morexGenes - Barley RNA-seq Database

Contig contig_138158
Source Contig contig_138158
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_138158 (7849 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_138158

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6836	8	2798 bp	MLOC_6836.2	Available	Available	LOC_Os02g06400.1, FRAME:-2, EVALUE:0.0, 13102.m00704 protein growth regulator related protein, putative, expressed
CDS Structure of MLOC_6836

Contig Sequence (7849 bp)

>contig_138158 7849 assembly3_WGSMorex_rbca.fasta
CAACCGTCTCTCCTTTTTACGAACACGATTACGTGAAGCAGCGCCTTTCCTTATAAACCA
CGCGACGCATCGCTCCGGTAGCGAGGTGGGACTAATAAACGACAGCCCAGGCTGCTGCGC
GCCTTCCCCCTTTGCTCCGCGATCGATTCCCTTCCCTCGCTCGAGACTGAGGCAGGCGGA
GGGCCGGGCCTGAAGGGAAAAACAGCGCTGGCGCGCGCACACACACACTCGTCGATTAAA
AAAATGCAGCAGCTTTTTTACTAGTACGTGGCTAGACCGTGTCAAGAATACAATATCTGG
ATCAAGAAACCGTGCTTGGCAAAGCGTACACAGAAGCATACCGATCATACCGATCTTGGC
AAAGCGTACACAGAAGCATACCGATCTTGGCAAAGTGTACTTGCTGGCTTACTGCCAGTG
GTGCCACACGAACAGAAATCAGAAGGGAAATAAAAGAAACTGAGAACTAGCTAGCTCAAG
AATGCGATGTCTGATTAATCAGCATTTCCTTTTTGGTTTCCCGCGTGGTTTTATCGCACG
ATTAATCATCGGCCAAGAACGCAATATCTGTTTCGAGAAACCCGTGCTTCACCGCTACCG
AATTCTGATCATCTACACACAACACACAAACTTCGGATACCAAGGCCGCAGGAGCACTTG
CTGCTCTGGTAGTAGTGTCAATATGAACAAAATCAGGAGGACATCAAGGAAAAGCACTAT
AGTCCATACTCCATAGCTAGCTTAGCAGCGGCTGTCACTCTACTCGGTCCGTCTCATGCT
CTGCACATGCAGGGGGTGAGGGGGTTCTCCCAGAGGTCGTAGCCGGGGAAGGTGGGCTCG
GGGAGGCCGGCGCGGGCCTGGTGCGAGATCACGACGTCCTCGGCAAAGGAGGCCCAGGCC
AGGTACGGGTCGCCGAGGGACTTGGACATGAGCCCCTTGTCGGGCTTGATGGACTTGAGC
CGGTGGCGCCCGCTGTAGCGCCGCGCCCCCATGATGAGCTTGGCGAAGTTGCCGCCGTGC
GTCATCACGAACACGTCCGACTTTAGGCACACCAGGAAGTCCAGCGCCGCCAGGCTCGTC
ACGTGCTTCCGGAAGTGCTCCATCTCCGCCCCGCTCGCCAGCTCCTCCTTGGTCACCTGC
ATACCGTATACATGCAGGGTTCATGTCTGCCGTTGCAAATGGTGCATTCAGGGAGAAGAA
GGGTAGGAGATGAATATAAGTCTGTTTCGCCCCTCCTCAACTCCAGAAATGGATCCCCGC
TTCGAAACCGGGCATTTAACACAGCTAGACTCTTGATTAACCCCTCCTCGAGTCCAGAAA
TGGATCCCCGCTTCGAAACCGGAGCATTTAACACTGCTAGACTACACTGCTAGACTCTTG
ATTTCTAGACACGGGCAATAGTCGTACGACAATAGTCGGGCAATACTCACCAGGTTGGGG
AACATGTTCCTGAGGGGAGCCATCCTGTTTTTGCCGCCGTACACTTGCCCTGACGCGACG
TATATCTGTGTTTCCCTTGTGTATCCCAGTGCTCTCAGGATCACAGCTATCTCGCCAGGC
TCAAGGGGGCAACGCCCTTCTTTCCTCTTTTTCAATGCTAATGGCCACAGGTGAGATCCA
TTCTGCATGCGGATAACAACATCAAGAACTATCAGAAGGCTATGTTGTCGGCATCACTTT
GATGTTTGATGAGATAACTGCAATTCCAGAACTGTTAAAAAACACGAAATATTTGAGATG
ACCTTAAAGCGCCGTGGCCATTCTTTCTGTCTATAAGCTGCCATCATCGCTTTCTCGTCA
CGTGTTCCAGCAAAATCGCAAAAGGACAGGCCCACCATTCCTTTCTCATATCTCAGATGA
AGGGCCCTTTAGAAGGAGTGGCAATTACTTGATCATCAAATGAGCATTCCCTCAACAATG
AACTACAAAGAGATTGAACAGAAGAGATCCACTGCAGCTTACATGTATGGATTCCCGCTG
GTAGTTCGGTTCCTCATCTTTGTTGCCAACTTATCAGCCATTTCTTCAATATCAGGTAGG
AACTTTAAGGCGTGATAATTAACTCTGCATCTTAGTCGGTTAATCTCCGTCGGAACATTG
TCATACCTGAAATTGAAGGTTTGCACTGTATTTATTTCTGCTGCTCCATGCACATTAGAG
ATTTTGTACAATGTAACTTTTAGAGCACAAGCTAAACCCAAAAAAAAATTAGGTTCTCCT
TAATATAGCATGGAAACTGATTGGGCATTTTGGGTTAAGACAACAAATTTATGAATAATT
GCCACAATATAGTTGTGCATTCAACTGTTGACTTACCCCAACCTGTCAACAAATGGCTTA
ATAGACATTATTGTTTTCTCTTTGATCCTTGGAAGTACATTATCAATGTAAAACTGTGCA
GATGCATACTTTGGGATGTTCTTCACTGTACGCCTGTCATAGACACATTTAAATACTGTT
ATATGCAGAATATATTGACACAAATGTAGTATTTGATCCCTAACACCCGCTATAAGCAGA
ACAGATAATTACAACAAGAAGACAGGTTTACCATGGTGAACATAAGACAAGGTGAGACCG
CAGGTAGTGAAAAGAAGTAAGAGTTCGAACCATTCCTGAATCTACATTTAATTTCATAAG
GAAACAAGCAAAAATGGAAATGTATGTAGATCTGATTCACTTTACTAGGCTTTAAAACTT
CCATTCTATGTGGATAGTGGTTAATTTGAGCAATTTAATCTCTCAGTCTAGTTGTATTAA
TTTTGAGACAGAAACAAGGATGACCTTCGGGATAAACTGCTCCAGATCAGCAGTATACCT
ATGATGATGGACCTCAGTCTAAGGGCGGGCATCAGCCTACTTTCTAACAAAAAAAGTATA
GCTATGATGGACAACACACAAGATTTAAAGTACATCAAGATGGATGTAGTTTTGGACTTC
CCATACTCATTGAGATAAATTCAACGGAATTATAAATAAATGCCACATTTATAGAGGGAG
TACTACCAAGGAAATATTCCTATGAAATAGAGTCCGAAATGAGTTTATAGGAAAAAACTC
TAATGAATTACAATCCTAAAATCAAACAACACACATAGGAAAAATCTAAAAGATAGCAAT
CCTCCAAAATTCATACAAAAATCCTTCAAATCAAATATGCCCTAAGACTCAAGGCAGGGA
GTAAAAGAAAATGCATAACCTACTTTATACTAGTGAAGAGTTCATCTTTTTCTGTGAACC
AGTCAGGGATGTCTCGGACAATTCGTACGTCGTCCTTCAGATAGTTTATAAAATGATCCA
CATCAAAGATATCTTCAAATTTACTGCAGAGGAAACAAATGTTGTTAACAATTCTATATC
TATACCACTATATAGCGTACGAATAACTTGGAATAACAATCATTGAATGAAGCCGATCCG
ACGGTTGAGACATGGCAAATCCGAGTGTTGCTGACCGTTGGATCTTCTTATTACTTCACT
AGATTTTGCCATGTGTACTATCTTGAACGTTGTAGGTTGGGCTAAGCCATATGGACATTT
TGGACAAAATTTAGAGCACACTCTACTTTACTCTAGACTCTTCCATACTCATACTCTCCT
AAAAAAAATACCAAACCATCATTCATTTTTGCTTCGTATTCAAGGCTATGTAACTTCATA
AATCATACTGCCTCCGTTCCTAAATATAAGTCTTTCTAGAAGTTTTACTAGGGAACTACA
TACGGATGTATATAGACATACTTTAGAGATGTATATTCACTCATTTTGTTCCGTATGTAG
TTCCCTAGTGAAATTTCTTAAAAGACTTNNATTTAGGAACGGAGGAAGTATTTATCTTTC
CGGATAGAACAATAACTTTGAGATAGCCAAAAAGACACCTAGACAAAACATGTTCGATAT
ATTTTATGTGATCTTTGCATCTTATACTTCATGCATATGCCCCACAATTCCATTTGCATG
CTATAATTAATACAGTAACAGTACATTTACCTTTGGTTGTAATTTGATTATCTGGGCTCT
CACGTGCTATGCACGTATAACTTACTAGTTAAATACCAATGGCAAATACCATTTATTTAA
CATAGTCGAATTAGGTGATGCTGCAACTAAGAGAATTATGACTCTGCATTATATCCAGTA
TCAATTAGTTCATTCTTATTCAAAAGCCAGTGTGACAGTAAGAAAACTTTAGACCTACAA
AACGTGATATTGTAAATTTTTCCACTTTATAAAATTCATATCGAAACTCCACTCCAGATG
TTAATTCTATATACTAGCTGTTTTCAGTAGTCACTAATTCACCAGTGTAGCATGAAGGAG
GATTTGTCCCTGATTAGGATATCCTATAACAACAATACAATCATTGTTAAGCATGAAGAA
GACCAGTGACTTTCACGAGCAGGTATTTTGATCATTGCAGGAGTGGTACAATAAAAAAAT
TACTTAAGATGAACCCGATACTCAAGACCAGAAGCATATTGGTGTCACATGCCTGCAGAA
AAACTGGCTGATTCTGCCAGAATAACCGTAGTTCATTTTTGAAAAATTCTAGTATGACGC
TATCCTCAGTGAACTGACAATTTGATTAGAATATCTGTGAAGCGGATTTCGTATAATAAG
ACTATCAATTAAAGAACAATATACCAGCAGGGGAATAGACAAGTAGAAGAAGTAACAAGA
GACAGTAGCCTTACGTCTGGTCTTTCCATATTTGGTCCTGCTTCAGAACTGGCAAAATAA
GTGTTGCTTCCATTATCTTAGCAATTGCAACAGCATTACATATCTGCAGAAACATCAAAG
CTTAGAAAGTAACAGACGGGCCAATGTTGTAACTGAAACTCAATTTCAGCTTCTCATTAC
CTCTGCCCACTGCTTAACAAATTGTCATGATCTTCTTAGGCAGGTACATAAATAAGTATT
AAATGACAGGGGAATCTAATTTTATTTCTTAAATAAGAAACAGAAGATCATTGTTAAAGC
ATGCTATAAAAATGAATTATCATAAATGTATTGAAGGTATAGGCTGATTACGCTTAAGCA
ACAACCACCATCATAGGAAAAACAGTTCTCATGTAACAGCGAGACTCAGAACTATGCTTC
AACAGAAAAAAAAAACATTGCACCACTGAAACAAAGATTTAACAATCACACAAGATAAGG
TGAGGAAGGCTGAGAAAAAGTGAAAAACAGGAGTGCATACATACAGCTATTCGTTGCTGG
TTCAGTCCACCTTCGGCATGAATAAAAATATACCCAGAGGTTTTGTTCTCAGGTGGGACA
TCTGCATTATATACAATGATGTAATAATTATCACTTATCAGTGCCCAATCATGAAAGGAA
ACAAATGTTCTATGAAAAATTCAGAAGGTGATTTTTTTTTACCGAAAAGTTTATGTATAT
AACAGAGGGTGCACATCTCTCCACTGACTGAGGTATCCTTTCTTGCAGGGGAACACTATG
GTTCTACGGGGAAATATCACAAAAACATGGCTAGAAGATGTTTTCATAAGAACTGGCATT
GCGCTTTACATAGAAAGTATTCTGTGCTCTGACTCACATTGCTGACAGAAGTCTATGAAT
GAGAAGTGCATTACAATTTTAAACCCACACTAATGTTGGCAATATTTCATAGCAATAAGA
TGCATTCAGTTCCCATACGCTGCCTCATAAATCTGCAACCTTACATGAAAATGAAAGTAT
GGAATTATGGGTCAAAACTGAACTCTCGAAGAACACTGTCATTCAGGTTTTAGCCACCCT
AACAAATTTCACACATCACAGTAAACACTAAGCATACCAAGAGTTTAAATAGTTGCCATA
AATCTAGGTTGTGTAGTTAAGCAATAAGCGACCTCACAGTGACTGAGTACAGCAAGGCTA
AAAGTGAATGGTGCAGCATATGCTACATTTTTTGTCTTTCAAGTAGTGTCAATGCTGGAC
TTGCCTGAGGGCTCGTCGCTTCGACGCTCTGCGCAGGGCTTCCAGGACGCGGTGGCAGCA
CGTGGGTTCTCCCACAGCGAGAGAGGCTCCTTCGTCTGCGCCCAATACAATTGAATTCAC
CAGAACAAAAAAAAATCTCACGTGAACACGAATCGCCAGAATGGTTGCTGAGATCAGGAG
CACTTCACCTGGGGGCAATGTAGCGTGATCCCCTCCTTCTGGCACAAGTAGGGCGTGTTC
TAGGATAAAGAAGCAAAAAATGTAAGTGCTAGCTTGGGATTCTGATGAAACCGAGCGTAG
AGAGAGGGAGAAGGAACTCACGAAGCGGGACCAGAGGGAGGGCGCGGAGAAGAGGGCCGC
GAGCAGGAGGAGCGCGAGGACGGCGAGCAAGATCCGGTAGGAGAGGGAGGCGGTGGGGGT
CCTGGGGTCCTCGAGGGCGAGGAGGGAGCGGAGGGGAGACGGAAGGAGCTGCCTGTGGTG
ATGGTGGTGCGGGGGGAGAAGTGAGGAGCGGTGGGCGTCCTTGCCGTCGTCGTCGCGGCC
GCGGGCGGCGGAGGTGGAAGCGAATGGGGAGGAAGCGGAGGACGCGTCGGAGTCGCGCTT
TGCCGGAGAGTTGGATGCGCGGGCGGCCGCCGCCGCCGTCGAGTGCCGAAGCTCCGCCAT
CGCTTCCGCCGGCGGCGCGGTGCGAGACGAGAGTGGGAGTGTGCCTGTTTCAGCGTGCAG
TCTCAGGACTTCGCTTTCGGTGCGTGACGGTAGTGGGAGCGCACCTGAGTCGATCTCATG
CTTCGATTCTCGATCCGACGGCTGTGAGTGGCCAGTCATCCCTGACTTGCGCAGAGCAAA
TCGTGGACAGAAACCGTCCCTTCCATTTGGCTATTGGCTATGGAAGTTCCACAGCCAATG
TCTTTTTTGTTGAGTTATAAAAGCATCCCAAGTCCGAAAATGCCAAACCGAGGCCGAGCT
TTATATAGGTCTTTATTTAAAAAATTCAAATTTCAAAAAATTTAACTTTATAAAATTCTG
GAAATAAATACACATGTACCAAGATACATAATGTACATGTGTGCAAATCTTCAGGTCAAA
ATACATTAAAATGTGAGCTGCACAAAAAGATAAATTTGGTGTTTTTAACATATATATTGT
TTATTTTTAAAGTCCATGATTTTATTTTTTTGTGCAGCTCGCAATTCAAAGTATTTCATC
CTGAAATTTTTCACACATACACTTTACATACTTGCATGCATGTATATTTATTTTCAGAAT
TTTTTAAACTGAAATTCATGAATTTTGAAAAAAAAAATTCAAAATAAAGGGCTCCATGGA
GCATGGTCTCCAAAATGCCCTACTCCCCCAAGTCCTACAACTTTGTTATATGTGATGATT
TAGTCCAAATTTTGCAAAACTTGACCCCGTCGTCCTATAACTTGTTGTGTATATGATGAT
TTAGTCCTGGACCAATCAGAGACAGCCAACTGACAGCCAAGTGGACGGGGCGGTCGTCGC
CCACACTTTTGCATAAAATCCCCTGCCTTTTTACCCATTTCACTCGTGGTCTCCTCACCG
ACCCTTATCCATCTGAACTAAATTTGTTGGCTCGCGTGTGGATGGTTCCTCCCCTTCTAT
GTGCCCGAGTCGTAGCTCCCCGGCTCACCGCCGTCGTCGCGGCCTCCTCGACGATCCCAT
GCTACTTGTTGCAGGCCGTCTAGATCGTCGACCAGTGGTTCACCATGGCCTTCTCGCTCC
GGTCCATGTGGATGTTGACAAAGTCGGGGTCGGTGTAGTTAAACTGCAGCGACGAAGTGG
GCGCGAATGGAAGGACACCACGGCGTAGAGACGGTGCATGCAAGGCTGCTGACGAGTACG
CATACTGCGAGTAGTTGTACTGGGTGTTGAGGCGGGCGTTGAACGCGGG