Contig Data
morexGenes
Links



Map Locations of contig_138497 (4683 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138497

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7009 1 1503 bp MLOC_7009.1 Available Available LOC_Os01g67160.1, FRAME:-2, EVALUE:0.0, 13101.m07283 protein cyclin-dependent kinase B1-1, putative, expressed





CDS Structure of MLOC_7009






Contig Sequence (4683 bp)

>contig_138497 4683 assembly3_WGSMorex_rbca.fasta
CTTGCGGCGGCAAAAGGGTTAGGACGATAAGCAAATTGACCAAATCACCGCCCACAACTA
CTTGTGTTCTACTCGTACATAGAATCTATAAACCTAGCTCTGATACCACTATTGGGGATC
GTAGTAATAATTCAAAAAAAAAAAAATCTACGTCACACCAAGATCAAACTAGGAGAAACC
AACAATGATAGAAATAAAGCATCTTCATACCGTTGAAGANNNNNNNNNNGAAGCGTTACT
ATGAATGCGTTCGATGGAGTCGTACTCGCAGCGATCCGATCCAAACACCGAACGTTCGGT
GCCTCCGCGTTCAACACACCTACAGTCCGGGGACGTCTCCTCCTTCTGCTAGACATATGG
GGGTGGAGTACGTGTTCGGTTGGAGATGCTCTTAGATGATGTAGTGTTCTCTTTCTCAAC
CATGTCTGGGAGCCTTTGAGGATGACGTAATGTTGTAATCTGGAAGCATTCTATTGCAAA
TGTGTGTTCTCTGTTGCTGATGTTGTTAGTTCCTCTTTCAGTATTAGGAACTAGTGGGCT
GGCTCGCACATTTGCATGCCTAGATTCTTACTTTTTGTGGCTTTTGCCCTCCATAATCTA
GGCATGCAAATTGTGGCTTTTTGTACAATTTGCATGTGAACATACGTTTCTTACTTTTTG
TAGGGTTGGCCAAATAGTGGGTTTTGCCCTCTTTGCAACCAAGTCCAAAAACCGACAGTG
CATCTCTTTTACCAATGCCGACACACGATTAGAGTGCGGAACGATATCAAGGCATGCATA
GTGATTGTGCCAATATGACTTTGATGAAGGAGTGGTGGACCGACACCATCCTTAAAAGAT
CACAAGGTACAAGGACGGTCGCCCCGCCCTCATGATGGAAGAAGCTATGTGTTGTTGGCG
GCCGTGCCAAGCAACGAGAGTAATATTTACTTTTGAACTCCAGTCTTAATGGAAAATCTG
CTGCCTTGTTTAAAAATAATAATAATAATAAAAGATAAAAACATCAAGGAATCATGAGAT
AACATTGCAGCGCAAGTGACCAGTTCAGTTGCCTAGATGGCAAGCAAATCAAATCTCCAA
TCTCCCCGCTCCATGGCGAAGGCCCAACTTGGTCTAAGGCAACAATAACAACTAGAACTG
GGACTTGTCCAGGCTGTCGAAGTAGCGATGCTCCATTGCCGCTTTAGCTGAGATCCTGTT
CGCTGGATCAAACTGAAGCATTTTCTGCAGTTCACCAACAACCAAGAAACTATTAGCTCA
CATACAAATATCCTAAAGGACATAAAGAAATTGGGGTTTTATGTTGCTCTTAATTTACCG
ATAACAGGTCAAGTCCTTCAGGCTCCAGTGTTGGAACTGCACGTGCCAAATTTTGTGGCT
TCCACTGTGGATAGTCATGCCAGTCTCTCAAAGCGCATACTCCAGGCCACTGCTCTTCAG
TAGGAGTTCCCAACAACCTTTTCAGGTACAAATTTTAGTCAAATGATTCAATGCATACAG
AATGAAATAAACTGTCAGATGTTGCAAGTACTTCAATCTTTTTCCCAAGCCAGAAGTAAT
TTGTTCCAAAGGAAGTGAGTGCCAAAGCGAAAATAATGGACAGAATAGTTTACTAGGATC
AGCATGCCAATACACCATCCCATCAACCAAGCAGACAAAGTACTGTTGTCATTAACAAAG
TACTGTTTACATATTGTTGGTAATCATGCAAAGAAGGTAAAGTACCTGAAAATGTGAAGC
AGCTGTTGCAACTCTGAGTCGCCAGGAAAAAGAGCTTGTCTTCTGACCATTTCAGCTGTA
TTAGAAAGTTACAATATCAAAATGGGAAGACCTTGACAATTGCAGTATAGTGTCAAGTCA
AAGAAAGCAAGGAGAGAACTTGAAGCAGAACATAAAACTGGAGCTTACTTCTTTCCGAAT
AAAAGAATTTAGTATAATGTTATCAGATGTTTCTTTTAAATGCTATCCTTGACGAGATGC
ATGTGAGACCTTTAAAATTAGTGGTACAGATCAATGCTAAATCTTTTGTTTGATGTGAGA
TATACTATACATTTCTTTCTGCTTAATTGATTGTGCTCAAGTGCGGCAGTTCATATGCTA
TTGTATTTTGCAAGGGAAGTTGAATGTCGATTGCACATTTAATTTCAGTATAAAAAAAAA
AGGCATACAGTAATCTTGAAATTATATTGTCTGTAGTAAATTGTACTGCTTCATAAGATG
CATGAAAAAAAAAGTACGATTTTTTCTCTTGATGCAAGGTAAAACATATGTTCTTTTTTA
ATGATTACTCATCTAGTCTAGTGATCTAAACGCTCTTATATTTCTTTACAGAGGGAGTAC
TTGTGTAGTAAACTGTGCTGCTTCATAAGATGCATGAAAATATCAAACTTTTGTGTGCTT
GATGCAAGATAAACTATTTATTCTCTTTTACTGATCACTGCAGAAGTGTGACGATTTATG
TGCTAATGCATTTTTGTTCTGGAGGTTTTACATGGATTGTACTATTTGTTCTAAATAACA
AAGATCAAAGCCTAATTGCAATCGGCGTACCAAAGATGCAACCGATGGACCAAATGTCAA
CACCAGTTGAGTAATGTGTGGCTCCAAGTAAAACTTCCGGAGCTCTATACCAGAGTGTCA
CAATCTACAACACAAATCAGATAGCATGATAAGGAACTTACTAGAGCATGCTCAGTAAAA
TCTTAGGAACTTTGTTACTAAGCAGTACCTCATGGGTGTAGCTTTTCATGGGAACTGTAA
AAGCTCTGCTTAGCCCAAGATCTGCAATTTTCAGTACCCCTTTCTCCTTGTCGATCAACA
AGTTTTGTGGCTTTAAATCCCTATGAAATCAAGCAGGGTAGCATTAACCACATGGTTGCA
AATGCAATGTTGTATCTAGCTGACAATTGCAGCAACAAACAGCACGGAACAAAAGTCTAA
CCGGTGAAGGACGCCATGGCCGTGGCAATGCGCAGTTCCTTTGCACAACTGGTATAAGAA
ACTCTGTAAAGGGAGCACGAAAGTTACTCATTGTCATTTTCATGCAGAAGCAATGAAGTT
AAATAACAGGGAGTGCAGCTCAGGTGCATGGTCGCACACAATAGAAGCTAATGGAGAGAA
ACAAAATATGAAACGTAGTTGGTGAATAAAGATGGAATTCTAGGCAGTTAGAGCTCCAAA
CTGAATTGCCCATGAAGAAAATTTACCGTGGAAACAAGTAATACAAGGTTTGTATGGAAA
CAACAATGGCGAATCGATGGTGCGTTATCTGTTTCTACAGCAAGCACAGCGTTCGTTTAC
TTTAGGAATGAGACAGATTTCTCTATTCGACCTCAAAATAGAAATTGAGTGATCATCACC
AGCAAGGTACTGTAAATGCTGACAGCTTAGATTCCTAATTGGTCGTTGCAACTATATATG
CACGAATTTACACGGGCACCTTTGCTTTTCACGAAAAATCAGACCTTTCTAGTTACAAGC
ATGAGGCATTAGGTTGGTGTGTTGACCTGATTCTTGTACGATCTGTCCTCCACAATAACA
TCGAGCAGTGCTTTCAAACTTCTTAGTCTAACTACGATTCATACCGTTCTCGTTTGACAA
GATCGTAATACTGTAAATCGAAATGCACGGATCATAACAAAGACGTGACTTGAAGGTATA
GCAGATTTCCGTTGCGAAAGTAACTATGAATCAGCACGCGATGGAGATGGTACTAGTAAA
AAGGTCGTTGTTGCGACGGAGATGGTAGATAGATACCTTGACGACCTGCGTGGGGAGCGG
CCTGGGCGATGGCCCCTTGCGGAAGCCGTCGACGAACTTCTTGAGGTCGGTGTCGAGGAA
CTCGAAGACGAGGTAGAGGACGGTCTTGCCGCAGGGTTTGGTGACCTGCTCGACGGAGAG
GAGGCGGACGACGTAGAGGGAGGCGGAGAGGAGGCGGAGGAGGGAGATCTCGCGCAGCGC
GGTGGGCGGGATCCCCTCCTCGTCCATCTCGAGGCGGGTCTTCTTGAGCGCCACCAGCTG
CCCCGTCGCCGCCACCCGCGCCTTGTACACCTTGCCGTAGGTGCCCTCCCCCACCTTCTC
CAGCTTCTCGTACTTGTCCATGGATCGACGAGCTTCTTCGGGTTGACGACCTGGATGGAA
GAAAAGGAACCCTAGGTGATGTGGTGTGGTAGGGGGTGGGGTTGGGTTTGAAATGGGGGG
AGGGAGGAGGCCGAGGAGGCGAGGGTGGGAAGAAGAAGGGAACGCGAATGCGGGGCTGGC
GGCGGGAGCGTGTTGGGCAACGGTCGAATTGACGAGCGGCGCGGGGTCCGAATTGTTTAG
CGGCGCTGACGATTGACTAGCGGGGCACGGGTGCACATGGCAGGGTGTAAAGTGCGGTGA
GGCGCGTGTGTGCTGGCCTGGTAACGGCTACGCGACCGATCATCGCTCACTCGCCTTGAT
CTCATGGAAAAACGGAGGTCCGATTCTTGAAATTCTGAAAGAATCGGCAAAAAAAGACCA
TCGGGGCCTGTTTGAAACTTTAGAAAAATCAGCTCTGCTCTCAAAATCGCAAGCCAAACG
GGGCAACTCCACGGTGTCTAGCTCTACGAAAAAACTCAAATCTGAGGGCCAGCTTCGTGT
TTTCTGTGAAGCTCCTCAAGGGGTACTCCGAAAATTCTAGTTTGATAACTAGACGTGAAG
TTG