morexGenes - Barley RNA-seq Database

Contig contig_138502
Source Contig contig_138502
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_138502 (7268 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_138502

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7012	5	3307 bp	MLOC_7012.1	Available	Available	LOC_Os08g02996.1, FRAME:-1, EVALUE:0.0, 13108.m00246 protein receptor-like kinase, putative, expressed
MLOC_70229	5	2203 bp	MLOC_70229.2	Available	Available	LOC_Os10g38980.3, FRAME:+3, EVALUE:0.0, 13110.m03554 protein expressed protein
CDS Structure of MLOC_7012

CDS Structure of MLOC_70229

Contig Sequence (7268 bp)

>contig_138502 7268 assembly3_WGSMorex_rbca.fasta
TCCCCTCCTCCCGCCCCTTCCTCCCCCGTCGCCATCACAGTGCGTGCCCAGGCAAAGCCT
GGCTGGCGCCGGCGGTGGCGGGCCTACTCGTCCCCTCGCGTGTGGCGCCGGTGCGGGTCG
TTTCCACGGGCCAGGGCGCCGCAATTGATGGGTCACGACGGTTCAGCGGGTCCCTTCCAT
CGACAGCGATTGATGGCATTCGTGGCGTGTCGGTCTACTTGCTAGTGGGCGTGCCTGCTG
CTGTCTGCGCCAGATCTGGCGCTGGAAGCTGTGGGCGGCACGGGGCCGGCGGCCGCTGCG
GGTCCGGGACGACGGTGGCGGACGACCATGGTGGTCCGGCGATGCTTGGTGGCGTACGAC
GACTCTTAGGGGGTCGTCTGCGGCTGCTCGGGCGTGGGCCTCCCATCGCCTTTGGCGACT
GTCCATGATCGGATCCATGGGGCTCGGGCCCGAATCTATGGGATGCAGGTGGCTGCAGGG
CGGTGGAGGTGGTGCGGCGTGGCTGGGGTGCCGTGTGCGCGCGCGGGGTTGCGTTGGGGC
GGCACGGACTCTCGCCCTGTGCAGATGTGGTGCGCGAGGTGCGCGGCTGATCTACGGCCC
GGGCCGACGGCTGTGGGGGGTGGCACGGCCTCGCCGGTGGCCTGCCTTTTTTGGCGGTGC
CTCCGGTCTTAACAGCGGCGTGGCTCAACAGTGGGGGGTTGCGCGGGTGATGCTTCTGGT
GAAAGCCATGTGCTGATTTCGGTCAGCACCGGCGACAACGTGGCCTTCTGGCGTCGGATC
CCTCCTTGGAGGTGTCGTTGTGTGATGCATTGGTTTCACGCCTATTCTGTTCATTCTCTA
GGCGAAAGCCTTCGATTCAGCTTCTGGATCGGACGACCGCGTCGTCTTTGACATCGTTTT
ACCATAGTGATGGCGCTGCTTGCCTGAGGTTCGGGATGGTGGTTGGCTAGTCTGAGATGG
GTGGTCGTTGGTGGTGGTGCGGCCGGTCTAGGGTTGACGGTGGTGTGTGTCGTGCTCGAG
TGCTCCTGGTGCGTCTCTGCTCGGCGGTCCCTGCGGCTACTGCGGCTACTCTGTTGGCAC
ACACGTATCGTGGCGTCGTCTCGGGCTCGCATTACCGTTTGAATGCACCCCCGACACAGA
TTGTGTTGCGGCGTTGTGCGATCTTGGTTTGTGAGGTGCCGTTGGATTGTGTCGACGATG
CAGTGCTACAGCTTATTTTGCTTGGCGATGCCTCTGACTATGTCGTTGGCACACATGTGT
CATGGCGTCGTCTCGGCCTTGCGAGGCCTTCGACTGTGCCTTGCAATGCAGGTCACGTGT
CGCGGCGTTGTGCAGTCTTGACTTGTGAGGTGTTGTTGGATTGCATCGACGGTGAAGTGT
CGTGGTTCGGTCCGGCTGGCCAATGTTGCATGTCTTCTCCTACGGTGCTGTCGCGAGGGT
GAACATTCAAAACAAAGATGGAAAAGGGACGGAAATAAGTTTGCCGGATTCTCGTCAGAG
TATGTCACTCGAAAGTTGGTGGGGTTGCGGGGTGGTCGCTGGAGCAAGGAAAACGGCAGG
GACGACGTTGCCGTGGAGGCGGTCAAGCAAGAGAGAGAGGTGGCCGCGCGAGGAGGGAAC
CTGCCGAGAACTCCTTTCAGCCGCTCAAAATTAAGAGTCGGCGGAGGGCTAAAATTTTGA
GCAGCTCAAGCAAATAGGAGTATTCGGCTACAGAGGCTCTAACGCTGTTCCGTGCCTGCA
AGGAGCAGCGCAAGTTGTGAAGGTAACGCACATCGTCGTTTATGATAGATACAACTCAAG
AAGTCATGAGCATTTGATGTGAGCGCATCTATGATCGTGCTGGACATCTCAGTTCGGTAC
GAAGCCCCAACGGAAAGTCATTTCAGTTCAGACCTCGACGTGGACCTGCCGGTGCTCATG
CCCTTGGTGTCACCATTGGCGCTGGCCCCGTGTAGCCGCTCGTCGTTGACGACCGCGTCA
CGGTGGACGCCGACAACCCTGAAGACGACGACTGCCCGTCCCACGGGGCCATCGGGGGAG
CGTACGTGGGCACGGGCATCTTGGCCGGCAGCATGGGCGGCTGTTTGGCATCCTTGGACT
GCAGCGTGGCCATAGCCGTCCTGATGGACGGCCGCGCGCTCGGGTCCGGGTGCGCGCACC
AGAGCCCGACAGCCATCACACGCTCCACCTCCGCTTCGTCGTAGTGGCCGTTCAGCCGCT
CGTCGACCGCCTCAAGAACGCCTCCCTGGCCGTACAGGTTCCAGACCCATTCGGTCAGCC
GGGAGACGCCCTGCTTGTTAGCGGATGTGCTCATCGGCCTCTTCCCGCATGCCACCTCCA
GCAGGACCACGCCGAAGCTGTACACGTCCGACTCAGAGCTTGCGCGGCCGGTGATCAGGC
ACTGGGGGTCCATGTAGCCCGGCGTACCGGAAACTATGGTCATCGTCTGCATCCCGACGG
AGTGGTCGATGAGCCTCGCGAGCCCGAAGTCGCCTAGCTTGGCGCAGAAGGACTCATCCA
GCATCACGTTGCTGGGCTTGATGTCCCGGTGCACCACGCATTGCTCCCATTCCTCATGGA
GGTAGAGCAGCGCAGAGCCAAGCTCGAGGACTATCTTCATCCTGTTGCAATGGACATCCG
TTCATGAGCTCCAAGAGATGCCAAATTCACGTTAAGATGAACACCGTGCAACTAAGACGT
TACCTCATCGCCCATGTCAAGAAGGTGCCCTTGCCGTGGAGATGGATGTCGAGGCTACGG
TTGGGCATGAGCTCGTAAACCAGCAGGAGCTCATCATGGTTGTGGCACCAGCCGACAAGC
TGCACCAGATTCCGGTGGCGCAGCCGGCTGATCACGTTGATCTCCGACATGTACTCCTTC
CTCCCTTGCATGGATGACTCCTTGGAGAATCGCTTTATGGCCACGTCGAGGCCAAGCTCT
CTCAGGTGGCCTCTGTACACCGCACCGAAGCCACCTTGCCCGAGCTTCTCCTCCGCTGCA
AAGTTCCTTGTCGCGTTGGTGAGTTGCCGATACGGGAACCTCCTTGCCCCCGTCCCGAAC
TCCATCTCCATGATCATCTCGTCTTCCGAGTCCATTTCCTCCTTTGCCTCCCTCTTCTTC
TTGTTATGACGACGACGTAGCAAGATGGCTGACATGGAGAAGAACACCACCAGGAACAGC
GATGCCCCAGCAACGGCTCCCGCTACGACTCCGGAACTGGAAGTTCTCGAGGAGGGTGGT
GGTAGTACCGGCGGCGCTACTACTGTTGCTGTCTTGCCCTGCAACGATGAGTTGAAGTGC
CAAGAAAGCAATTGATGCAGCTCAAAGGATTTGCCCGTCGACGCCGAGAAGCCAACGGCA
ACCAGCTCCGGCAATGCGCTCTTGAGATCAACCTTGGAGCTAAGGCTGTAACTCGGGCCA
TGGTCATCACCAAGCCATAGTGTCACAGACATGATACTTGAAATGTTGTCATACTGGATT
GCGGCAGTCATGTTTCCAATGAGGCTGAAGTTCGGCAAGGGCAATGTTTTCACCGATTTT
AACGAGTTGATGTTGATGCCAACGTGGTGTTGGGATCTGATACCTCGGTCTCATTGGAGG
TGTCGAATTCCACCGCCACGAACCGGTTGTCACCGGGCGCCATAGTGCCATCTTTTTGGT
TCGTGAGACCGAGGTTGTAGTAACCTGCTGACCCAGTCGGTAAGCTCGACGGGTAGCTGG
CAAGGAAGAAAGCCATGCCAGCCCCCCTGGTGCTGTTGAACTTGGGCTTGATGATGAAGG
AGAAAGTGGTGGTGAAGCTGGCCACCTCCCCTGTGTGCCCATCCCAGAGCAACATTGGCT
GGGCATTGTATGATGCCCGCCCCTGGCTCTTACGGACATCCCAGTTGTTGGCGCTAATGT
CGATGTGCCCGACACTGAAGGAAGCGTTGCCTTCTATCCTGATGGCCTTCTGGTCATCCG
AGCCAAAAGTCGGGTAGTCGAAGGACAAGGACACAGCAAGAGGAGGCAGGAAGCAAGCGA
AGGAGAAGAAGATGAAGAAAGCATATGTGGCTGTTGCTGTGATCTTGGCCATCACCGGTG
CCGGAGCACACTACTGGTAGACTAGTTGGCAAATGCAAGAACTGGAAGATAGCACGTAAA
GATAAGAGAATGCATCAGCTCACTTCTTAAGTAGTACCGCCTCCTTGCTTCTCCAATTGG
GGAAATTTGGACGGATTATTGATTCGATGTGAGGGGACAGGTAGGCCGGCAAAGTAACAG
GTAACTATATAGGACAAACATAAGCCAGCCAAACAGAAAATAATATACCTGATGCAGTCT
GCTAACTTAACTAATCATAATCACTGGATAATAATGGCAAGCCGGCCGAAAAAATAACCT
GGTCCGTCAGCATGAGATTTTTATTTTTAGGAAAATAACAAAGAGTCAGGTGGCCGCGTG
ATCAGGATGAAGAAGAGACTTCACCATTTGTCTTCATGAAGAACGAAACTCATGTTCAGA
TTAGGCACGAGATAACAGTTGATACAGAGAAAAGGACATTTCAGCCACCAGGAAACCCTA
CTAGTTAAAGAACGCACCCGAACACCGAGTCACCAACCAAAGTTCAGTATCTCTGCAGCC
ATGGACTCACCAAGCCGGGCATCTAACAGGGAAACAAGATCCATCCTGAGTGCTGTTCCT
AGTAGGATGCCCACCTCTTCAGCCTTCGTCACCGAGGAAGAGCAAAGTCTAATCCGTTGT
ATCAAAACAAAACAACAAAGCTCAATGAGAGGAGAAGAAGAAAAAGAGAAGGCTCCTTAC
TGAATATCAGAAAGCAAAATGAAGAACAACAAATAAACAAAAGGAATTGTAAAAAATGAT
CACCGCTGTAGGATTTTGACCTGGGCTTTTCAATTTGTAGGAGTTTTTGTCTTTGTAGGA
ACGGCACACATAAGATGAATTTAAAACACCCAAATGACCCGCCAATATACACGCAAGACT
GGAAAACGACAAACAACGTAATGCCACCCAGTGTTAAAATTCAAGGTGTCCACAAAACAA
ACATTACGTCAAGGACCTGCGGTAACTCTGTTATTGCATAGATTGAAATTAAACGATAGT
TGTGAACGAGTCACCAACAGATTAGGTTGCAACTTTTTCAATAAAATTCGATTAATGTAC
ACTGACATATCATATTCTTCAGAGAAGAAAGAAAATATCTTGAAAATGACACAGGAGCAA
GTGATCCATGCTCTTCAACATTACACTCCTAGCCATTATCAGATGCGCTTGATCAAACCT
ACCAGGATGATTACCAAAACAGAAATGAGAATGTAAGTAAACAACAAGTGTGAAATTAAT
GTATTATATACTGAAAGTTACTTCCTCTATTCTTTTTTAAATGATGTAACATACTTTCAC
TTTTCACAGTTCTGAGACACATTTTTGTTCATTATACAGCATATACATTAGTATAAGTTA
TAAGATTATTGAAAACTTTAAGAAACTAGTGATATAGTTTTCATATAGTCAAACTGAATA
GCTTTAAATATGCCGAGGATGAATTTTGGAAACTGACTCCTCGGATTAGAAAACACCATT
AACGAAGAAGAAAAATGGGCACAATAATTCTGGAACCTTGTCATCTCCAAGATACAATGA
AAATCTGTGCATATCTAGTTAAAACCCTTATGCAAGAAGAAGCACAACTAGACAATAAAC
AGATATACATATCCAGCTAAAGGCAACATACCGAGAAATTTATCATTTGCTCTTACTTGC
TAACAAACAATAGTGCTTAGCTTGCCAAGTACATAAACATAACATATACAGGCATAGAGA
CAGAAATATTCACATCTTATTTATAATTTACCATGGATAAGCATGGGAATGCTCTTCAAG
GCTAACTGGAATCCATAAAGCAGCCCCATACATGAACTGATAAATCCATCAGCTTTACAC
ACGATCGCACCAATGCAATGAACTAATGATAGATCTTATGCGCACACGCTAAAACAAATT
GCGCAGAAATATCATATCCTAGAACTTAACACATCTCAACTGACTAGTCCCTCCGTAAAC
AAAGCATTGCAATTCCAGCATTACATAGTAGAAAATCCTCAATACAAGCACGACTAATCA
AACTAGCACGACTTAACATTCAATTGTAACAGAAATACAAGGAACTGGATGCAGGGGGTT
GTCTTCACCTTGGGAGAGGTAGCTCCAGCAGGAGGAGTCGGCGGCGATGCACGACCGTAG
CCGCGCGCCAGCCACCGCGCTGTGGAGCGGCATAAGCGACTCCGCGCCCGCCAGCATCTT
CACCGCGGACCTGAGAGAAGGAGCAGCAGGATTGGAAAACTCTCGGGTTTAGCGGTGAGA
CGACACAAGGGTTGAGGATTTCAGGAATGACCTGCGGAGGCGAGGAGCGGCGGCAACGGG
AGACCTCGTCGCCGGGAACGGGCTCGCGATCCGGGACTTGGACCGGAGCGCAGCCGACCT
GGCCGCGGCGGCGGCGGAGCGGCAGAAAGACGCCATCGTGGTCGTTTCCTGCGATGGAGG
AAAAGCGGAAAAATGTGTGAGAAAATGGTGTGTGGGCTACTAATAGTTAAGCCGGGCCGG
GCAGGCACTTGAATGGACTCGAAGAAACCTAAACTGGGCCCAAACAATGGTGCAACTAAC
CCAGGGCCGTTTTAGAAGATATTAGGCCGCCTTGTCCGTTTCGTTTGTTTTTGTGTAATG
TCTCATCCATCTTTAAGAAAAAAAAACATTGAGTATCATATTGGACGTCTCTCAGTGTCA
TGGAGAGTAAATTTTTTTTTAAAGAAAAGGGTTACCCCTGTCCCATTTTGATAGTCAGCC
TGCACGTGTAACACACGTATTACCATGTACTCCATTTTTTTACTCAAAAAGTGTATTTTT
TATTGTTCGTCCTAGGAAGAAAATATATCAACAAAAGTGAAGAGGAGCTTTGGCGCAGTG
GTAAGGCTGCTGTCTTGTGACTATGAGGTCACGGATTCAAGTTCTAAAAACAGCCTCTTG
CAGAAATGTAGAAAAAAGCTGCGTACAATAGACACAAATTATTCGGACCCTTTCCCAAAC
CCTACGCAAGCGGGAGCTATATGCATCGGGTTGTCCTTTTTAAAATGAACAAAAGTATAA
GCAAGACTATGTAGTTGTTTAACAATCGTGGAAATAACCATAACTTCATCTACTAATAAA
AGCACGAGAGGGCAGATCCAAATCACAATCTCAGCCGTCTAATCATCTCTACTAATAAAA
GCACGAGA