Contig Data
morexGenes
Links



Map Locations of contig_138117 (4585 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138117

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6800 1 749 bp AK376513 Available Available None
MLOC_6801 1 1331 bp MLOC_6801.1 Available Available LOC_Os06g51060.1, FRAME:+3, EVALUE:1e-141, 13106.m05495 protein CHIT8 - Chitinase family protein precursor, expressed





CDS Structure of MLOC_6800






CDS Structure of MLOC_6801






Contig Sequence (4585 bp)

>contig_138117 4585 assembly3_WGSMorex_rbca.fasta
GAGACCACCGGCGGGTGGGCGACGGCACCGGACGGAGCTTTCGCCTGGGGCTACTGCTTC
AAGCAGGAGCGTGGCGCCACCTCCAACTACTGCACTCCGAGCGCGCAGTGGCCGTGCGCC
CCAGGGAAGAGCTACTACGGCCGTGGGCCGATCCAGCTCTCCCACAACTACAACTACGGG
CCTGCGGGCCGGGCCATCGGGGTCGACCTCCTGCGCAACCCGGACCTGGTGGCCACGGAC
CCGACCGTGTCGTTTAAGACTGCGATGTGGTTTTGGATGACGGCCCAGGCGCCAAAGCCG
TCGAGCCATGCTGTGATCACGGGCCAGTGGAGCCCATCAGGGACGGACCGGGCAGCGGGC
CGGGTGCCCGGGTTTGGCGTGATCACCAACATCGTCAACGGCGGGATCGAGTGCGGGCAT
GGGCAGGACAGCCGAGTCGCCGACCGGATCGGGTTTTACAAGCGCTACTGCGACATCCTC
GGCGTTGGCTACGGCAACAACCTCGACTGCTACAACCAGAGGCCCTTCGCTTAACTAATT
AGTTATACATAACCCCGCACACAAAATTCAATAAGAGCATCAGAGCATGGGGTAAGTTGT
AACTATGGTTACTTCTCCTGAGAATCTCAATAAACGCATCCAATATAGATGCTTTGGTAT
TGAGGTTTAGAAAAAATATTGGCTCATGCTTTGAGATCAACACTAAATGCTTCTTAAAGA
GTTCAATTATACCTGGCCATCGCTCGGGCTGGGCCGGGATTCGGGTCGGGCTAGACCAAG
CCCGACCTAAAAAACCTAGGCCCGAGCCAGGCCCGGCCCGACCGTCGGGCCTAGATATCA
GGCCCATGCCCGGCCTATCGCTGCTTAATTTCGTCGGGCTTTGGGTCTCGGGCCGGGTCC
CTTCCTTAAAACGCAAAAACAACAAGCCCATGCCCAGGCCTGGCCAATCGCTGCTTAATT
TCGTCGGACTTTGGGCCTTGGGCCGAGCCCCTTCCCTAAAACGCAAAAACAACAAGCCCA
GGCCCGGCCCGACAAACGCTTTGGGATCAAAATTCAGGCCCGAACCCGGCCCATGGGCAA
GGTCGGACCGGGCCGGGCTGCCCATGGCCAGATATATGTTCAATCATGGCAACCGAGATA
CATCTAGGTCTAACTAGGTATAGTGCTTATGTTACCTAGCGATCAGGAGCAGATACGATA
TATATACATATATATGGACTCACTTGCCTTCTTATTCTCTTCAAAATTTTCACCGAGTCA
TCTAAATAATAGTGCTATCGGGTAGCTGGTAAGATGGCAGAATCGTCATTTTTTTTGTGA
GATAGGATCCATAATTTCTTACAATGTTGTATGCTTTGTTATATATAAATCACCCTCCTC
CCCTTGAGCGTCGTCACAGTTTCGTAGAGAGGCGATGGACCAAAAAATTAAGCTAGGGCG
AAATCACCCCCTTCCGCTTGAGCATCGACCGCCTGCTTGGTCGACACCCGCCACCGCCGC
CATGCTTGGTTTGGCCGAGTGCCCTAGTGCTAGGTTTGGCCGTGTGCGTTTCTTTTTGAT
CTGGGTCATGAACTACCTGTGCGAAACAATGCACCTCCTGTCTTGTGGCCCAGCAGCTCG
TGGCCCATATGAACAGGGACACTATTTAGCCTAGCGGACGACTGAGCGGAAAATACATTT
TGATTTGTTGTTGTATATGCATCCTGTATGAGGAATTTTTAACAATTAAACAAAACTCAA
AATAGTACAGAACTATTTTTGGATTAAATTTGACTTTGTTTTACACTAGTATATAAAATT
TCAAAAAAAAACCAACATTGACTTTTGGGCAAAAAAACAAAGTTTATTTGTTATTATAGG
TCACTATTCACACTATTTTGACCAAACAATTTCTTTTTGAAAATTCGTCAAAGTGTAATT
TTCGTTTTGTGGAATTTTTCTCACAAGTACAATGGAAAGCCAAGTTTATTTCAAAAATAT
TTTCAACATTTCTTAACTTTTTGTTGAATTGCTATATATTTTTTTACATATAGGGTGTAT
ATAGACCTGGGAACCAAATGTTCACATCCACAACTGAGCCAGGGAGATGGGACACACACA
CGCACACGCACATAATCTTTTTTGCATAGATTAAGGTATGGCAGGCGCCACACGTTGAGT
TGTTTTGTATGACTTTGTTCTTTGTCAGCGTCCTCTAGTTCTATGTTGGTGTTACTTACA
TGCATCTTAATTACTCCTATGTGTAGACTTGTTGTGCGTGTATCCCCTTGGCGCAATACT
AAAAGTCAATAAAAAGAGAGTAGGGTGTTTTGGAGCTCCCCTATGCAATGCTACAGGCGC
CCATTAACGATCCAGGGGCGTGCAGCGTCACTGGCATGGCCCGGCCCATTAGCGTGCTGC
CCAGCTTTTCTTGATCTGTTTTTTTGTTGACCCAATAGAAAAAAACGCCATGATTTTCTC
TTTGTTATGAAAATAAAAATATGAAATCAAATTTTACAGATTTAAAAAAAAGGTTCATCC
ATTTGAAAAAAAGTTCATATCTTTAGAAAAGGTTCATCAATTTGAAAAAAGTTCACTGAA
ACTGAAAAAAAACTTCATCAAACATTTAAAAAGTTCATTACATTTGAAAAAACGTCATAG
AAATTAAAAAATCCATGTATTTTTAAAAAAAGTTCATTGAACTGGAAAAAAGGTCATAAA
TCTTGAAAAAGTTCATCAATTTGGGAAAAAAATCATCCATTTTTAAAAAGATATTCATCA
AATTCATCCGGTTATGTTGGCAAATACATAACATACATGTTTGTGTGTGTACACAAAAAG
TTTCATTTTTTTTGCATTATAGAAATATGATTTTTGAAAACGGGCACCGTGGTGCCCGTG
CACCGTTTCATATTTTCGTAACTCTAGCTTGTTCCTGGATCGCCCTCCCCGGGGACGTTG
TGACCAGCTATGGCCTCCCCGTCTTCTTTGGCTCGGTGCTATATGTGTTGAAATGGACTA
ACGTGCCAAAAAAAAATATATAATGGGAGGCACACACGTCGTCCATGGACTAAAATTCCA
TATGCGTGCATACTAGCACACGCCCTCGATCATACACGGCCAGCTGCTTGCCGCTGTACG
TACCTCTCGATCGGATCTAAGCCAAGCCGCCAAGTTTGATCCGTTGATCGCATGACGATG
TTGCTCTGGAAGGAAGCTCACGGAGAAGGTAGATGGATAGACACACACAGGTTGATCATG
GCGATCGAGTAGCTAGGGCGACACCTACATATATAAAGACGTGCACTCCCCACCGCTTCT
GCCACACACACACACACCACTACGACAGTAGCGTAAGCGTAACACCGAGTACGTACTGTG
TGCTTTGTTGGCTCGCACAATGAGATCGCTCGCGGTGGTGATGGCCGTGGTAACCACGGT
GGCCATGGCCATCGGCACGGCGCGCGGCAGCGTGTCCTCCATCATCTCGCGCGCACAGTT
CGACCGCATGTTGCTGCACCGCAACGACGGCGCCTGCCAGGCCAAGGGCTTCTACACCTA
CGACGCCTTCGTCGCCGCCGCATCTGCCTTCCCGGGCTTCGGCAGCACCGGCAGCGCCGA
CGCCCAGAAGCGCGAGGTGGCCGCCTTCCTGGCCCAGACCTCCCACGAGACCACCGGCGG
ATGGGCGACGGCACCGGACGGGGCCTTCGCCTGGGGCTACTGCTTCAAGCAGGAACGCGG
CGCCTCCTCCGACTACTGCACCCCGAGCGCACAGTGGCCGTGCGCCCCCGGGAAGCGCTA
CTACGGCCGCGGGCCCATCCAGCTCTCCCACAACTACAACTATGGACCTGCCGGCCGGGC
CATCGGGGTCGATCTGCTGGCCAACCCGGACCTGGTGGCCACGGACGCCACTGTGGCGTT
TAAGACGGCCATCTGGTTCTGGATGACGGCGCAGCCGCCCAAGCCGTCGAGCCATGCTGT
GATCGCCGGCCAGTGGAGCCCGTCAGGGGCTGACCGGGCCGCAGGGCGGGTGCCCGGGTT
TGGTGTGATCACCAACATCATCAATGGTGGGATCGAGTGTGGTCACGGACAGGACAGCCG
TGTCGCCGATCGAATCGGGTTTTACAAGCGCTACTGTGACATCCTCGGCGTTGGCTACGG
CAACAACCTCGACTGCTACAGCCAGAGACCCTTCGCTTAATTAATTAGTTATGTATTAAT
CTTGGCCCTCCATAAAATACAATAAGAGCATCATCTCCTATCTACATGCTGTAAGATGTA
ACTTTCGTTACCTTTTATGGGGAACATAACTAAGGCATCTCGTATAGATGCTTAATTTGC
TACTGAATCTTACCAACAATATTGGCTCTTTGTTTCATATCAACAGTTTATGCCTTTTAA
AGAGTTCAAAAATGACAATACAGATACCTCCGCCTTTATAAGTAGGTATTGTGCCTGTGA
TTTTCTATCAAATATGAACTAAAACCACGTACACCAAGAATTATGGAATGGAGGAAGTAA
CTTGTTTTGTTTAGAACCTAATATCACCCCTCCTTGACCGCTCGGTAGGGGGGACGGCCA
GAGCTAACCCCCCCCCCCCCCCCCC