Map Locations of contig_138111 (5772 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138111

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6795 2 1409 bp AK251322.1 Available Available None





CDS Structure of MLOC_6795






Contig Sequence (5772 bp)

>contig_138111 5772 assembly3_WGSMorex_rbca.fasta
AAGCAAGAATCGCGTAGGCACGCCTGTACAGCTGCATACGCACGTTCAAAAGCCAACAGG
ATCGTCATGGAGGGGTCTTTTCGTGCTGGGATCATCCTGTTGATGCTAAGCTTTAACTAA
ATAGCAGCGCACAACTTTGACATACAATGAACATGCCTTTGTATACTTTAGTATGTAGAG
AAGATGTGATTGAAATTCTCTATTTATATACTCACTGTCTGTTACAACGAATAAAACTGC
TCCTTTATTTATTTATACATGGAGATGCTCGACCTTTTCAGGGATCCAGACAACTCGAAG
AGAGATATATAAGCAGGAAGTAAGTCTGATCAATCAGTTTCCCATGTCCTGGAGCACCTG
CCTCTGTATCCGTTGATAAACGGAGCCAATAGCAGATCGGTCTTCTGACAGTCGCGCGCG
TCCACATATATATAGATACACAACACAACATGGAACAAAAGGGGTGTTTGCATGGCTTAG
ATCGGATATTGACTCCAATCTTGTCTCCTCCCGTCAGGGAGCATCATTAGTTAGATGGGC
CTGCCTTGGGGCACAATCTTGTCCTTGATCCACATGTAAATAGGCACTAGGAAGAAGTAT
GTGGCGCATATTGTTCCAATGAGGAACCGAAAGAAGACGAAGACGGGGTTCACATGTGGC
TTGCTCACATCCTCAACCTTCGGACCAAGCTGTTTAAGATGAATATGTAGGGTAATTAAG
ATGTAAATGTGAATTTGCTAGATCTGCTTGACCAAAACAAATTTGATGCCAACTCCCACG
ATGCCAAATTCATTGAAATTCTAGTCTTGTTCCAGGTTAAAAATCCTTAAATTCGATGAA
ATCCATAGAAAAATGCATCAACATCTACAACATAAAATTAGTTTCACTAGATTCATCATC
GAATATTTTAAACTTGATCAAATTAAACTTTTTTTAACTTATGACAAAGCCAAAACCTCA
ATCAGTGTCAAATGAATGAAGTACCTGCAAGGGGGAGTCTCCACTTTGTGTCTTGATGCC
CGTGACACAACACCCTATGACCAGGCCATGCCTACGGGCACCACGGTACCACTTGGGCCC
GATCCTAGTGAGCTCGACGTCCTTAAACCCTGCCCTCTCGAACCATTTCATGTACTCTTC
CTCCGTGGGGAAGAGCATCCACATGTCAGCGAAGAAGCGAGATAGCCAAAATGTCGGACG
GACGGGGCCTATCATACAAGCCACGCCGTCGGCGGTCAGGACCCTGTAGGCCTCCCTGAT
CCCCCGTTGTGGATCAGGCCAATACTCAATGCTGCCGTGTATATGGAGGCCAAAAACAAG
AACTCAATCATTGGATATATATATATATGTCAACTTAAAGTCTAAGGAGAGGTACTAGAG
GAGATTGTCTATAACCCACCTGCCAGCGGAGACGTATCGGTCGAAGGTGTCGGTGGGGAA
GGGAAGGTCCTCGGCGTCACCCTTCATGATCTTGATGCCCCTTAGGGCCTTCTTCTTTCT
GGCCTTGTCGAGTTGGTGCGGCGACTGGTCGATCAGCGTCACGTTCTCGGGATCGACGTG
CCGGACGACGCCGAGCGTGGTGAACCCAGTGCCACCGCCGACATCGACCACCTTGAGGGC
CCGGCTATGGAGGCGGGCATGCTCCAGGGAGATGTCGCGCATGTCCTCAGTGTACTGGCC
GGGGTTGAAGACATGGTCGTAGCCGAAGGAGATGAAGCTGTAGAACCAGAGGGCCTCCTT
TTTGTGCTGGATCAGCCGGAGTGGCTTGCTGGAACCCATGGCGAAACGTTGCTTGGCAAG
CAAGCGAATGAGTGATGTCTAGGGGAGTGGGATGGCATCTATTTATACCGCTAGTACTCC
TCGTAGAAATAATGGAGGGACTAGTTGCTTTGGCAAGGCCTGCCTAGTACAATAATGGTG
CATTTAATTAGTCTACTAGTTCTGGTAGTAGTAGATACAATTCCTCGGTCTTCAAAACAA
TAATTTCGCCCTAAGTTAAACCTATAGTATAGCCAACTGCTGTCTATATGATGTTATCAT
GTCACACATAATCAGCACTTATAACCACACATATAATAAGGCTAGCTATAAGGTTGCCTA
TAAGATTACTACATTAGTTTTTTCTTTCTTTTTTCTCTATCTCTTTTCGTATTTATTAGA
TTTAACTAGAAGTACCCATATAATTAGGCTCTTGCATGAGTTGAGAGCCCCATTCTTCTT
ACTTTTTCATCTCTCTTTTCTTCAGATAGACAAAAATGACATGTAAGCGGGTTGTAAACC
CACTATTATACTTGCTCTAAGCCTTACTTTGTCCAGGCCTGCCAAGTACAATAATAGTGC
ATTTAGTCCAGTTGGGCTAGATACAATTCCTCCTTTTCAAAACAACAACTTCACCCTAAG
TTAAACCCTGGCTAAATTTACGGAAGGAAAAAATTATACATCCACAATATTCATTCATAC
AAAATATTTGGCAATTTTAATTATGAAGCATGACAACTTTTTTTAGGGTTTTCTCTATAT
GCAAATGTTAGTTGTAAAAACTGTCACGACAATGTAACTCCCTACCACATGGGTAATACC
CCCTTCGTTCTTATATATAAGTCATTTTAGAAAGAGAAAGGTGTTAACAACAACCGGGTG
TCTAGGCACCCTCTATGAACAGCAAAATTAAAAAGATAGAAAAGAGTTTCAAAAAATCTG
AAACTTTGCAACATATAAGATGGTCAAATTTTGTAGGTTCTTACAAGTTTTCATGCCAAA
ATATCATGTAGAGAAAGACATACAAACAAGTTTTAGATTTCAGTGCTAAATGTGCTCAAA
ACTTAAAGTACTAACATGAACCGCTACCTTGAAGAATGGCCCAGCCTTGAACGATACCAA
ACAAATTGGCATTCCTGCTGCAACTCGCGATAGCTATCAGCCAGCGCCCAACCGCCATTA
TTCCAGTTCAACAATTGCCATGGCTCCACACATGCCGTGCACTGGCACACGAGGATTTGA
TGACGACCTGAGAAATGGGGCGTTAGAGCATCTGCAGTCAGGACATGCAAATCCCGTGGT
ACTGATCGGATACTTCTTAAATCATGTTGTTCATATTCATGTATGTCATATCTGGTTCCT
CATATCCATACTAACATGCAACATGCATAAAAAATACATAGATCAATCCACAAACACACA
ATCAGAGAGAGAAATACACATTCCGATCACCAAAAGATCACCGCCAAATGTCCAAAAGGT
CGTCATAGTTCACATAATTCACATAAACGACGAACAAATTTAAGCTAGATTACTAAAAAC
TTGAAAATGCAGACGGAGATGGCGAACATTCACCACTTCCTCGTTGGCCGTTTGCGCTTC
GGATCGCCGGCGCAACTGTAGAAATCGACTACTGGTGGACAATCGTCTGAGTCGTCCGAT
GAGGAGCCGTGGTCGTCATCGTCAGAGGATGACGAGCCCTTTTAGCCGTCGGTCCTCCTT
GTCCTGCTGCCGCTTGAGCTTCGCGAGCCGAGCTACCTCCACCGCTGCCTTCACCGCCTT
GCGCTCGGAATGCTCAATGGCAATCTAGAGCGCATTGGCGTTCTTTTGGCAGAGTCGTCG
CGTTTCCGTCTCCGCGGCCGTAAGCAACCGGCGGTATACCCATTCGAGGAGCCACACGTC
CTCATCAGGCTCCGCCTCCATCTTGCGATGGTGGCGCACAGACTGCTCCGCCTCCCTCCT
CTCCCCTTGCCGATGCCGCTTGCAGCGGGCGGCACACGCCTTTGTTTTAGGCGTGCACGT
CCTGTCCGGTGGGACAGGCACAAGCACCCACCGCTGCCCATGTTGGGGAGGAGCAGCCGG
CGAGGGCAGGGAACAGCATAGGTGAGGCGCGGATTGCGCAGGTCGCCTGTCGAAGTTGTG
CACGTGCCGGGAGGGGCCAGGTCCGGCATCCTAGCTGCGCCGGTGGGGAAGTAGCGAGGT
TGCAGATCCGGAGCTGTCTCCGATCTCCACATTGCACCGCTCCAAGGTGATGCGGTGGGC
AAGCTCACAGTCCGGATCCAAGTCGTCATCGGAGCGGCTCCCGGAGCTCGACATTGCACC
GGATTCGATCGGTACCGGTGCCGGAAGAGGAGAGGAAGGAGCGAGAGAGGAGAGTGAGTG
AGGTAGGGTTTCGGAGCGATGAGCCGGATGTTTTTTTCTATGGGATAACCGTGGAGTCGG
TGGTATGCCGGGCTTTGTCAGGTGGGCGTGTCCGAACCACCCTATATCCACTCCATGTTT
GGACTGGATATAAAGGGTGCCGGTCGATTTATTGGCTGGATCTATTTTTTTATGACCAGT
CAATGATCGGACGGGCATTTGAAAATGTTATGAGGGGTCCGACTAGAGATGCTCTTAGTT
GTGATGGGACTGGACATCAGCATGTGTGTGATACTTGTGTGTCGGCTTTGAGCTTGGCCT
CATATGACCTTGCTCAAAATACAACACACGACGTAATTATTCTTTTCAAAATACAACACA
TATGAGGAGGTATGTGTGTGCGCGCACGCGTGTTGTGAGCATGTCATGTGACTCAGTCGT
ATCGGGTGTGTCATTCCCAAGCCCCTATCTATCTCCTTCTCTGCTACCAGAAGTAGTCTC
CATCTTCTTCCCCTCCGCGCGTAGGAGCGGGCTGTTGCACTCAGCTATTAATAATAATGA
GAAAGGAACACATCACCGGATCCAAGTCTCCGTCCTTCCCTTCATTTTCTGTATTAATAA
TGAGAAAGGAACACGTAACCGCATGGCCCTGAGGGGGGCAAGCGGGGCGCCCCCGTAGTA
GCTGCGTTGACAACGGCAACGGCTGTGCACGGCAGCTGCAAGCAGGCCTGGGCCACCCAT
GCATATGTTGCACTTGTGGCGCTACTAATTCGCGATTTTTTTCGAAAGGATCGCTAGTTG
CCTAATTCACTTGATCTAATCAACAATCTAAGATGACTCAAGGTCGAGGCTTATCTCCAT
CTTCCCAGTTAACTTTGCGTGTGCGTCGCCTCGACGAACTTGTTTTATCTAAAATTACTA
ATTGTTCTTTAATTTTGACGCCGTCGCATCATCTAAAAAGTTTGCATCCGGTGGTCAGAA
AGTACGAGAGAAAACATACATGGTTAATTCGTTGATAGAATCACATACATAATCTATCAA
AAGATTTCTTAAGTGAAACTTTATGCATTGAGAAAAAATATATAAGATAATGTCAATATT
GGTACGACCACCAGCAATTTTGCTTCTTGGATTGTTAGAAGAAATATTTCTAGGTAACAT
TTACAAATTAATTGACAGGTGTATATTGCATTTGGACTCACTTGCAATTCATATATGCAT
ACTGCTTACTCGTAGAAATAAAATATACTACTTGATTATTGGTTCGGTGTCTATATTAAG
GGGCATGTTACGCGTCGTCCGACGGATCTTTAAAAAAGATCCGTCACCTCACAAGCCGTT
GATTGTGTGATATGAGCCGTCAGTTTCTCTGCACTACTTTCCTGCAACAATACTTTTGTT
GCAAAAACTTCTCTTCTTAATTTTCTACAACAAATCCTTTGTTGCAAAAAAAATCTCCTA
TTTTCTGCAACAAGTCCTGTGTTGCAAAACCTCTTATTCCCAAATTTTTTGCAACAAGAT
CCTTGTTACAAAAATTAAAAACACGTCCCCCACCGCGTATATCCATCACCACGATAATAG
TCAGATGTCCACGCGCACAGTCATCCGCAACCATCCGATCTAATTCCTGGCATGCAGCTC
AGTCGTCATATT