Map Locations of contig_138324 (10927 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_138324

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6913 4 1885 bp MLOC_6913.1 Available Available LOC_Os09g01690.1, FRAME:+2, EVALUE:3e-44, 13109.m00084 protein expressed protein
MLOC_6915 2 2541 bp None Available Available None
MLOC_6914 1 163 bp MLOC_6914.1 Available Available None





CDS Structure of MLOC_6913






CDS Structure of MLOC_6915






CDS Structure of MLOC_6914






Contig Sequence (10927 bp)

>contig_138324 10927 assembly3_WGSMorex_rbca.fasta
AAAGGGTCAGTCGGGTGAAATATTTTCCCCGAGGGGTCACTCTGTGAGTTCTTTCCCCCG
AGGGGTCATTTTTGTCAATTTTGCCCCTCAAAGGCCACTTTTGGTGCCATGCTATTGCCA
CTACAGGTCAGGGACATGTATGGCTGCAAGTTGTCACATCTCAATGCAAGAAGTTACTGT
ATGCTCGAATTCTGGCAGCCGTTGCTACAAGTCCAGTCGTCGTTGTCTAGCTTTGCAGGT
GGGACATAAAGTGCTTCAAGGCCCTCCATTACTACTGCAAGCACTCGGTGCACAACACAC
TACTACCTCCGTCGCGGTTTAGAAGACACGGTTAAGCTTGCGTGCATTTCCACAACACAC
AAGGTTTAAGACGCATTGCATTTACTCCTAGCAGCTAATTAGTACTCTGTTGTACTAGTA
CTTCTATATGCATCCATAGTGTGAATGTTATTTTTTTAACTCATTTTACAACCAATCAAT
AACCACCTAGGTTCTAGAGAATTTGCATGCACGCCTTCTAAACCGTGACGGAGAGAGTAA
TGTTGATGCTGGGACGGTGCTTTCAACGGTGCTTTCAATGACTGATGACGCGGGTGGTCT
TGCATTGTGGCATGGGAGGCCACGAAGGGTTGCTTTGATGGCGGCTATTTGCATGGGGAT
GCGCGATGTGATGAACTTGGCGAGCGGTTGAGGGTGGTCAGATGGTAATATGACGCTGCG
AGGACGGGATGCAAACGCGTGCATGCAAGATGCAACTGTGAGGTGTGAAAAGAGAAGACG
GCTTGGGATTCTCATCCAAATATCCAACGGCCCCTGGCGGGCTAATCGGGTGGCTGGCGA
GGCGGGTGATCCCGCCGGCTCAGGCGGCCAAATTATATGGACATTTTACGAGGAGTTTTT
TACATGAACTATTGAAGATGCTCTAAGATTGTAGTTTAAACCATGTTTTATGTACGCTAA
GCGTATGTTCCCTTGAAGACTCTTTGGGCAAACTTCGGTGGGGCTTCTTCTTCTGCTCGG
CCTCTAGCCTAGACGAAACTAGCCCTTCGTGTCTTCTTGCTCATATGGATTTGCCTGAGT
AACAATGAAAGGAACAACTAAGTATGTATTATAACTGGACCTGCCCCTAAACCCCCTACC
ACCTCATGGATGAACAAAATGGCAAAAAGAGATGATATTTTTTCATCCAATAAGTCATCT
TCAATGGCGTATTCTGAATCGAACACACTAGACGTCCGTGGAGACAGATACCAAGGCCGG
CCATTTAACCATGTGCACCAAACGTCCGCCTCTTTTTTCTTTTTTCTTTGTCCGAACACT
CAAAATTCTTTATTTTTAGTCGTTGATTGTTTTTTGAGATAGCTAACGTCTTATTTCAAG
TGGTGAACACTCAAAATTCTTACACAGATATAGCATAAATAATACTTCAAGTAGTGCAAA
TATTCAAAAGCAACAGTAGTTCAAATATAAACAAATAATACAATCCAAACATCAAGTGTT
CAAATAAAATAGTTCATACTTGAATTCAACTTGCACATGTTTACTCATTCATTAGTGATA
GTTGAGAACTCATGTTCAGCAAATTAAATGTTAAGTTTCTCAACTCGCACTAATGTGCCT
CCTCGCGTGCCAACCCAACACACATCATCCCGTTCACTCACTCGGTTGGACACGTTGAGG
CAAATCCTATTTGACGCTGCAGGCGTCAAGTGCATTTTTCTTAACCGGCGCGTGCCCAAC
GGGAGGGACATTTTTCGGTTTTGTGAAGTTTCTCAAAGCTTCCTAGATGGGGTTTTTTCA
TTTATATTTTCCTAGGACTGATTTTTCTTCGTTTTTTCTCTTTATATTTTTTTGTTTCTT
TTCTTTACTCTTTTTATTACTTTTTCATTTCCATTTTATTTTTTATATATATTTTTTTTA
AAGCGCAACCTTTTTCTATTAACTTTTTTCAAACGAAAAAACTTTTTTCCAAATCACTGA
ACCCTTTTCAAAAAATTACGAATTTTCTAATTAATATTCTATGAACTGTTCTCAAATTTT
GATGATTTTTTTGGAAATTTGATGAGCTTTTTCTGAAATTGATGAACTTCTTTAAGATTT
GTGAACTTTTTTTCGAGTTGAACGAACTTTTTTCCAATTTCATGAACTAATTTCCAAAAT
CCGTGAATTTTTTTTTATATCACAGTGAATTTTTCGAATGCGTTATATTTTCTTTTAAAA
TTTATGAAGCATTTTTTGCTTTTATAAACTTTTTATGTTCACATTTTGTTCGCTTAACTC
GGCGATTAGGAGCTCCCACGTTAACTAGTTGACCAATTGCTTATTTGACTGTAGACCAGG
TCCACCGCGCGCGGAGAAAATAGCATTATACAACTTATTTTAGGACGGAGAAAATAGCAT
TATACAACTTATTGTTAAAATAAGCCAGAAGTTAAAAGAAAAAACTGATTTAGAAAAAGC
TACCTTATTTTCACCTCGTAGGCAAGTGCAATGGGAAAAAGGTGCTGGCTGGTGGCTTCC
CGCAGGCCGCAGCTTCCCGGAAGTGAATCGAACAGGTATCCGAGAGGGTTATGTTGTTTG
GTGTTAATTACGGCCAAATTGCCACCGCGGAAAAAACTGCTGCTAGCTCCCCGCACCCAA
CTCCCACCTCGCGCGAGCACCTCCCAGACTCACTCACCTACGAGGTGGCTCTGCTCTCTC
CCTAGGGTTCCCCTGCGCCGCCGCCCCGACCTCGGCCCGGTCCAGTCCCTCCCCGCGGCT
CACCCACTCCGGCAACGCCCCCTCCGTCCCCGCGGGCGGCACCCCACCCCTCCCTCCCCT
CGACCCGGTCCGGCGACCCACTCCTCCGCCGCCCCACCACCGTTCCCTCTCCCCTCGTGT
GAGGCAGCAAGGTGAGCAGCTCCTGTGTGGTATTTTTTGGGATTTCTTACAGCAGCTCAT
ACGAAAGAAATAATTTTGATATAGATTGTGTGGATGGTTTCTGCTCCTTGATGCTTAGCT
CTAAGGTGCATGCTTTTGTTGGCAGTATCATGTACTAATAATTTAAAGATATTTTTTATT
CAGTACTTCTTCTCAAGTACTCGTACTCGTACATGAGACAATGATGCATGTATGATATTC
GTATGCGAGACAATGATCCTCCTTTATGTTCGATTATGACATGTTTCAAAGTCGAATTTA
TATTCATATGGGCAACGAAATAATAAATAATAGCGCAGTATCAATTAATCCGAACAAACA
ATATAACCAAAGGGCATTACAGACTTTTCCCTGATCATACCACAAATAAGCTGAGAAAAC
AGGCACTCAAAAGAACTGGCTAGCTTATTATCTGGAGCTTATTCTCACAGCAGCTTATTT
CCACGGGAGCTTATTTCCACAGCTATCGTTCGGTCCTCCTCCACCCAGCCGCCGGCCCGT
CGTCCTCCTCCACGCCCCCACCGGCGGGCCTCCGCCACACTCCCGTCCTGCCCCGTCCGC
AACGGTGACCAGCAGGAGTCTCCTCCCTCCAGTTCCAGGGGCCGCGCCTCTTTCCCTGCT
CAGCTCGACAGCAGTGAAGCGGGCAGGGGTTCCATCCAGCCTGGTTCCTCCTCTCGGCGG
TGTGAAATCCCTAACACTCCACGATTCTTTTCTCTCCGAGCTGCTTCAGGCCGTCCAGGC
GGCGGCGGCGGCCTGGCCTGTCTGCTCTGATAGAAGCTCATTTTCTTTCTGAATACTTTA
GGAATCCCTCAGGCCTTGCACTTTTCATTTAGTTAGCATAGCATGTGAGCTTGAATCAGG
TTGAATTCGGGATGCTTTGCCTTGTTAATGTGATGCCTCCCTTCGTTGATTGTGCACCGC
GCTGCAAATCTTGTATCTCTTGGATACAATTGCAGTTACAATTACAAACCAGGGATCCTG
AATTTCATTATCACATATAGTTTACATCTAGTCCAAAGGTAACCAGGCTTAGGGGACAGA
TAGATAGGGTCACATCTTAGATAGCGTTGATTCATTAGGAGAGGGTATCTGCTTCATCTG
CGTAGGACATGGTCCATGTCTTGATGTGTATTTGCTGGCTCTACTAGCCAGGAAAACTTA
CACATAGTTGCGTTTTACTTTTTCACGAGGTTGGAGGATGGAAAAGTATTACTAGTTGTT
ACTGTACATTCATTTAGTACTTAGATTTGTCATGTTCCGTAGATTCCTCCCTTCCAGTCA
TCACTCTGTTCTTGCTATTTCCAGGTCCATTATGGCATCTGTTATGGTATTGTGAACATG
TCCAACATAAACTTAGAAGAATTCTTATCCCTAGCTCATGCTTCAACATTCTGTTCTATG
CAGGCAGATCCGCAGGTGGAGCTAGTATCAACAATGTCAGATCCTGTTAAGGATAGCAAT
ATGCAGCAGCTAGTCCCAATGGCACCACCCGCAAGGGTTTCTGGTGGCGAACTAGTGGCA
AGGGATTCTGTAGGTGACAGTGGAAAGCAGCTGGCGCTGGTGGAGGGTGGAGGAAAGAGC
TCGGGAGGGGTCAAGCTGCGGGAGGATGAGGAGGACATAGAGGTGAAGCTCAGGCGCATC
ATGGAGAATGTCCCCGTCCGTGCCAGCAACACCTCTGGGTCCTCTGCTGGTTCTGGCTCT
GGTGACTTCCACCAGGTACTGTTTCTCTCTCCCACCCTCTCACAAGTGGAGAATTCAGCG
AAACTAAGTGTCAGATTGAACCATTTTTTTTCCTTATTATGCGGATGAGATCACATATAA
CTCTACATTATGGCTATGATAAAATTTATTTGTCAATTAGCACTTGAGTAGATGCTTGCA
ATATTTTGGTGAAGTAGCCATTTTATTGATTTTTTCTTTAAAGAACTTTTGGGTCTACGG
TTCATCTGAACATGAATTATTGATTCTAAATGGTTGCAATGTTCTGGTGAAGTTGCCATT
TATTGGTTTTTTCTTGAAGAAAATTTAGGGTCTATGGTTCATCTGAACATGAATTATTGA
TTCTAAATAGTTCTTTGGCGTCTATATAAGGAAAAACAAACATGGTGCCTTCGGAAAAAA
AACGCATGTACACAAGACCCTTTACCTGTTGATGTTCTTAAGAATACTGACAGTATTGAA
AGCACTTGAGTAAATTTTGTGTATGCAGTTGGCTATACCAAAACAACAAGATGATTAAAA
CTTGCATGATTCTTGAATATGTAGAATGCAAGTCGTTTTGGATTCTAAGCTATCATTACT
GAATACGAAAAATGAAAAGAATATGTTTTGCTGCATCACTTATCAACGGGGAGGTTATAA
GGCTGACGAATGACCACAGTTTGATAAAAGGTAAAGGTCTGTTAAGTTATGATGTGATAT
AAGAGAAGGGGTCAGATACAAGATCTTTGTATTTTTGGCTTAGCTCATAGGCATTATCGC
TTGATAATCTGAAGTTCCAGTAAGAGTGCTGAAATAGGACGGATGCCAGAATTGCTACCA
GCCTACCAGGAGAAGATTTAGTGCTTTGCTACTCAACTCTTCATTTGAGTCGTTAAAATG
AAGTACTGATGTTGACTTGTGGGCGGAATCCTAGTTTAACTTTAAAACTGCAATTGACTT
GTGTGTGGAGAACTGGAGATTGTCTTGCTGAGACTGTATACACGTTCATTCGAATTCTGC
TCTCTTTGAGGCTCGTGATAATAATAAACTCAAGATATATTTTGTCTGTCATGCTTGTTC
ACCAGAATTATCAAATCCTTGTTTCGGGTGACATCATAGCAGCTGAAATACATGATATTT
GTATTTGATTCCTCCTGTTCCAGCATTCAGAGAGCTAGAGCAAACATTTTCTTGATGTGT
TCTCAACTATCTTATTCACTGATTTCTTTTGTATATACAAATCAGCTAGCTCCAGATTTC
TCAAGTTTTATGATATGAATAATTTTGAGAACTTGAATGGAAACACACTGGTAGTTAATA
ATCTGATGGTTTAACTAACTGTAAGCACTCTTGTTTTTGACAGTATCGGCAAATGAGGAG
AAGAGAACAGGACCGAATAACGAGGATGGAGACTGATTACGAAAAGAGGAAACAGGTGGC
CGAGTTCAACCTGCGGAGGGAGGAGAGGCTAAAAGCAGCCGAGGATCGTACATCCAAGAA
GCGCCTGAAACGCCAAAAGAAGAAGCAGCGCAAGAATGAAAAGCGGGCCAAACCAAGCGG
CGGTGGCGAGGAGCCCAATAGCGAAGCAGTGCCTAAGCAGGTGCAGGAGGAGTCAGACGA
AGACGATGAGGGTTCGGATTACGAGGGTGACGACAAGTTTAAGCAATGCACATGAAGTTG
CTGTTAAACTGCAGACTGCCGTTTCTGGATATTACTTTTCATCACTAGTAGGGATTCTGG
ATGATAAGGAAGACCGGGGGCAATGAACTAACATCAGGCGCTTGTTTTTGTAGTAATGGA
GACTCGGAAACGTACATGCTAGATTGTGGCTGTTAGTGTTTTTGAAAATGCTTGTCTACT
GTAAGATGGCAACCGGATGCCAGTGGATGCGCATTCTCCTGGACGGTAGATGGGGATGGC
GCATTGGCTTCTTGATATGGAATATTATTTGACCTTTTCCAGATGACATGGCCATGCATG
AAACATAGTGTTGGTTTTCTTGTTCTCTGTGCTTGCTTGAGGCCCCTTCTACTAATCACC
TAATGTTTCTTTTTTCGTAAATAGTCTTAAACATAATGTATGAACATTTTGGGATGCACA
ATTCGATCCTGTGAGCATCAGATGAACTGAAGCAGCTGTGACTTTGGTGGGTTTTGTTTA
TTTTGGCATAGATTTTATGTAAGCAGAAGAAATAGCATTTCATGCCCGTGCTTTCGTCAA
CATGCTGGTTATTATTCAACTTGCTTGGTGTTGTAATGGAAACCTCCCACCTTGCTTATC
TTTGAAGATTATTAGCAGGTTATCAGCATATGAAGAGTATATGTGCCAGTTTTTACCTGG
CCCAATTACCTCACATGACAACTTTTCTCAAGAAAAGAAAAAGATCACCAAATTAAACTC
ATTGTTCCACTATCATTAATTCCAAACGTGTAACAAACATAATCCTTACCGATATGCCAT
GCCCTCTCATATTACATCATAGCATCAAAGCATAATCTTACAAGTTGGTAAGGTGGGTAG
GAGAGGAAACAGCAATAGAACACCACCCTCAAAACTGGGGCAAAGAGAGAGGGCTCAGTT
TTGGATGGTGTTTGGCGGTCCTTGGTCTCGTTAGGATACTCCCTCCGATCACTTCTGTAA
GACGTTCTAGACATGACCGTGTTGCACTATTTGAATGCAGCAGCAACAACAGGTGGATCA
CCCCAACCCCCAACCCCCCAAAAAAAGCGAGAGGCAGGCGGGAGATCTACATATTGCCAG
CCAACGAAATAGTGCAAACGGAGCAGCAAGGATTCTTCCAGTTTGATGATTTGCAGGCAG
ACAGGCCAGGAAATAACAGGATCTACTGCATTCGATAACAAGCGACCATATATCAATCAA
CGAGAACAACAGAATTTGCAGCACCTTGATCTTGATCTCGGCCCAACACGGATTAATACA
CGCAAAATTAACTCAACACAATGAAACAAGGGGGAGATTAATATTACCCTAGGCATCTCG
ACCAACCTCATAGAGTGGGCATGCATGGACAGTGGAGAGCTACGAGTGGTGGATTTCCGA
GCAGCACAACTCCAATGCCATGAGAAGAAGAGGCAAAGAGTAGCGTGCCGTTTTGCTCAC
ATAAAATCCCACAACTTCGGTCTAGCTTAATCAGAAAGTAACCAAGTGTCCAACAAACCC
ATTTTTTTAAATGAAAAACATGGTCAGGAAAAACTCCAAGTAGTACTACCCTCCGTCCCG
CGATATAAGAAAAACATGGAGTAGATAACAAATTAGAGGCAGCCAAAACTTGAGCATATC
AACCAACAAAATTGAAAAAAACAGCAGATAAGTTCAGCCATGGCCAACAAAGACGATTTC
AATCACAGGACAATAAGAGAACTGCAGAGACCAACTTACTAATTCAGCCACAGAGAATAT
GCTCACCCAGCTCCGCTCACCAGCCCCAAGGTAATTAAGTAGCCAGCAACATTGCAAAGA
ACCAGGAGTGATGGATCTCCGAGCAGCACAACGACCCAGATGCCATGAGAAACTGAGGCA
TAAGGTAACCTGCCATTTTGCTCGGCTAAAACTCTCAGCTACTTCTACACTAACCGCAAA
TCAGGCAGTAATCAAACAGCAGGAAACAAATAAAAAACATAACTTCGATTTCAGGCTCAT
GTAATACCTTTTTCCCCTTAGGGGGCAGCAAGCAAATAGAAGCTCAATTTGCGTGTAACA
AAAGAAAAAATCCTAAGAACAGAGAAAAAAAATTATAATCAAAACAAGCTACTCCTTCAT
TCAAATACGATAATAAGCAACATTATCTCAACATCAATCAACAAAATCAAGACATCTTCT
ATGCAGATCTGACAAGAATACAGCAGATGCAACCATACAAGCAGAACTCATCGACCAATT
AAACAAGGAGCGAAAATAAATGTTACCCTTAGCCCCTTCCAACCAGCCATGGAAAAAGTG
GCCAGCCAACAATGGAGAACCAGGATGTTAATCTCCGAGCAGCACAACGACTCCAATGCC
ATGAGAAACAGAGGCAAAGGGTAACCTGCCAATTTGCTCGGCTAAACTCACTAGCTGTCC
ATCCAGCCAAACCAGAAAGCAATCAAATAGAGAAGGAACTTTGGTTGCTAGTTCAGTTAA
AATCATTTTCCCAGGAGAAGGCCGATAAGAAAATTGGTGTTTCAAGCGCTCAATGAATTC
GGCAAAAAATATAAACATTTTCCAAGACAGTGCTGGGCAGTCACACAAACATACATATTT
TCCAGGTCAAAGCGAGTCTGAAAGAATTCAAGTACTCCCTTCGATTAATTTGGATCGGAG
GGAGTAATCGATATTAACAGAAGATCCTGACATCACGGCAAAGCATCAATAAACACAAGC
AGTGGGTTCTTTTCTTTACTCTTAGGAACAAGGTAAACATATCACCATACAGGTAACATG
GATGTTACAGTTATGTCATACAAATCGATCTTCAGAATATGAAACATCACAGGCTCTTCC
AGCATGCATACTGCCCAGGCAACATAAAGTGTACAGCAGCATCATTTCATGTACCTATGC
AGAAACTTGCGGTGGAAATCACTTCTGATGGTGTCGTTGATGAACCGTTTCGGTGTCTTA
GTCTCTCCACGAGCTTGGTTCTTGAATACAACATCATCATCCCACCTGCGACAAACACAT
ATATGAGCAGGATTAAGCTCAGCATAAAGCATGGAAGCATTATTTTTTCTTTAAAAAAAG
GCACCACAACATAAAAGAAGCATATAATATGATACACTAGGCATCACTGTCTTAACCTTC
TCTTCACATTGAAGGAGCCAGAGTTATTCATATTAATCAATGGGTTTCCTCGCATCAGCT
CAGCCTCCTTCATCTTGGCCTCTTCTTCTGCTTGCTGACGCTCCTGCAGCAAACAAACGT
GACTTCATATTAATTCTCTAATCCCAAAGAAGAAGAGCGCCTCAAAATGATAATACGGAG
AAGAAAACAACAAACCTTTCTAAACCTGTCCTCAGCTCTTTCTTTTTTAATTCTTTCGAG
CTCTGCCATTAGTGCCTCGGTGTCATCGTCATCATCATCATCGTCGCTGAATAAAAGTTT
CAATTTGATGAGCAAGACATAGAGTAAGTTGAGATAATCAGCTGAACTACGAATCTGGGC
CCAGATAAACAGCTCAGTCCCAAAAAAATATCAATTTCTGCGTTATTCTTTTTTGCTATT
TTACCATATTGTATTGTTGTAAACATCTACTCCCTCCGTTCCTAAATATAAGTCTTTTTA
GAGATTCAACTAAAGACTACATACGGATGTATGTAGNNNNNNNNNNNNNNNTAGATTCAT
TCATTTTGCTCCGTGTGTAGTCCGTAGTGAAATCTCTTAAAAGACTTATATTTAGGAACA
GAGGGAGTACCATGAAAAGCATGCTAGCCAGCATAAGAATGTGTATAACACCCAATACCA
AAGTTTATGGTAGATAACACACATTGAACAGTTTCAGCCCCAATCCAAAATAATACAACT
TATTCATGCAGTTAGAAGATGTATCAGTTAACAGCAAGAGAGTCCCATCGCCATTTTGAA
TGTGTGTGGTTGATAAACTAATGAGCAAAAATTAAACAGACCTTTCATCATCACTTTTGA
GCTCCACGTCAGAGTCGTCTGCATCAATTTCACGTGGAACTATCTTATCCTCATCCCGTT
TTGAACCTGTAATTACCAGAAGAACGAAGTAAATTATTATGCTGCCTTGGAACATAAACA
CTAAACAGCCTTTGCTAAAGCTTCAAGGTTGTCACTGACCTTCTAAGAGCAAGCTCGAAC
TTTTTCGCCGGTCCCTCTCATCTGCAAGAAAAAAGAGGTTGAACTAATCAATCACAGTTC
ACAGGTACTCCTACAAGGCAACGACGAAGGACAAACATCACAGAAGAAAGGATACGGCAA
AGCACTATTGCATAAATGACGAAGGAAGTGCAGATGGACCCGGAGGTATTACCAACATAG
GACTTATCCTTGGATGAGAAGTGCTTGCGTTCACGCTCCTCAAGTTCGTCCCTGAGATTC
CTCTTTTGTACCTCCTCTTGAGTTTGTTGGCCCTCTTTTCTGCACATAAGAAGGGGAAGT
ATTGAGAGGGAGTCGTAATAACTTGGTATAATGTTTGCTATACGAGGTTATTACGATTTA
AGCACCTATATACTTGGTAAAAGGTGGAAGGCTCGGCCTTTCTAGCCTGGTGTTTTGTTC
CACCTTTGCCCCCTTAGTTTCGGCTACCAGTGTTATGTTCCATAATTGAGCGCTCCTAAC
ACGCTCG