| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
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Predicted Genes from contig_138442
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6987 |
1 |
2071 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_6987
Contig Sequence (6928 bp)
>contig_138442 6928 assembly3_WGSMorex_rbca.fasta
ACAATCATATTGGCAGACTTGGAGTCCTGCCCTAGCTTCTTGTACTTGTTTGGGCACTTA
CTGGCCCAATGTTCCTCAGAACCACAANNNNNNNNNNNNNNNNNNNTCTTGTTCTTCTTG
AAGGTCTTCTTTCCCTTCATATTAAAGTCGGTATTCTATTGGACAGAATTCTTCCCCTTG
GGCTTGTGGGAGTTGAAGTCCTCTCATGTTCCATATTGGCAACAGAAGGACCTTCGACCG
TTTTTCCATGCGAGTCCTTTGCTCTCGAGTTCTGCTCAACACTCATATGGCCGATGACAT
CCACTATTGAAAATTCACGCCTCTCATATTTCAGAGTGGTAGCAAAATTTCTTCAGAAAT
TAGGGAGCTTAGCGATTATACACTCCATGACAAATTTGCTCGATAAATCGCACTTAAGAA
CCTCAAGTTCTTTAGCAATGCAGCTTGTTCTAATATAGAACGGTTCTCAGCCATTTTATA
ATCATGAAACTGTTTCATAACATACATCTCGCTCCCAGCATCGGTGGCCCTGAATTTATA
TTGAAACGCCTCCCACAAGTCTTTAGCAACGTCCACATGTAAATATGTGTCAACAAACTT
ATCTCCGATCACGCTTAAAACTGCTCCAAGGAAGTAGACAATTGCCTCCGTGAACGCCTT
CTCCTGTTTAGGAGTGATCGTCTCCGTAGGTATGAGATCAGCTCATTCCCGCAGCGCGGC
GCAGCACGTCGTGGCGTGGCATAGGAGTGCGCGCGGGCCTGTTCTCTTCTCATGCTATAA
TATCATATAGAAAAGAAACTCTCATAAAGGGATCCAACTCCTTCTTCATTAATAGGATGG
GACTAATTTTCCAACATCCATTGTCATACCACCACCTACATGGACCCTTAGATATTTCTA
AAATTGTTTCATGAGCCTTAAGCCCATCTCAGATTTCAACAGTATGGCCGCTTTAAATTT
GGAGGGGGCAAGAGCACACGACACGCCCATCCAATCGTGAAACGACCATCCATCTCTCTC
GGCAAGAGAACATGAAAATCAACCACTTGAAGCTGTTTGGTTCTGCTCAGAATTGCTCGG
AGCTGCATCACCCAGGTTCTTTCAGTGTTACTTAGGGCTGACTGGCGCAAAATGAAAAAA
AAGTTGACCCAAGAACACAACAATCTTTTTTATGACGTCTTTGTCTTAGGTGTGACCACT
GGCTGTTGACATGCATGATTTTTTTAAACACAATTTAGTATGTAAAATACTTTGTCGTGC
ATAGATCAATTTTGTTAATTTAGCCGGATCCTAACTTTAAAAGAAAAGTCATGGTGGTAC
AGGATTCGACTAGTGTAATGATCTATTCGAATAGTAGCAGGTTGTTATGAACTATTATCA
CGTTGTTTACATTTGATCATTACTGTAAATATCAAAAATCTAAAATTAATTTTGTTCCAC
CATTAATTTGCTTGTAAATTTAACTTAAATTATTTTAACCAACATGCTTGACTATCTGTA
ATTTATAAATTAATTTAAATTGCTTAATTGTACGAATTACCAGACAAAAGTTAGGATATA
ATAGCTTCTCTAACATCAATTATATTAGATATCAGAGCTTCCCAGCTTGGCTGCGACCGG
ATAGTTCATCAGCAAACGATTTAAACACTTATATGTTGCTAACAGGTAATTCTCATTTTA
TTATATATATATATTCCAGTTGTTTTCAACAGGTAATTCTCATTAATAATTAGATATATT
TAATATAAGGTGGAACATTGAGTTACTCCTTCATGGAGTATTTTGAAATTTTCTTATTAT
CATATCCAATCAAATGGTGTTACTTGTTCTTTATGAACAGTTGATCGTGTGCAGATAAGG
ACAGTTCACGAGCGGTTCTCCTGTCGTCATTAAACGGTACGATCAGTTTTGTCGCCACAA
ACATCAGAACCAAGAATGTCAACTGGAACTTGATGATGACGATTTAGTTCCTCTTACGTT
GCAGTCGATTTAGTTCCCTCTTATTTAATGAGAATGTCAACGAAATCTTCTGCAGTCGAT
TTAGTTCCTCTTACGTTGCAGAGACGAAATCTTCGGCCGGTGCCACAAGAAGACATTTTT
AATAAAAACAAACAAACAGTTCAACATCTAGATCTGACGCATTTAGGACGTATCATGATG
TATTGCCCGTCAGCCTGTTATTCAGACAGCAGTATTTGCAAGCTGAAAACCGTGAAGGGT
TGACAAAAATAAAACATAGGCGTGAAGAAAAAAACTTTCGAAAACAGAAGTCGATGGGGG
TAAGTATGGCCGCTTTAAATTTGGATGGGGCAAGAGCACACGACGCGCCCATCCAATCGT
GAAGCGACCGTCCGTCTCTCTCGGCACTTTGTGCAAAGGGCAACTCGTCCATGGATACAA
CCGAGCACCCGTTCGTCTGAGCCGTGTCAAAACAAATTCCAAACAAAGTCATCAAGATTC
AAACAAAGCAAAATCTACGTGATCTTGGTTTCGGAAGTATAGCCAGATATTGTGGCTTGG
AATTAAAAGAAGATGGATCTCCAAACAATCTTCTCCTGGCTGTCAATCTAGGCTCCATGC
GGCAGACAGGACCCCATTGAACGGCGCCTGCTGTTGACTCATGATATAGAGCCCTAGTAC
ATCGCGATCTAGAACTAAAGGAATCATCGGAAGAGAAAACCATCGATCCAAGTAGATGGA
TGAATCCAAGAAACAGGCAGAGTCGATCTGAATTCCACGAACTCAAACAGCTTAAAACGA
AGCAAAAAAAAAATGCCATGAGAAATGAGAAAGAGGAATGGTTGCGGCGGCGGGGTGACG
AGGGAGGGGCGATGGATGGGATGTTCTTAGGGTTGGTGAAGACCCTTGCATTTTATAGCT
GCAGTCCTGCACACGCCACATATGAGAGGTTGACACGTGCCGCCAACCCACAAGACTCTG
CCTGGGCCTTGTACCAGCACATGGCGCCCCGGCCCAACAAACAATATTCCAGGCCGATAT
TGCTTCGTTTTTCTACAGCGCTCTGAATCGTGGGGGGCACTCTTTCGGGAGAGCAACTAG
TTTTTTTTTTTTAACTTTCTCCCCTCTTGCTAGGGTTTTTGTCCTCTCGTAGGCGACGGC
GGCGTTCGTCATCAACGTTGAGGTCTTGCTCCCCTACGACCTCCCCACGCCACCGTTTAG
CCGGGGCTTGTGCTCCCGGCCGGGGGGACGTCGGCGGTTCGGTTAGGATCAAAATGCCCG
CGGTCTTTTCACGGGCGAGAGAGATCATGGCGTCGAAAGCTTCATCCTCGGGTACCTCTG
ATCTGGAGGCGATGATGGAGGAGCTAGGTCTGAATGAAAAGAATCTGCAATATGTAGTGG
TCGATGAAAAGGATCTGCCCGAAGAATCCACACGTTGGATGGCGATTGCTAGAGTGCACA
CACCCAAATCCTACAACCAATGTTGGTTTTATGGCACGATGAGGGTCACCTGGGATCTAG
CGCAAGAAGTAAAAATTCGCTCACTTGAGGAGAGTCTCTACACCCTCCAGTTTCAGTGCC
TCGGAGACTGGGAGAGGGTCATGGAAGAAGGTCCCTGGTCGTTCAAAGGTAAGGATGTGG
TCAAGGCGCCATATGATGGGTTTACTCGACCATCCACCATTGTTCTGGACAAGATCGAGA
TCTGGGCGCAGATTCATGATTTTTCGGAGGGATACTTCCCGCTGATCAAGTCGCTAGCTG
GCACTATCGGTGAGTTCGTTTTCGCTGAGCCAAAATCCCACGACTTTGAAGGGAACTTCT
TTCGTGTTCGTGTCAAGATCAATGTCAGAGAACCTTTGAGGAACGCTGTTTCGTTGGTCA
AGAACAGGGAGAGGGAGATCTTTAGAGTCAAATACGAAAGGCTACCTGACTGGTGCTTCG
TCTGTGGCCATCTAGGGCACCTGCACAAGGAATGTGGAGACGGGGTTCATCCACCCAAAG
CCCTAGTCTTCAAGGATCTGCGTGCTACCTGGTTCTTGGGACCGGGTCGGGGGCCTGGTG
AAGGGAGAGCTGGAAGAGGAACAAGAGCTCAAGGAGGTCGTGGCAACGGACGTTCTGGTC
GAGGCGGCCAGAGCCGAGGACAAACTGCTAATGAGAGGTTTATGCATGAGGATGGTGTCG
ATGCCGATATGGAGGAGGCAGACATGAATCGTAAGAGAGGTTCCCTCGGAAACATACCGT
TACTCGTTGCTCCAGGAACCACATCGTCAACACAGGGAGATATTCCCATGCCCCAGACAC
CTCTGTTCCGGCCAGTCCTTCGTCCAAGCATGAACCAAATAGATCCAAGACCAACCTGTC
CACGGCAGAAAAGAACCTGGGGAAGAATAGAGTGGCAAGTACTAACAATGATGCGCGTTT
GGTGGGCCCCAATAGTGGGTCACGCCTAGCGCAATGAGTTGCTTAGTGTGGAATTGTCGT
GGGGCTTACAAACCAGCGATAGTTCGAGAGCTTCGGGACCTCTCGAATCAATTTGCCCCT
TCTATTGTATGCATACTTGAAACACAAATAGAAGGTTCTCGTGTAGAGGGTCTGGTAGGA
TCTCTAGGATACAATAAAACTTTTGTTGTAAGCAGCTCTGGTAGAAGTGGGGGGCTAGGC
ATTTTTTGGAATGAAGAAATAAAGCTAGAAATTCTTGGTTATTCGGAATACCATATTGAT
ACTCTTGTAAAAGAATTGACGGGCATAGAGACTAGGATCACCTTCGTCTATGGTGAATCC
CAAGTGAATGAAAGACATAGAACTTGGGATATGCTACGAGGCATTGCAGGAACGGGCAGT
TTGCCATGTGTGGCGATAGGAGACTTCAACGAGGTAATCCATGCACACGAACATGATGGA
GTGGGTAACCGCAGCCAAGCACACATGGATGCATTCCACGATGCACTGGATACCTGTGGT
CTGACCGACATAGGGTACAAAGGACAATCTTGGACTTTTGAGAAGAAGGTCGCTGGAGGA
AGTTTTACGAGAGTCAGATTGGACAGGGGTGTTGCAAATCTAGATTTGATGATAGCCTAC
CCCACTGCCTCGGTGGAACATCTAACAGCCACTACATTTGATCATGCTCCTCTTCTGCTG
CGGCTGCAAGAAACGCAAGGGTGCAGACGGGGGCCGGAGCCTTTCAAATATGAGGTTTGT
TGGGAGCGGGAGCAATCACTGAAGGAAGTTGTGAGTGGTAAATGGGCTTTTGGTCCGGGA
GACTCGGTTGGCGAGGTTAAAGACAAGCTCCTCTCGCTGTCATGAGAACTTACGGCATGG
GATCGCACGCACTTTGGCAATGTCTGAAAGGAGATAGCGGATCTGAAACAAGAGCTCAAG
ATATTGCGGGAAATACCGGGTAGAACCGGACCATCGAGGCAAGAGACGAAAATAGGGGAC
CGACTGGTTGAACTATTTCATAGAGAGGAAATCTTGTGGAGACAGCGAGCTAGAGTAGAT
TGGCTTGTTCATGGAGACAAGAACACCCATTTTTTTCATCTACGTGCTAGTCGTCGGACA
AGGAAGAACCAAATCAAAGCATTACAGAAGCCGGACGGGCAAATGAGAGAGAACGTGTCC
GAGATGGAAGAGATGACAACCTCCTTCTATAAAATCTATACACAACAAAGGGGGTCCATG
ACATGGAGCAAGTGTTGGATATTGTTCCATGCAAAGTCACACATGATATGAACGAGGCTC
TGAATGCACCGTACAGTAGCGAAGAAGTGAAAACAACCCTTTTTTAGATGTTTCCCACCA
AGGCTCGTGGACCGGATGGATTTCCAGCTCACTTTTTCCAGCGTCACTAGGAGATCTGTG
GAGAGGAGGTGACGAAAGTGGTGTTAAAATCATGGGGGGAACGGAATCTGCAGCATGCAT
TAATGAGACCATTTTGGTTCTCATCCGAAAGGTAAAAAATCCTACCCTGTTAACCCAGTT
TCGTCCTATCAGCCTATGCAATGTGCTATACAAGATAGCTTCAACGGTGATCTCTAACCG
TCTGAAAATTGTGCTACCTGACATTATATCTGAGGAGCAATCCGCTTTCGTACCAGGGAG
ATTGATTACTCACAACATCATAGCAGCTCATGAGTGTCTCCACTTTATGAAAAGAAACAA
AGCTAAGAAACACCAAGCCTTTGCCCTAAAGCTTGATATGATGAAGGCCTACGATAGGGT
CGAATGGCCATATCTTAGAGCAGTTATGTTGAAACTGGGTTTCTCTGAACAATGGGTGAA
CATAGTTATGGGGCTGGTTTCCACAGTTAAATTTTCTGTTATGCTCAATGTAAAGAGGTT
AGAAGAGTTTGAGCCAACACGTGGTATAAGACAAGGGGACCCAATTTCTCCCTACTTGTT
CTTGCTAGCAGCAGAGGGCCTTTCGTGCGTGTTAAGATCCATAAGAGAGTCATCCAACTT
GAGCGGTGTATAGGTAGCCACTTCGGCACCACCGGTTAACCATCTATTATTTGCTGATGA
CAACCTGCTATTTTGTAAGGCTAATAGTAGTGGAGCAAACGAGGTGAACCTAGTCTTGAA
TAGTTATTGCCAAGCCTCAGGCCAACACATTAACTTTGCCAAATCATCTATATTTTTCAG
CAAGGGGGTGTCAGAAAATGTTCGTGGGGAAATCAAGAATCTGCTCAATGTTCCTAATGA
AACATTCAATGAAAAATACATGGGTATGCCGTCAGATATCGGAAGTTATAAGAACGTGGC
TTCCAAATATTTAAAGGACCGCTTGTGGAGCAAAGTTCAGGGATGGATTGAGAATACTTT
GTCAACAACAGGTAAAGAGGTGCTCGTCAAATCAGTTGCACAAGCCATTCCAGTTTTCTC
AATGTCTTGCTTCAAGCTCCCAAGAGGATTATGTGAACATCTTAACATGCTTAATAGGAA
ACTTTGGTGGGGAAGTAAAGAAGGCAAG
