Contig Data
morexGenes
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Map Locations of contig_138325 (3342 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138325

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6916 2 526 bp MLOC_6916.1 Available Available LOC_Os06g40600.1, FRAME:+2, EVALUE:2e-38, 13106.m04222 protein elongation factor, putative, expressed
MLOC_6917 1 1055 bp AK372682 Available Available None





CDS Structure of MLOC_6916






CDS Structure of MLOC_6917






Contig Sequence (3342 bp)

>contig_138325 3342 assembly3_WGSMorex_rbca.fasta
ATGGGAGAATTATTTACCCATATTTTGTTTCTTTCGATTGTTCGTTGCCCCTTGGCGTGT
TCAATAGAAACCGTCACTTGTCGCTGGCTCGCTGCTATATATTGGCTTCATTAAGAGGGT
GTAATGATGCAATAAATATTTGAAGGTGCACATGCAGATTTTGGAGAAAATCCAAGAAGG
CTAACATGGTTCTGTGTAACGCATGGGGAGGTGCCAGGGATAGATGATGACGACGAAGTC
ATGGCGGGGAGATGAGGTGCGGCGACAGCTGGTGGCTTGCTCGCTATGGAGGAGGAGGAG
GAGGAGGTTGTGTAGTATGTGAGTGAGAGGAGTGATTGGTTTTTTTCCTTCAAGAAAAGA
ACAGAAGAGCAACTGCTATGTGGTGACATAAATGTCACATAACCTAACAAGTCATTTTTC
GAGAAAGTACCGACCAAGTGAACTATAGGTACCTACAATTTATAGCTCACTAAGATCATG
GTGTGACTCACATTGCATGATGCAAATGAAGATGAAGACCACATTCTTCGCACTATATAT
ATATATATATGGAATAAAATAAATATCTTAAATTCATCAAATATATCTTGGTTTGTACTC
CCTCTGTCAACTAAAACTAATATAAATATAAGAGCGTGTAGATGTAGATTACTAAAATAG
TGTTCTAAATGCTCTTATATTAGTTTACGGAGGGAGTAATAGATAACTATTTTGATCATT
TCTTTCTATATACACATTGTTCTATTAGATTTTTTATAAACTTACATCATAAGTGAAGTG
GATTAATTGCTTCTCCATTGTTACATGCTGCCATTTCTATACATTTGAAATTTATACATG
CATTATAATTTTACATGAAACCGACAAAAAATATATTCATAGCCCGTGGCAACGCACGTG
TCATTGTGTAGGCGTGTATCAAATTTAATCTTATTGGTTGGGTTCTCCCATCTGTTGTTA
GAGTTGTATGAGTCCCTCCAGCCCACCGATTAAATGTTTCCTGTTGATGTTGAGTTGGTC
ACGTGCCACAAACTTTCCACCAGACCATCAGTTCGTTTCATTCATATTGTATTTCCATTT
TGTGGATTGAACATATCTTACTTTGACATACAGGGTCCTAACATTCTACTGGATGACTCT
CTTTCGGTTGAGGTGGATAAGAACTTGCTAAATGCAGTTAAAGATTCAATTGTTCAAGGG
TAGGCACTCTGTTCTGTTAATTCAAATTTCCTTCAGAATATTTGTGAGTTCCTTAACCAT
TTTATTTACTGCCCTAACCTCAGGTTTCAGTGGGGTGCTAGAGAAGGCCCCTTGTGTGAT
GAACCAATTAGGAATGTGAAGTTCAAGATCCTAAATGCAAATATCGCTCCAGAACCACTG
CACCGTGGTGGCGGCCAAATAATCCCCACAGCTCGTCGGGTTGTCTACTCAGCATTTCTG
ATGGCCAATCCTCGAATTTTTTTGACCGAGCGGCCTGCCCGAACGTTTGAGGAGGGTTTG
AGGGGTCCGGTTGTAGATGTTGTAAGTTCTTCTAGACATATTTCTCTGGACAAACACTTC
ATTGTTGAAGACTGGTTCTTCTAGCTAGAAAGATGATTAAAAAAAAAGCTAAGGTAATGT
TGTTTCATTCATTTTGAATTACTTTTATCAGGGAAAGTCAAATCCCACTGAATCGTCTAA
CCAGGGCTAAACTCCTGTGGAATCAGGTAGTAAATCGTCTGTGCCAGCAAGGATCTTGAT
ATCCAAACCAGTTATTGTGTCGTCCAGAAGTAGTGCTGAAACTGTACTTTGTATCCTATT
GGGTTGTTCAGATGTTTTGTTTTAGAAAGAAAGAAAAAGTAAAGAGGCTGAACCAAAATA
TGTAGGCAACATGTACACAAAACATTGAACACTTTAAGGCAGAGTAGGCATGTCAATATA
CGGCAGCATATCACATCTACACGCTACAGCAGCAGCATGTCAGCAAGAGGAGGAAGCTAA
GATTAACAAGTATCTATTACATCTTTCCCGGGCTGGTGAATCTTGAGCTGCTGAGCGCGT
TCTTCATTAAGTCGAGATGTAGGCGAGTGCGGCAGCTACATCCACCATCTCAGGTCTCTC
GCTGGCAGTTCTTTTGAGGCACATGCGAGCAATGGTGAGTGCCCTGCACAATTCTGTGAT
GCTGTATTGATTTGTAAGCATTTGATCTACCAACGTTCCAAAATCCTTTCTGGCGATCAA
GTTGGCGGCCTGAAATTATACATTAACAAAAGTCACAAAAATTAATCTTCATCGCATACA
GTTTTCCCTTTCTGTTGACCCAATGTAATAAAAGAAGATATGCACGAATCTGTGCTAATC
AAATGGTTAAAAACTACTGATAGAGTAAGTAAAACTTAAGCTTATGATGCTTCTGCTTGC
CAGTTTTCAGAAGCAAATTGAGATCAGAAATCACCACAACGTCCCCTTGCTACAGACTTA
TAGCATTGGGGAGAAGCAAGGACTAGTTCTTCAAAAGAAAAATAAAACGCAGGAAGTGAT
GCTTACCCATTGAACAAGAGTAAGCTCAGCTCCCATTCGATTCTGACCCATTGAATAAGG
GTAAGCCTTTCTTCCTGTGATAACCTCCAGTATAACAACACCAAAGCTGTAAACATCTGA
CTTGGTAGTCAACTGACCGCTCTCAAGATACTCTGGCGCACAATACCAGGTGTACCCACC
ACTCTGCTTGGAACAAAAAAATCTGAAAGTTTTGGATGATATCCCTCGCCAAGCAAAATA
TTCGCGCATTTCACTCCACAGTTTATGACAGGAGGGTTGCAGTTAACATGCAAATGCTTC
AGGCCTTGAGCTGCCCCAGCAAGTATCTTCATCCTTGTATTCCAGTCAAGAGGCTTCTTA
TCAGGGGGAAGATCTGGGAAGATAAGAAAAACAAAACCTAATTCTGGTTAAACAAGCTTC
TGATTATTCGGCAACAGTGTAATGAAGTAGGGAACTATTACACACATGGTAGTTCAGTAC
CGTACCGAAAATGTGAGTTTCCAGGGAACCCAGAGGCATGAATTCATACACTAAAAGCCT
CCGATCATCATCAGCGCAGAAGCCAACAAGCTTGACAAGATTCGGGTGATTCATCTTGCT
CAACACCATAACTTCTGTGCAGAACTCTCTGCTCCCTTGCCATCCCGGGTTGAGGATCTT
TATTGCAACCTGTTGCAGCAACATACAAGCGAATCATATACTACAACATCTCCTGAGCAA
AACAACCTCAGTAAACAATAGCATGGATCGTCGACTACATTAAAAAATCGTGTTATGTCT
CCTCCCATAACCGATGTGGGACTAAACCGAACAGACGATCCG