| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_138355
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6934 |
1 |
1952 bp |
MLOC_6934.1 |
Available |
Available |
LOC_Os02g58520.1, FRAME:-3, EVALUE:0.0, 13102.m06775 protein CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_6934
Contig Sequence (7404 bp)
>contig_138355 7404 assembly3_WGSMorex_rbca.fasta
ACGCGGCGGCGAGGAAGGGATGGAGAGGGAGTGGGGCGGCTAGGGTTGGGAGGGGGAGGT
AGGGGGGAGTGGGGAGGAGCCGGAGGCAATACATGGCATCTAGGGAATTGACACATTGCA
ATTAGCTCATTTTGGTCAATTCACTCAATTTTATAGTGGATATGTTTGTCATTCTCCTTT
AACATTTGTTGTGGCTGCCTGTTCGTGCGTGTGCGAGCGTGCTGGTGGCTGGTTAGTCAC
CGATCCTTAGATGGGCTGGCTGCTGTACCGGTTTTTCTCGTCTTGGCCTAAGAAATATTT
TGAAGTCTAGTCGTAAAAAGAATCCGTGAATTTGGAGGGTATATGCTCGAACTATCGAGC
CTGCCTGGTGAATTTGCCACACAATTGATACGTGTGTGAGAAGGGCGAACCCACGCTCCA
CACAATTGTCTCCACCTCCCTCACCGAAAATGCTAGACCTATTAAATTCTACTTACGTCT
ACTAAACCTTCAAACTAATCCAAACATGTCTCCTTGATTTTCAGGGATGGATGGACCCCA
CCCTTCTTTTAATCCAATTAATAATTGTTAAATCAGACTATCCCGTAAACGTACGTAAAT
ATTTACGTAGATGTAGCATTACTCCCTCCCTCACCAACGCTCGTACCAACTCTTTGGCCC
TCTTACACTACAGGTGTAGGCTGGAGCCACAAGCCCGCACCACCGCTGCTGCGGCCAGGA
CGTGTGTATTTCTGCCGGTGTTTGCGGTGCTATATATGTCATCGGTGTGGGACTAATAAA
ATGAAAACACCATGGCTCAATCAAAGGACTACTCTCTACGGCCAACGCTGCTGATTGATC
CATATGTGTAGGTACTCTTTATGTGGCAATAAAACATTATCATCTTAACATTTCATTTTT
TTTCAGATTTAAAAAAAAATTAAAGTATGATTTTCATAAAATTTTCATTGAATGTTGGTT
TCCATATGATATTCTCTCCCTTTGCTAATGGACGTTGTTGTGGGCAGCTTCTTTCCCTTG
AGCGCGCCCCATCTCGACACACGTCTCCTGTTCGCAGCAACGTCGGCCGCCTTGCTGCTC
TCCGATGCAACATCCCGCTGACTCCATCGCTGCACCGGGTGCTCGCAATCGCAACCTCCG
CCACTCCACTGTCGTAGCATCATCGGCCCCGACAACATATGTCGTACGTTGTTGCAGCAC
TGCTGCATTCTGGTTGCGGTTCCACCAAACGCTGGTTGACGTGGTGGTTGGTTAAGTGGT
CGAACCCACGCTCCATGGACTGGGAGATGGAAACCCGGAGAATATCATACAAAAACTAGC
ATTCGGTGAAAAGCGGTAAAAATCACAAGGAAAATATGTTTTGAAATTTTGTAAAATCTG
AAGAAAAAAATACGGGATATTAAAAGAAAATAATTTTTAAAAACTCATCAAATTAAAATA
TGAATTGTTTGTATAATTTCAGAAATTAGACTAAAAGAATGCTCAGCTATAAATTTAGAC
TAAAAGAACTCTCGTCTATTAATTTTTAAAAGTCCATCAATTTAAAATATTAAAGTCATT
TTAGGAAACATGTATGCTTTCAAAATTATCATATACGTTCAAAACATTTACATTTATTTT
ATAAAATATTCATGTTGTACATAGAAGGGACCTTTTCATGAGAAAAAACAAATAAAAATA
TGAGGGTCTTTTTGCAAAAAAGACTACGCCACATGCCACTACAGAGTGAGGTCACTGACA
TCGGGCCCTACGCCATATTGTCATGCCACGTCAGCGTCGCCGACGTATACAAACAAGATA
TGCATCGTATTTGCATGTCCGCATCGTATTTGCATGTCCGAGCTAAGTTTGTGCATCACT
TTGATGTGTGCCACAAATTTTAGCACTAAAGTGACCATTTGCGCCAAGTTTTAGCACCAC
CGGGCTAATTGGCTCAAAAACAGGTGTATTGTATTCCATCATACGACATGGATTTACCTC
TTTTCACTAATAACATATTACTACTCCTTTTCTTTGCGAGGATATTACTAGTTCTTCTTC
CTTTCACGTTTATTTGGTCTCCTTTTATTTTGAATCAAAGTTTGACCATACATTTAACAT
AAACGCTTGACATTACACGACTGATAACGCCTTACTCCTTTGCCATCTTTGTGGCCGTTA
GATCCGATTTTGATCGGATGGCTCAAGAGCAACCTCTTCCATAGTCTAGGTTTATGTAGC
TAGGCCAATGTTGCAATCTTCCCCATTGCAACAATTAGTTTGTTGCGGATCGACATAGGA
CAGGCCTGAACCCCTCGAGAGCATGAATTGGAGAGAGACATCTAGGGAAGGGCAGGCTGG
GTGAAGGAGGCGCAAACATGCTCGGAGTTGGTGACATAGAAGTCGAAGGGAGGGCCAACG
AGGTAGAGGAGGCATGGTCCCACTCAAAACGTCGTTAGGCCATGGCTTCGGTAGCAAGGT
GCGGCTCCATGGTCGTGCCGGAGAATAACGTTGGCTCGAGAGGGACGCACCATGGAGAAG
GAAGGAGATCGTGCGGCGGGGCAGTGAGGCAGGCCCGCTTGCGTCGGGGAACGGAGGGCG
GAGCCGGGTGATATTGAGAGCCGGGATAGGCAGCGCTCGTAAGCTTGCTCCTAGCAATCT
CTAGATGGAGGACAGGAAGGAGCAGAACGAGCTGACCTTTGGAGCGTGTCGCATGCCGTT
GATTGAAGAAAAAGGATTTTCCCCCCGCTTTATATTATAAAGCAATCGCACCATGCAACC
CAACAGAATGCAAGGTTCGAAGTTCACCAGAAAAGAAAATTAAGTCTGGCTAGGGTCACA
GCACAACACACGCCCAAAATAAAAGAAAATCAGACTAATCCGGCTCAGGAGGAGGAGGTG
GGGGCGGTGGAGCCAATGAGGCGGCCCCGGTGTGCAGTCTATTGCAGACGAGGCGGCCTC
GGCGGTTGATGTAGTTGAACGTCTTCACGATCTAAATCGCAAGTTGTCCCGCGATCCAAT
CACGNNNNNNNNNNNNNNNNNNNNCACCTCCGTGTTCAGCACAGGTACAGCNNNNNNNNN
NNNNNNNNNNNCTTGATCCAGCAAGTGAGGGTGGAGGGGTATATGAGTTCTTCGACAGCA
CAACGACATGACGGCGAATCCTAGTTACATCTTGTTCGAAGGTTAATGGAGATTCACCTT
TTGGCTGAGGTTGATAGACTGCACTGGAAATTAAGTTTGAATGGAATCTTTTCTGTCAAA
TCTATGTATCTTGATCTAATTGATTCGGGCCCAATCCCAACTTCATTACATATTTGGAAG
GTCGAGGATCATCTTCTCCATCCTGATATGCTATAGTCCATCATGAAGCCCGAGTAGCTT
GGTGGCAGTGACTTTNNNGAACTATGTCAATCACTATCTTATATTGGAAGATCAACTTCC
ACTTGATTCAAGTGATTGCAGTATCGAGACAATCTGAGCACTTTGCTTACCAATTGAGCC
ATTATCGTTCATCTTGTAGGAAAATAACTCGTCGGAGGTCTCATACCTCTCAACGTGGGC
ATGAGCCTGAAATCCCAATTTCAGCTCTTGAAACATCTTATATGTTCCGTGACGTTCCAA
ACGTTTTGGAGCCTTAATTCTAAGTCGTAAAGTATGATGCACTGAACTATCATGTAGTCA
TCAAAACATACATGTTAGTTGTTCTCAACATCCATAGACGATGCTTGGGGGTAGCACACC
GAGCGATGCATTAAGAACATAAGCCTTCTCAACATCCATAGCCGGTGCTTGGGGGAGGAG
TCCTACTCCAACAAGGAATCCCCCCACCCTCCAACTTTTCCTCTTGGGCGCATGGGCCCC
TTATGGGGTTGGCTTCCCAGCCCACCAGGGGCTGGCACACCACCTCTTGGAACCATGTGG
GCCCCGGGGTGGGTGTTCCCTGGCCGGTGGACCCCCAGAACCCATTCGTCACTCCTAGTA
CACTATCGGAAATACCCGAAACCTTTTCGGAACCCAAATATCACTTTCCTATATATATAA
ATCTTTACCTCCGGACCATTCCGGAGCATTCTCGTGACGTACATGATCTTATTCGGGACT
CTGAACAACCTTCGGTCACCAACATACATAACTTAATAATACCGAAACCTCACCGAACCT
TAAGTGTTCGCACTCTGCAGGTTCGAGAACTATGCAGACATGACCGAGTCACTCTCCGGT
CAATAACCAATAGCGGGACCTAGATACCCATATTGGTTCCTATATATTCTACGAAGATAT
TTATCGGTTGAACCTCAATGTCAAGGATTCAGTTAATCCCGTATGTTGTTCCCTTTGTCC
ACCGGTATGTTACTTGACCGAGATTCGAACGTCGGTATCTCCATACCTAGTTGAATCTCG
TTACCTGTAAGTCTCTTTACTCGTTACGTAATACAAGATCTCGTGACTTATTCTTTAGTC
ACATTGCTTGCAAGCTTGTTCTGGTGTTGTACTACCGAGTGAGCCCTGAGATACCTCTCC
ATCACANNNNNNNNNNNNNNNNNNNNNNGATCCATGCTAACTCAACAAACACCCTCGAAA
ATACCTGTCGAGCACCTTTATAGTCATGCAATTACTTTGCGACGTTTGATACACACAAGG
CACTCCTTCGGTGTTAGTGAGTTGTATGATCTCATGGTAAAAGGAACAGTTACTTGACAT
GCAGGAAACAGTAGCAATAAACTAACACGATCATATGCTACGATCATATGCTACGTTCAT
ATTTTGGGTCTTGTCAATCACATCATTCTCCTAATGGTTTGATCAACGAGCTAGCCCATC
AGAGGCTCACTAGGGACAAAGTGTTGTCTATGTTCCCACAAATGTATTTGAGTTTGCAAT
CAATACNNNNNNNNNNNNNNNNNNNNNNNNNTATCATGAACGAGGAAATATGATAATGAC
TAATCTATTATTGCATCTAGGGCATATATTCCCAACATGTTCTACCAAGAGGAGTATTTT
CAATTCTCTAAATGAAGAGTGTTGAGATGAACAATAAGAGAATATGTTGGAGGGCAATTA
TGTTCATGTTTTGGCAATGATCAACGTTAGTGGTTTCTCAGTGCCCTTGCCACAGTTGAT
TTAGACCTTGAGATCTCATGCTTTTATAGGGGTTGAACATTTGATGAAATACATGCATGC
TTGAATCAACCATATGTGCCTGTGTTCAATAATCGACCGGGTACATTTAGTTACCTTCTC
CCACCAACAAATTAAGTACAAGTAGTACACTAAAACAAAGGATCGATCGATACTTCTACT
CACTCTTCAAATCCACAGTAAATGAATCGAATCACATGTGTGGATCTTTGTATATATAAT
CATCTTGGTCTTCTTCTTCTTCAATCAAATCTCAAGTATAACGGGATCCATGGATGGAGG
GATTGATGGCTAGCTACTGACGCTGCTGCCTGCTCCGTGGAGAACGCTACCATCGGAAGT
GTGCCTCATGGTGAGCTTCCCATTGCCGATGATCCCTTTCTTCATCATCGCAACAAACTC
CCCGTAGTCGATCCGACCATCCTGTATTTCAAGCATTCAGATCTCCATCCAAATGTGTAT
AAGCAACAACATAAGATTTGGATTAATGAAGAGAAAAATGGAGGAGACATACATTGTCCT
GGTCGACCTCCCTGATGATGTCGTCGATCCCGACGTCGGCCATGTTGTGGTCGCGGCAGG
CCACCTCCAGTTCGTCGACGGTGATGTACCCGCTGCCGTCCTTGTCGAAGTAGGAGAAGG
CGGCCATGAGGTGCTCCTCACGGTCAAGCTTGTTCATGTGCACGGTGGCGGCGATGAACT
CGTCATAGTCGATGGTGCCGCTACGGTCGACGTCTGCGGCCTCCATGAGGTCCCGCACCT
CAGAGTCCCCCAGCTCCGTCGACCCGTACCGCCGCAGCCCCTCTCGAAGCTCCTCGAATG
TGATGGCGCCACTGCCATCGGCGTCCATGGTCTTGAACATCTCCTTGAGCCCGGCCAACT
CCTCCTCCGATAGACCGCGTGCGATCACACGTAAAGCCATCTTCTTCAAGCGGTTCATGG
CGGAGAACTGCTTGAGGCGGGACAACACGGCTGGGTCCAGCGGCGCATCAGGCGCCTCGC
CATTCTCGATGATCCACGGGTGGCACAGTACCTGCTCAATTTTCACTTTTTATTGAATTG
TTTGAATTGCTTACAACATGTGACTGTCATGTAGTGATAGCAATGTTAGAGCCTAGCTAA
TTTCACTCTATCCATTCCTAGCTAGCCTCCAAAAGCTTTTTCTCAAGTTGCGAAAAAACT
GTTGGAGGATAATAATTGGTTAAAATATTTTGATGCCTTTTGAAATTATTAAAATTCAGT
GAATTTCATCGAGATCTCAGAAAAAGTGAAAACCAATAATTACCTGGTGCGCCGTGAACC
GCTCCGCCGGCGGCGACTTGAGCATCTTTCTGATGAGGTCCTTGGCGCCGTCAGAAATGG
TCGGCCATGGGTCGGAGTCGAAGTCGATGGCGCCCTTGAGCACCGCGTCGAAGATGCCCT
GCTGCGTCTCGGCCCAGAACGGCGGCACGCCGGACAGCAGGATGTAGACGATGACGCCGG
CGGTCCACACGTCGGCCTCGGGGCCGTAGTGCTTGCAGAGCACCTCGGGCGCCACGTAGT
AGGGGCTGCCCACCACGTCGGTGAAGATCTGGCCGGGCTTGAAGAAGACGGAGAGGCCGA
AGTCGATGGCCTTGAGGTTGATCTTCTCGCCCGGTTCCCGTTCGTTATTGCCGGCCGACC
CATTGCTACTATCGCCATTACCTTCCCTGTCTTTCAATAGAAAGTTCTCGGGCTTGAGGT
CGCGGTGCATGACCCCGAGCGAGTGGCATGCCTCGACGACGCCGACGATGACGCGGGCGA
TCTCGGCGGCGCGGCGCTCGGAGAAGTATCCGCGCTGGACGATGCGGTCGAAGAGCTCGC
CGCCCTCGCAGAGCTCCATGACGATGTGCACGTACTGCGCGTCCTCGTACGCGCCCTTGA
TGGTGACGACGCTGGCGTGTCCGGCAAGGTGGTGCATGATCTGGATCTCGCGGCGCACGT
CCTCCACGTCCTCCGGGGTGAGCAGCTTGCGCTTGGCGATGGACTTGCAGGCGAAGGCGG
TGCCCGTGGCGGTCTCGGTGCATAGGTAGGTGGTGCCGAACTGGCCCTGGCCGAGCTTGC
GGCCGAGGGAGTAGAGGTCGCGCAGGGGAGGGGTGTGGTGGCCCAGCACGGCCGTCGGGG
AGGAGAGCTGGTGCTGGTGGCCTGCGCCGCGGCCCATGATGGTGTTGCGGTGCGGCGCGC
GGTCGAGGACGGAGGAGGAGGAGTCGGAGTCCCAGTCGGAGCTGCTGCAGCTGGTGCGGT
AGTGGTAGCGGCCGTCACCGGCGG
