAGCTCCGTAAACCAACTAAGACGCAGAGACGGCAG
CAAGCCTACTCTCACCAAGTAGAGCCTGCAACCCAGCTGAGGGTGAGAGGCAGATAGCTA
GATCCGCGGCTATCTCATACTACGCAACACGCATCTAGTCAGTCAGGCAGCCAATCTCAC
AAACTAGTAAGTAGTAGAATCGAGCCCGAAAAGAAGAGGCGGACAACGGGATCCGCATCC
TCTGATTCCCCGTGTCGCCCTGCGCCTACCAGCATCCAGAAATCAAGTAACCCCCTGCTA
AACCGAAGCTAGGTCATGGCGGCATCACAACCTGGCCCGGATCAGAGCGGGCGGGCGGGA
GACCGACGAACGGGAACGTATTCAAACCAGGCACCGAATCAGAGAGAGGGGGAGGGGGAG
GAAGGGCGTCGAAGAGAGCGAAAGCGCGTCCGAGGAGGCATGCGCCGCCATTTACCTCCG
GCGCGGGGAGTCGGCCTGCGAAGGAAAGAGGAGCAGCCGTCAGCACGGAGATCGACCGCA
ACGGGGGCCTCGGGAACGACAGCGGCGGGGAGGAGGGGAGGGGCTCACCATGGCGCGGGT
CGGGGCGGTGACGACGGCTGCGACGGAGTCGTCGGCGACGGCGGGGCTTCCGGCGGCCGC
GGCGGAGGGGAGGGGAGGGGCTAGCTAGGGTTCGGCGGCGGCTCGTCTCGCTCGCTCCTG
GCCTGGGTGCGCGATGTGGTTGGGTTGGCTTGACCGTGCTCGAGCCGGAATGGGTTTCGT
ATCATCTTGTTGTGTGGTGGGGTGTCGGGCCGGGGTGGGAGGAGCCCCCGAGGCCCAACG
GCCCAACAGGTGCTGGGCCCAGCACCATCAGGCAACAGACCTGCTCTCTGGGAAAAAAAA
CATGCTGTCGGGAAAATAAACAGAGCTGCTCTCGGGGGAAAAGGGGAGAAGGAAGCAGCA
GTGGCAGCCGCGGAGGACTAAAGTGTTTTCTTGGCAGCAATTACCTAGTGAGTGACTACT
GCATATTACTACATTTTGGGCAGTAACAGACGCTCCCGTTTTCTGGATTTTCTTGAAGGA
AAATGTTTTCTTGGTTAAAATTAGGAATCTCTACTATTAAAGCAGGATGTNNNNTCGTGA
TGGTTCAACCTCCGCGATGGTTCGACCTCCCATCGATCGATCCCACCTCTCGGTCCCACC
TCGCAAGAAAGAAAGAAAAACATCGTACGATCCACCTCCCACGTCTCCCCTCTCCTTCCT
TCCCCTGACACAATCGCAGCATCGGCGGCTGCGGCGGAACCTCGCGGCGATCACTGGACT
CACCCCGGCAGGTACCGTGCTCTCCTGCCTCCCCTCCTGCATCCACGTGCTCGCGAGAGC
GTTCGTTCCTACGTGTACGCGAGCTTGCGCGGGCCTTCGCCAGAAACCCTAGGTCTGCGG
TGCGGGCCTAGATCCCCGGCGTATCCGGCGGGTTCCTCCCGTGGCAAGCCCTTAACGTCC
GCCGCGGTCCTCAGTTTTGGCTCCTCAAGGTCTCACCGAATCTTGCATTAGCGAGAGGCT
CGCCACGCTGTTCACGAGTCATCACGCTGAGGAATCAGCCATGCTAGACGTGGCAACGGG
TTGGTTGGTGGATGCTGCATTGTCTGGAAGTTTGATTCTTGGGATTGGAAATCATAGAAA
AGTTTCCTATGCGCTAGCTTGCCTGCAAGTCCACGGGAAACTTTCAACCTCTTGCAGATT
TTGCTTTGTCTTAATCAAGAA