Contig Data
morexGenes
Links



Map Locations of contig_138393 (5547 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138393

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6958 4 1385 bp AK249121.1 Available Available None





CDS Structure of MLOC_6958






Contig Sequence (5547 bp)

>contig_138393 5547 assembly3_WGSMorex_rbca.fasta
ACTGGTTTCTCCACATACCCAAACCAAAACCAAACTAAAAAAAGCTCAACCCAATAAAAC
CTAAACCAATCAAACCCAAAGTAATAACCGAACCGTTACACCCAGTTTTCTAATAACCAT
TCCCAGGTTTAAGTCGCAGCGACCAGAGCTACATGTGCATCTTCTTGATGATGACCCGGA
CGTGCAACATGAAGTCGTGGTGCATGACGTGGTCGTCCTCGTGTCATGACTTGATGACGA
AGGAGACGACGCCGACGTTGAGCGCGCCGAGGCACACGACGTTGTCACGGTGTGCGGGGA
GCTCAAAATGCACCAGAAAGTCCTCAGGGTCGTGGCTGGTCACCCACAACAGGTTAGGAG
GGGTGTGGAGCTGCGCATCGATGGCGCACCTCACAGACATCAGACTGGCCACATGGTTCT
TGGTCGCTGCACAGAGCAGCACGATGTGGCGGTACAACACGACGGTGGTGCTCCATCTTC
GGAGACTCAATGAGCATGTTGTGGCTCGACCTCGGGCATCGCAAGGGGTAAATGTGGTGC
ACGGGAGCCATGGAGGCTAAAGGAGAGGGGAAGAGCAACCGCTCTTGGATGGGTCCCCTC
CCAGTAGTCGAGCCTAGATGCTACTTGACGGAGCCGCCACCACACCAGTTGCAGTGGTTC
TTGGGCCACTCCTTGGCGAAGTAGCCTGGCTGCTTGCACTCTATGCAGCGAAGAGGATCC
CTACAATCTATGCGGCGATGGACAGGACTGAGGCACCATAGGCAGAGGCCCTTGAGGCGG
CTTAGGCCCTGCGCCCAGGATCGACATTGAAGTCGGGTCCTCGGGCGAGGCGGAGGGTGC
CCGCTACGAACCGACGGGATATGTCCGCGTGCTTGTCTTCATGAGACTTGACTGCCATCC
ATCCGTCGACGCCCCTCGAAGAGGAATGCTACCGGGTTGGGGAGGGTACAACCACAATCG
ATTTTAGCGGTCCGTTTTGGGGGGGGGGGGGGAGAGGGAGTGCCTCCAGATTCGGCGTGG
AAAAGCCAGCGGCCGTGCAGGAGTACTCACCCCGTAGCAGCAAACGCGGCGGAGAGGGGG
GGTCGACCATTGACGCGCCGAGCTAGGGCAACGAAGAGACCGGAGCCCCGGATGAACCGG
TAGATCTGGCTGTGCCCGACACGGGCGCCGGCTGCCCCCATCCTACGCTGTCCTCCGAGC
AGGGAGGGGGAGCACGAGCGGCTCCATCATGAGTGCCCCATTAGGGGAGGCGGGGCATGG
CAGTTTGGGTTGCCGTCGCGACTGGAGTGGCGCGCGGCACGGGGAAGGGAGTGGGAGCTC
AACTCAGGTGTGATTGGGTTGTAAGACTATTTTCATAGATGTTCATTAAGGAAAACACAC
CGTTCCACCAAAAAGATCCACAACTCTGCATAGATTGAGAAAGAGTTGAATCATAAAATG
CATTCCATACTATTATGATCCATGGTAGGTTTGCCTTATGCATGGATTTATGTAGAAATT
TCAAGAGTAGAGCTTTGTTTTGGATTTGTAGATACTGTAATTTGAGTTTTCTTTAGTTCA
CTGACTAGATCGATCTCTCATATAAGTTTTGTGATTGTACTCTACTCACAAAAGAAAGGA
TAAATGTACAAAAGAAAAAGCAAAACCGTGGATATTGGTCGGCCGAATATCACCGTGCTA
GTAATGTCACAACAAAGTGACAAACACGTCTAGATTTACGAAATCACTAATTGAGGAGCA
CTCTTTCCAAAGATCACTCCCACCTTCGAAGGTAGCGACAAGTGGCGCATTGCATGTGTG
TCACTTGCCGCAACTTGGGAGTTTTCACTGTTGTCAAAAAAAACCCTGGGATTTTTCACT
TTTTTCATAGATCTGTATTTTTAAAATGTTTTATCTCTTAAACCGTTCATCAAAATCTCG
AACCATTTTCATTGTTGGATTTCTCGCGTCGAGGTCTTCAAAACTAGGTCCCATGTTGAT
AGGTTTTGACGATTTTTTTCACAAAAAAACAGACAAAAAAAACCAGACAGAAAAAACGCG
GCTCTCCCGGAAAAAACCGGGTTTTTTCGTTTCAAAGAGGCACGTTCATGCCTCTCGCGG
AAGCAAAACCATGCGTCTCGCGAAAGCAAAACTGTGCCTCTCATGAAAGAAAAAGAATAT
AGAATATGCGTTTTTTTCGTTTTTAAGAAGCATGGTCGTGCCTCTCGCAGAAACAAAATC
GTGCCTCTCGTGAAAAAAACAGAATTTTTTTTTTTTTTGTTTTCGAGAGGTACGGTCGTG
CATTTTGCGAAAGCAAAATCGTGCCTCTCGTGAAAGTAAAACCGTGCTTCACGCGAGGCT
TTTTTTGGTTTTTCGAGAGGTCGTGCCTCTCGCGAAAGCAAATTCGTACCTCTTAAGGAA
TAAAACTTGTTTTTTTTGTGTGTTTTCGAGAGGCAGGATGCAAAAGCAAATTCGTGCCTT
TGGTACAAGAAAAATCGTGTTTTTCAAAAAAAGGAAACATATTTTTTCACGCAATTTTTT
TCATCCAAAAGCTAAGAAAGGCAGTGGAAAATCGAAACACCAAACCCCCTCGCCTAAAAA
GCCGAAAACACATGCGGGGTAAAATAGAAAAAACAAAATCGGCCTAAGAGTTCTATTGGG
TCTAAACATGCAGATGGGCCATTGTTAGGCGCCTCCTCCCACAGCCCCCCTCGCGTTTCC
CCCCTTTTCCTCTCGTCACAAACAGGCCTTTTGTTCTGGCTGCCGATTTGAGTACAGCCA
GCAGCGCCCGCTCCTCCCCCTGGCAGCCGTCGATGCCTCCCCCGATGCAACACCTGCCGT
CCAAACTTAATCGGGCGTGACTATAAGTTCGCCGCTGTCACATCCGAGCAGCTTCTCTAG
TCTTGTCCCCTCCCGCGGCTAGGGTTTCCTCCGCTTCGCTCTCACAGGTGAGACCCCCGA
GCCCCGATCCGATCTCGCCCCCCGTCCACCGTTCCGCTCGATTTCTCGCTTCGTCGGCCC
GCCGCGCTGATGCGTTGTGCTTAGGCCCGGGCTCCCGCTCTCTTGATTCCTCCGCGGAGA
TCCCGTCGGCCCGTGATTTGCTTGCTCGTACGGATAGATCCGCATCCATGGCGTGCCGTA
TCCGAATTAGAATTAGATATTGTGAAGAGGCGGCGGTGATTTTCTGGATTTTGTTGCGGT
TTTGGTGCGGATGATTCGCAAGGGCGAAAATAGTATGGTCGCAGCTATGCTACTACGTGA
TAGATTGCGTCACGAGATGTACGTGTGCTGCTCTAGTTGAATTTGTGCTAGTTTGGCTGC
TTTTTATCGGGAGGAGATTGCCCTGCTTCGCTGTTTGCTTGCGTGGTGTCAGCGGTTGTA
AGTTGTGACATTTCGTTGCTTGTTTCAGTGCAGAATGCCTCGCTATGATGAGCGTGATCG
TTACGGCGGCAATACAAGGCTGTACGTGGGTCGTCTTCCCTCGCGCACCCGCACAAGGGA
CCTTGAAGACCTCTTCGGCAGATATGGGAGGTAAGCAAGCAGAATTTTTCTCAGTCAGAG
CTACTTTTGCCTTCTGATGGTTGGCAAGGCCCTGAACAATTATACTAGTTTCTTCTTATA
CAATTGATGGATTTTGATGGGTTTCATATGTCACCTTTGCAAATCATGTGTGATTTAGCT
TGTAGTCAAATAGGTCTGTGCTTTGCTCTATTGTCTGAAGACATGGTAGAGCAGAAATTG
AGACACGTTTTTTTGATTTCTTGCACCCAATGACATTGTCACCCACACAGTTACTTTGAG
GCAATGGCTCTCCATACGGGTTACTAAAGACAGCACCCTGTGCTCTCTGAACATTGTTCT
CCCCCATTGTTTTTCGTACCATCACATGTATCCACAAGCCCTTCATGTTTTAACTTGGAT
GATCTTGTTGAAGGTTTTGGGGGCTTACCCAACCTCGGTGTCCATGGTGGATTGGTGGGA
GGGTGCCCTTGGTGGAATTGGTGGCTATTCTCGCAAAGTTTCTAGCAGACTTTGGCGATT
GTTTTCAAAAAATATATTGCCTGTTTTAATGGAAATCACAATCATGCCTGGTGTTTAATT
CATTCTGAGTGGTGATACATTTATCTACTTGCGTCTTGATGGTGTTACTGTTTCGGGAAA
CCATTTCCACAGAGTGCGACATGTGGATATGAAGCATGAGTTTGCATTTGTTGTAAGTAA
CCGCTCTTGGTCACACCTTGTTTTGACATTTTAATTCACGTTAGTACTGTTCACATTGAC
ACAACTCCTTTTCTTCTATAAATCTTATTGCAGGAGTTTAGTGATCCCAGGGATGCTGAT
GAAGCAAGGTACAACCTTGATGGTCGTGACTTTGATGGAAGCCGCATGATTGTCGAGTTT
GCTAAAGGGGTAATTCTAATATTCCTCTCTACTATTTCTTTGTTGATTTATGTGTTTGTT
GTTTGCTGTTTCTTATTACGATATTCCTTCTAGGTTCCGCGTGGCCAAGGAGGAGGAGGT
GACCGTGACCGTGGCCGTGGTGGTGACCGTGAATATATGGGCCGGGGGCCTCCTCCTGGT
TCTGGCCGCTGCTTTAACTGTGGCATTGATGGCCATTGGGCTCGTGACTGCAAAGCTGGC
GACTGGAAAAATAGGTGCTATCGTTGTGGAGATAGTGGCCATATAGAAAGGGATTGTCAG
AACAGCCCTAAGAACCTCAAGTATGTCCTATGAGTTGTCTTTTCTGTTCTATAGGCAGAG
CATATCTGACTTCAGTTGTGTTAATGAACCAGGCGTGGAAAGAGTTACTCCAGATCTCCA
TCTCCTCGCCGCGGAAGGGTGCGCGATAGGAGCTACAGCAGGAGTCGCAGTAGGAGCTAC
AGGTATACGTTGTTTTCAAATTTTTGGCACCATCTCCTGCTGATTCTATTGCATGATTCA
CTTGTTCTGGTAGTATGCTTAGTCTGAATTCTGAACACGGCACTGGCATGTTTTTTCCTT
GCGAACTAGAGACCTATTCTGTCCAATTATCATTGTATTTCCTTTTTTGTGTATTGTTTT
TTCTGTTATGCATAGGTTTAGTTTATGCTGCTACTCAGCGGGCATAGGTTTACTTCATAC
TCCCTCAGTCCCAAAATAACTGTCTTAACTTTGTATTAGAGCTAGTACAAAGTTTTATTA
AGCTTAAGACACTTATTTTGGAATGGAGGGAGTACAATTTACTAACCTGATGAATGTGGG
ATTGTTTTTTGTTATGCATATTCTTAGTTTCCGCTGCTATTCTGTGAGCATAGGTTTACT
TCATGCTACCTCTGTCCTGTAAATATATGATGTTTTAGCAGCTCAAATGAACTGCTAAAA
CGTCATATACTATGATACGGAGGGAGTACATTTTACTAACCTGCCGAATGTGGGGATTTT
TTCTCTTATGCATAGGCTTAGTTTCTGCTGCTATTCTGTGGGCATAAGTTTACTTCATAC
TCCCTCCGTCCCAAAATTCTTGTCTTAGGTTTGTCTAAAAATGGATGTATCTAANNNNNN
AAATGTGACTAGATACATTCATATATA