| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_138379
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6948 |
3 |
1525 bp |
MLOC_6948.3 |
Available |
Available |
LOC_Os05g26954.2, FRAME:+3, EVALUE:2e-93, 13105.m10315 protein saposin-like type B, region 1 family protein, putative, expressed |
| MLOC_6950 |
3 |
1062 bp |
MLOC_6950.3 |
Available |
Available |
LOC_Os05g46480.2, FRAME:-3, EVALUE:8e-48, 13105.m04962 protein late embryogenesis abundant protein, group 3, putative, expressed |
| MLOC_6949 |
1 |
292 bp |
MLOC_6949.1 |
Available |
Available |
None |
CDS Structure of MLOC_6948
CDS Structure of MLOC_6950
CDS Structure of MLOC_6949
Contig Sequence (7230 bp)
>contig_138379 7230 assembly3_WGSMorex_rbca.fasta
TTACTTCCATATTTTTTTTCAGATTTTTTAAAACCGAAAAGTTTGAATTTTGAATTATTC
AAAAATTTCGACCTTCATGGAGGCCGAGCTCCAAACGTCTGCACTCGTAACACTCTTATA
TTAGTTTACTTAAAACTTAAAAGCAGGGAGTATAAACACTTTTTTCTTTTACCATTTTTG
GATTTAAAGCATGGAAAAACAGAAAAAAAAACAGATGGCCTAGTAATGGCCGCAACAAAC
CCAGCCAGTCAACGCCGTGGTGTTCTCAAACATCTTCTCCCTGTCTCTGCCTAGCTCTTC
TCGCTCCCGCCCGTCTCCGCCGCGGCCGGCGCTCGGCCGTCCGCACACGACGCCCCGCCC
CGCCCCGCCCACCCTCCGCTCCCATTGTTCGGTCGCCCCAGGATCCTCATCCGAACTTAA
GGTAGGCGCTAAGAAATTCACCCTGTTTAAGAGTAGATCCGATTGAGGGGTAGCGATATC
ATGTCAGGAGCTCGTGTTTCCGCTAGATGCATGTTAAATTCGTGGAGAAAACTATGGTAT
TGATGGTTCGCCAGCAGTTCTGCAGATTGAATTTACTGTCTGTACATACCACTGGGTTGG
GTTAGTTTCTCTGCAATCCGAGTACGTATCTTCCAAGAAGTATGCAGAAAGGGGAACAGC
TGGTGCCTCAGCAGTGGCGAACTAGCTCATAATAAAGCTTACCTGGATTCTTTTAGCAAT
TAGCAAAATATTGATGCTATTATGTACTATATGCTTCTCTCTTTTGTACTGTAGTTGTTA
CATTTAATTGCTTGTCCGTCTCTTTATTAACTCATGTGTGTTAACAGACAAAATGGGCTC
AAGAGTTTTTGCTTTGTTCATCACTGTCGTTCTCCTTTTGAGCAGTAGAATCTTGGCCTT
GGACCATACTGGTATGTAGCCGTTTTAACTTGATCCTGCATCCAGTTGTAAGCAAGCAAT
ACAAGATTTATTTTATAACAGCTGTTTTGTTTTTCTGAGTAGATTCTTCTTTTTATTATA
GTACTACAAGATTGTATGCCGAAGGTACCACAAAAAATCGGGACTAGAAGTTCCGGATCG
ATGTTCATAACATAATGCACAAGTCGATGCTATGTTAGGCCCTGTTTGGGATGCATGGAT
TATGTTCTCCTCCATGGATATTTGAGGTTCAGCCAGAAGTAGGAACTAGAATTTTCACTA
TATCCATTTTGGTTGCGAACTGGTCTGGACCCAAGTCTGGTAGTAGTACCTGTATCCTGC
CAGGCTTGAAAATTAATTTCGAAAACCGTCCACTCAGGAAGGAGAATGGAAGGTATAATG
TTTTATATCTGTTTATTTGCCGTCTGCACGCATGTGGTCTTCTTTGACCATAGGCCCTCT
GAATGTGAGGAGCATGCACTTATTCAAACATCAATACAGAGTTGAATGAGGAGGGATCTT
CATTCCCAAATCCCTTAGTTCTCTTATCTCTATGTAAAAAATCTAATCAATGCCTATCTT
TTCCGCCTGGCACCTCTAATTTTTGTATACCCAGTCATGGACTCACCAACAGACAATTAT
CACAGATTACTACTTCAAATACTTTTATATGTTCCAATCTTGTCAATCATGTCAGGATAA
AGTCAGGCTCATAGCATGTTGATGATTACTGATAATCTCCATCTATCAATCTTCTACACA
TCAGAGATCTACTTAACCGATGTCTGCATGTCCTTGGTTCTTAGGGTTTAGGGTGTAGTA
TAACATATGAGTAATTTGCATGACCGTGTTACATACTATTGTTTTCAGAATTTTGTTTGT
TTGCTTGTTGTGTACGTTTTCACAATATTTGTATATTCATTCTTGTTTTAATCAATTTTT
TATGTCTTATTTATTTGATTTTGTTGTAGTTGATGAAAAGACAATAAATGAGAACACAGT
ATCACTTACAACAACAGGAAGTCCACAACTATGCCAACTTTGTGAGCAGTTTGCCACAGA
AGCCCTCTTCTATTTGAAGGAGAATGAGACACAGATCGAAATAATACATACTCTTCATCA
AGCTTGTTTGAAATTTCATTCACTTAAGTTAGAGGTATTTTTTTTAAACTTAAAGTAAAG
TCAAATGCTCCCTCTTTCTTAAATAGTTATGCCTATGTTCTAAAGCGAGCATTTCGTATT
TCACTGTGCTCTTGATTTTTACGTGGCAGTGTACAAAGTTGGTTGATTACTATGCAGCAC
TGTTCTTCGCACAAATTGATTCTCTAAGCCCTGAAGAATTTTGCGTATCAGCAAGTCTTT
GTGAGGAAGTTACATACATTCGCCTCCCAGGACATGAACATGCTTGCACCCTTTGCCATG
AGGTTGTTGATGAGATTCGTACTGGTCTTGAAGACCCTGAAATGGAGGTATTCTTTATAC
GATTTCTTCATTTTGAATTATTATGGACGTTCATTATGTCCTTTGCGGCTGATTTAAATT
ATTATGTTCTGAAACTCCTGAGTTACATTTGATGTATAAGTATACGTCTAAATCTAGTTC
TCAAGAGATTATTAGCCTTTTCTTTATCTTTCTTATGTTAGGAGAGGGTATAGCAATGAA
TAACTTAGCTCAACCCTTGTCATTCTTCTCTTCATTTCTCTGCTATTCACCATGTTGATA
CTGTAGTTTATCTCGCTAGGATGGAGCTCTCTGGTCTATAGTACGAAAACTACTAGTCAG
TCCACATTTGGAATTGTTTGTGCAAGCATAAACCAGGGAAAGATTTATCGTTTATCTATA
GTTGCCTGTCTTGTCGAACACCCCAAGTAGGTTGTTTGTCCAGGTTATCTTCAGTTTGGA
ATTCAGACATCAAGTAGAGCCAACAAACCTAGTGACTAATGCAATGCCGAAATGTTATGA
AACATGGTAGGGACTGACCAATTGCATGTTATTTTCACTGATCAGTTTCCTACATGCCAT
ATCACAGACAGTTAACTAGCATAGTCATAAGGGGTGGTGGGTTGGGTTGTGAGTAGGTGG
TTATGGTTTCAAATGCTGACTTGCAACCTATCAGCTGGGAACTGCCAATGCTGGCAAGGG
TGGTCGGATATGGAACCGGTGATGGCAAGGGTGGTTCATATCTGATTTATAATCTAGACT
ATCTAGTCGAGACTCTCGAACAGGAGTCTTGGTTGAGCTATATGTTCGTGTTCTGATTCT
CCCTGGTTTGAAAGTGTCCTATCAGCTGGAAAGTGCCAGTGCTGGATTATGTGCATTTTT
TGGCTTTTATGCAGCACATAAATATGCCAGTTTTCTTTCATATTTGCACTGGCACCCAGA
TGCCTCTCTATCTACTTAACAGCTTGTGTGTGGTAGAAGTGAGTGACTAGCCAAAAGGGG
AAACTTAAACCTGCTATTGATCTGGTCTTGACAGCTCAAGATAATCGAGATACTTCTGAA
AGGATGCAACAATACAGAGAGTTTCGTACAGAAGGTAAGCATCTAAATATATCTTTTATT
GAAGTGCAGTGTATCTATTTTCAGTAGCATCATTCTTAATCATACCATATTGTAATTCAG
TGCAAGAAGATGATAATCCAAAACACACCGGTCATACTAGAAGATATCAAGAAGTTTCTC
AAGAAGAGAGATTTCTGCGATTCTATTCGTGTCTGTGGAGGCAAGATTGTTCGCCCTCGA
GGAGGAGGCCAAAGAGGCCTGTCTACTGCGTGAGCTCTTTTTCTCTCCTGAACGCGCATG
ACGATTGCGTGTCATTTAATGAAGAACGCGCGGAAGGATTTGGCTATCCGACCTCTCGCA
GTGATGTTTACAAGGGGGATTGGTGGTGTACGTGTAAGAAAGAAAAGGTGTTTACTTCCT
GAATATTTCCGAGCGGTGTATATATCATACAGCATTGCCTGCGTACCTGTCGAGAAGTGA
AATGAAATCTCCACTGGAAAGCATGCACGCCCTCTGTGATAGTTGTTCATGAAACATGAG
CAAAATGTATGCTTAAAGTGTACGGTATATCTGTATGTAAACAAATTATTAATTATGTGC
AGTGGACTTTTATTCTACTCCGTGTGATGCAGACCTGGCACTGTGTTTGACTATGCATTC
GTCATGCAGCTTTTGCAATTTTGATCAGAGCCATGTTATTTTGTACACACACCCCATCAG
ATTAATAAAGAGACCAAGATAGCGAAAATGCGATTCATACAAGCTAGCAACATTTGAGAT
GATTTTGCGTCAGTTTTGAGTCCACTTTCCTCGTCCGATATCAGGATCTGCGATGAATGC
CATGCGTGATATCTGTTCTAGGTCATAATGTTTGTGTACCAAAACCTGTTGATCCAATAT
TATGTACGTACAATGCAGGCCCTGACGATGTTTGGTTCAGCGTTGAAGTGCACCACGGTA
GATTTTTCAGTGGGGTACCTATTTGGATGAATCTGCTGACACCTTTGATGACTGTTATAG
GGGTACTTTCTACTGTATATAATTTTTTTGATTGGTGATGACACTGGGAAAATGACCTCG
TGTGTATGCGACGTATGTGTTGTATGTTCCCACGTTCCAAAGTTCCGACGGGTTACATCA
TGGCGAGAATGACTCGATTCGCTGTGGCCGCTACCGCGTCGTTCTTGGATGAGACAGACA
TGTCTGGTCACCCAGTTCATCGGAACAGAAGATCTGTATTGAGTATTATTATTATTACAG
CATAATCGAACTTGAAAAGAGAAGTGTCTGACGAACACAAAGTTACATCTCCCGTCAGGC
ATCCACACGGACCCAAGAGGCCAAGACACGAGATGTGCGTCAGGAGATGATGAAACTGGA
ACGTGAAATGTGTACCAAGAGAAGGAAACGAAAGCAAATTAAGCGCGAGCGCGTGTATCT
AATCTAGTGATCCCTGGTGATCTTCTCCGCGGTGGTGTCCTTGGCGGTGCTGGTGTTGTC
GCCGCCCATGCCCAGGGTGTTGGCCACGGCGTCCTTGGCGCCCACCACGGCGTTCGCCAC
CGTCTCGCCGGCCTGCTGGAGGACGCTGCCGGTCTTGTCCTTGCCGGCGACGGCGGACTC
CTTGGCGTACTGCGCCGCGTCGTATGTCCTGTTCTGCGTGTACTGCGCCGTCTCCAACGC
CTTCTTCCTGGCCGCCTCCGCCGCCTCCGCCGCCCTCTGCTTCGCCATCTCCGTCTTCTC
GCCGAGGAAGCTGCCGGTCTGCTCCTTGCTCTCGACGGTGCGGTCCTTGGCGGCCCGCGT
CGTCCCAGCCGCCTTGTCCTTTGCCGCCTGCGCCGTCCCGGCCGCCTTGTCCTTGGCCGC
CTGCGCCGTGCCGGCAGCCTTGTCCTTGGTCGCCTGCGCCGTCTGGGACGCCTTGTCTCC
GGCCTCGCCGGCCTTGTGCTTGGTGGCCTCCGTGGCGCTCCGGCCATGCCCGGACGAGTG
GCCAGCCAGAGCCGCCACCCGGTCCTTGGCCTCGTAGGCCTTGCCCTCGGCCGCGCCCAT
CACCTGCCCAGCCTTCTCCTGCAATGCAAACAATCTCAGACACGGCGCTGGCACGCGCGC
GCGGTCACTCGTCGGAGACCGTCGACACAAGTACGTACTCCTACCTGGGTGCGGCCCTCG
GCCTCGCCGGCGCGGTAGCTAAGTTGGTCCTGGTTCGATGCCATCTCTCACGCAGTCGTA
GCTAATCGAACAAGATAGTAAAATCTTAATGTATCACTTTGGCTGCTGCTCAACTTGGTT
TCGATCGATAGGCCTAGAGCAGAGCGGGGGACGTTTATATAGGCTGCGGGCTACGGGACA
CGTCGCGCGGCGGGGCACGTACGCGGCCGCCACGTAGAGAGGACACGCGGTGTGACGGTT
CCGTACGAGCTCGTGAAGCTCGATCGCCCCTATCACGAGCTGATGGCTGCTGATCCGATA
CAGCACATGCGGATGCCGGTGCCGAAGATGGCGATGTAGGAGTACGAGACGAACAAGTAG
GAGTACGAGTCATCATGTTCGAGAAAGAACAAGTTTTACGAGTCTTCTGTTAGGTGTCCC
GGCCTCATTGCAACTCCGTTCTCGGGTTGTCATGGGGCTGGTAGAAAATTATGCACGCAT
GCGATTCTTCGACTACCACGAGTGGAAAGTATCCCACTCATTATGTTATGATGCCGTGGA
AGATGAGGCACCGGCAACATGTTGTGCTAATTTTTCTACTCCCCCCGTTTCTAAACGTAA
GTCTCTTTATAGATTTCATTATAGACTACGTATGAAAAAAAATGAGTGAATCTATACTTT
AAAGTATGTCTTTATACATCCGTATGTAATACGTAGTGAAACCTTTAAAAAGACTTATAT
TTAGAATCGGAAGAAGTATAAGTTAGACGTGGAGGAGCGAGTGTCGGGTGGCGAATTACC
GTACAATGGCATGGTACTAGTGCATGTCGGAGAAGCGGAGACCACCGGAGCTGAAGAAGC
CCGCAATTGAAGCCCGGAAATGAGATTTGGCATTGCCGGTTGTGGCATGTTTTAAACTTT
CTTAACTTCTTTGTGTTTGACTAGGAAAATGATCTGTGCGTTGCAACGGAATAAAAATTT
ATCGCACTCCTCTAACACTTTTGACCCAATCATTCTGAGTTTAAAGAATAATAATTTTGG
TCAAATATCCCTAACAACAAGAAGAATTGTTCTTTGAAGTCTACCATCTTTGCAAAAAAA
ATATTATAAATGTATGGATTGTCTACGTTCTAATTTAATGTTTTTTTGCATGGAGTCCAA
ATTAATGTAGGAGCTAATCAAAATGAGAACCTTAGCCGCCGCTAGGACACTAGTGAAAAA
TGGGGCTTTATTCCTGGTTCGAGAGGATCTTTAGTTTCAGTTATGCAGTCGGGACTAAGC
CTTCGGAACTAAAGCCCCCATCTTTCAGTCTTGCTTGTGCTACAAACCGGGATTAAATGG
GGTCCACGTGGCCGCTGCACTGCGCTCGAGCAGGAGGACCTTTAGTCCCGGTTGGTAAAA
CCAACCGGGACTAACGAGCTCCATGCGTTTTTTGAAGGGGTTTGGAGGGGTTTAGCGGTT
TTTATTTTGTGTTTCTTTTTATTTTCTTTTTTGTGTTAGAACCAAAACCCTGATTTCTAC
TAGTGTGTGCGCGTCAACCACCTCTCCGCCTCGACGCTAGCTACTAATAGCAATGAAGGA
GTCGTTACACAATATCGTCATGAATATGAAGTGACATCTCTGGCTCGATGCTTGCTGCTA
ATATTCATGCATATATACAATATATATATA
