| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_138102
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6791 |
5 |
2287 bp |
MLOC_6791.2 |
Available |
Available |
LOC_Os12g06260.1, FRAME:-2, EVALUE:8e-105, 13112.m00638 protein harpin-induced protein 1 domain containing protein, expressed |
CDS Structure of MLOC_6791
Contig Sequence (9999 bp)
>contig_138102 9999 assembly3_WGSMorex_rbca.fasta
GATTCGGTGTCAACCAACACGAGATCATTGATATTACTTGCGATGACGTGGCATCATTAG
CACAGGATCAGTGTCGCTTAATTACAATCATTACTGTAGCAAAAGTCGAGGATGTCACAG
TAAGGTGTTTGTCTAGCGCACCAAGAGCACATTAGAGACGTGTCATTTGGATTCCGTTTT
GTTGGTGACGCTGGCGTTGAAGGGGAGGAAGAATTCCTTTGAGTGACAATTTTACAAGTC
GTTGAAATGGTTCACATTGGAAATCGTTTTCTACTGATTATAGTATATCTATTTTTCTCT
TTATCCATCTTCATTGTTAAGAGTTACAAGTTAACATGATACAATCATTTTTCCTCAGTG
CAACCATGTCCGAACAAGATTTAGTGTTAATTCATGATTTCTTATACATGGAACCATACT
ATGGACATTATTGAACTAAAGTATTTTACCTGTAAAATAATTTGATATTTATATAAGTAG
TTTATGGTTATAATTATAAGAAAAGGATAATCTATACAGAATTCCATAGATGGTAGTACT
AATAGAACACAAATAAGTTGCTACCACCATAAATCTTCCTACCAAACAAGATAGAAGAGT
ATATCAAAATTCATAAGCAGCTTAAGTATATCATGTGTGACAAATAGACATTGCTTCATG
GTCAGATGCACATGTTTTTGTCTTGGTGCACGATTGCTATAGTTACCTACTTACTTGCAC
CATCATAATGTTTTATCTCTATCCTGGCAAAAAAATCTATTTGTAGTGATTTTCATTCAA
GCTGACACATTGCACCTCCGTTTGGTTCTTCCAGCACTCAGTTTTGGTAGGATCAATTGA
ATATCCTACCATTGCCATTGACAACAGGATTGCATCAATTCTGACTCAGACTGAGGAGCA
AAAAGAGTGGCATTCCAATAGGTGCTAGGGCGGTGATACGAAGAAAGCAACCATAGAGGT
AGTGCCAAAAGCAGAGCAAAGCCTGGATTAACATGGAAACCAGATCATGGATTAGACAAC
CCCATGCCATTTCATTAAGAAGAGAAGTGTGTACGCAACCAACCAAGCATGCGAGTACTG
GAGCTCAAATTTGGGCGGATTTACACGTATCAGTCGCTGATCATACTGGTGCAACCACGG
TCCACAAGAAGTTTTTTGGCTTCAATAAGTGTCCCATGAATTTAAAGGTTATTTGGATTT
TGCACATTTTGAGGCTATTGCGGGTTTTAAAGGAGGACTTGGTGTGTCCAGTATTCTATA
AGCATGTTTATTTGCTCATCATTTTTCTCAATAATTGGCTAACTAATTTCTAGACGGGAA
AACAAGCCATTTGACGTCAATGGTTTTTTTAAACTTCAATTCAGCTTGTTTGGTAATATT
CCTTGCATGTCTATATTCAGGGACCATAGTGTGAGTTTTTGAAAGAAATAAAAAACTAGA
TATTTTTGTTGTGTACATCTTTATAGTATTTCTACCATCTTTTTGTCAAAATGGACGGGC
GCGACAATGCGCGCCATGAGTGATCTAGTAAGACATTTAAGTCTAAACCACTTTCTATGC
ATAGGAACCTGGTAATAAAATAAAGCACTAAGGCACAAAGCATCTTGCATAGGAATGCAA
AACTAGTGCAACTTTAAAAAATTCAACATAAAGAGTGAAAACTTAATATCGCTAAGATAT
TTATAGCCCTGTATCCCTCTCTTGTAATATTTCTTAGTGGCATCATGATGAAATTCAATA
ATATAGGTACACATCATCCTTCCTTTTCATGGTACACATGCATAAAAGTATTATTAATAC
CCACATAAGTAAATCCTTCTCATTGGTTATAGTTGTAGTAAAATTACTATAGCAATCACG
CAAGACTTGAACAATACAAACTAATTGTACAATATAGTATTAAGTAGACGTTTATTTCTC
CTCATAACCATGACACATTTCATAAGGATGATCATCTTTATTCTTTCTAGCATAAGTATC
ATCATAGATACTAACTTTGTTCTCATCATAGTTAACTAAAATATCCTCCAAATCCACTTC
CATTAATGCTATAATAAGATTCAACCCTCTTAGAAATAGTGGCATCACTATTAACTAAAG
TCATGACCTCTCCAACCCCGCTTCCATTATCATTGTAATAATCATATATAGGAGGCAGAT
TCTCATTATACTAAGATTTACTCTCCTCGCTAGGATCAAGAGGTAGTTAATATTCATCAA
ACCTCTCATCCCTAGTATTATTTATTTGCATATCATTACCACACTTTATAATAATCGAAT
ACATACTAACAACATTGCAATCATGATTAATATTCAAGGAACATACACCAAAAGAATTTT
GTATTCTTCTTTGAATACATCAATACCATATGCAGATTCCATGTTTTCAATATATTTTAA
AAAATCAAGTATAATACTTTTATTGTTGTTTTATTTCATAAGGCTTACGAGTGAACAAGA
AGCTAAAAGATTCAATTATAACATCTAAAGAGGATACCTTCAAGCACTCGGTTATGTGGC
AACGATGCTATAAACAATTTGATGTCTACTACACACTTCTATCTTGTGGAATTTTGATCC
TTGAAGCATAGAGGATTGTAGGGAAACAAGAGATTTCTCAAAAGTGGATGACCCAAGATT
TATCAATCCTGGGAGGCATAGGCTGAAAGTGTTCTCTCTTAATCGACCTTGCAATCAAAT
ACAAGTAGTCACTTGTGACCCCAACACACCCATTACAATTGTTAATTGTATAGATGCAGT
GATTCAATGAAGATGTTGATACTTAGGGTCATGACAAAAAGTTTGGATGGTCATAATATT
CTTTATATTTTGGAAAAAATAGGGTAGCAAGCTAAATAATATTAAAAATTTAAAAGTGAG
TAAAACTATGTCTTCGTCCTTCGAAACAAGACCTAGGGTTCATACTTTCACTAGTGCCAA
CACTCAAAATCACTAATGTAGCCAAAACACATGATATATTCTCAAAGAAGTGTGGTAAAT
AATTTTTTCATGGTTTTTCTTTTACTTGATCAAAGTGGGATGAGAAAACATTGGTATGTC
TAAGCACACCTTTAAGTTCATCTATCTAATTAATCTTGATCCATAGGGCATCCCCATTAA
TTTCACGTGAGTCAATCCCAAAAATTATACTAAACATCACCTCTCATTCTTTATCGCTCT
AATCTTTATGAGTCAACCCATTATCACCTTGGGTGTCTACATTGGTTATAATCGACATGC
ATCATGATCTCATTGATTCTTAACATATTCAATCAAACACAAATTACTCATAGATGAGGA
ATATTCAATTCAACATAAACATACTAGTAGCGATGCATCTCATAATTTAACTTTATGAAC
ACATAGCTACTCGTGCAAACCCTCAGGCCCGAAGCTGGAGTACTCCTGGATCATCATAGG
AGAAACAAAGGATGATGGAGAGGTCTATGAAGATACCCCCCCCCCTCTGTCATGATGCCA
AAACATGGATAAATCAAAGGTCACCTAGATCGGGATGTGGCGGTCGCGGAAAAATCATGG
TAAACATCAATGGAAAAAACATTCATCGAGCATACAAAGAGGCAGGTGCGCTGAGATGCG
GTGGAGAGAAGGTTAAGGGACCCCAATGCCCCCTCTTATTCAAGTGAATAGGTCGTGTGG
GCAACTGGTGGGTCCCCTCGAGTTGGGCTTTTTTCCTAGCGGCTCTCTTGGCTTGAAATT
GAGCGTCGTGTTTTTATTTTCTTTATTTTTTCTCAAGGAAAATATTTTCTGCAAATTTCA
AACTAGGTAAAAAAACCTAACCAAAATTGGACACCGAAATAATAGGTTCGTGCACAAAAT
GATGAAAATTGATGCCAAAGCTACGCACTAATGATACAAATATAGCAAGAAACAAGAAAT
CAAATTACATATACGCTCAAGACATATCAATCACCCCAAGCAAGGCTACAAAGGGGATTT
ACCAATCTCATAAATTATCAAAAGTGTTGTTAAATTTGGTTTGGTGTGTTCAAAGGGTGA
ACCTTACAGTCTAGAAGAAGTGCTCGGTAATACTCAATGGGAGAAAGCCATGGAACAAGA
ATATATGGCACTTCACAAAAATTAAACATGGCAATTGGTTCCTTGTCACGAGGGTAAAAA
TTTGATTGATTGCTAATGGGTGTTTATGATCAAAAAAAATTCTGATGGGACAATAGACCA
CTATAAAGCAAGACTTGCACCCAACGAATTCAAGCAAAGGTATGGTGTAGGTTATGAGCA
CACTTTCAGTCAAGTATGTTACACTATCACCATTTGCGTTTTATTGTCTATTATTGTATC
CAGAGGCTTAGAACTTCATGGTGATCTGGAAGAGGAATGTACAAGAAGCAACCACCTGGG
CTTGAGGAGTAGAAAACACCCTTTCATGTATGTAAGCTTGATAAAGCTTTTGTATCATAT
GAAGCAACTCATAGGACATGATACTTGCGTCTGAGTGTAAAACTGAAAGCTCATAGGGCA
TGACAAATGCTTCAGACTCGTTGTGATCTTCTCTTGAGGGCGTTCGAAAATCATCCAATG
GTAAATAAACATAAACTAAGATAAACTGTATCTTTTTCTCTATATCGACGAGATTGCTCC
CTCGCACGCGCGCCCAAACGAACATGTGTGGAGTGTCATTCCATTTCCATTTCCTTTTGT
TCAGACAACAGGGTCATGAGTGGGACCCATCACATGCCCATCGAGTCAACGTGTGGAGGG
TGCACCGGAGGCTACCTGTCGCATGCAAGGGATCTTTTGCCCTCCCCTAAGGTCCTTCCC
TATGCTCCACCTAGTACATGTGCTAAGCTTTTGAACTCGTCAAAAAATCTCATGTGGCAC
AAAAAAGAGTTTGGGGACTCGAGGAAGATAGACGGTGCACACGTGTGCCTAGACAAAAGC
ACAATTTACTGTCTACAACTCATTAAATGAAAGAATCTTAGCAACAAGAAGCTAAGCACT
AACACATTGAAGAGTTCAGTTTCTAAGCTCTTCCATGCACTTCTCATCTCATATAAGCAC
GTGTGCACTGGGGGAGGCCTAATCCCCCCACCCGCCAATTTAACTCGCAGGCCAAGTGTA
TTCCTCATTCAAGCAGATCCCCACCATAGCGTGCGGGGGCGGGGGGTTGTTTGGGGTTAT
GTTTTAGTTTCTGAAACTTGATAGTTTTGTCGCTCGTTCGTACCAACTTTCAGCGGATGA
AACTTAATCAAATGTATTCAGAAGTGACCTTATTTCAAAGCCCTCGTTGTAAAGAACATG
AATGTGTAAACGAAATTGAATTTAGACCTTTGATTCAAAAGTAAAAAAATTCAAAATCAA
ATGATAAAAAGAAAAATGAGGTATGTGCCCCACGTCTGCGTGCCACAATTTTTTTCTCCC
CATATCATCATATGTACTCCTATGTTGCAATGGACAAGTCAATGGCACCAAACGAAACTA
GCTAGCTAGCACGAGAATACAACCGGAGGAAGCAACCAAAAGGAAAGTGGGAGTGATCAC
AAACTGCACATGCATGCTTAGCTTCCAATCCATCTTTCTCTGTGTCCTTCCATTTATCTT
CTTAAGCAATACTCGTACAAAGGTTTTCAGGCATCTCGGATCGAATCATCTCCACTGTCA
TCTCACATCTTTCTGAAGGCACATATACCATTTTAAATAATATGCGGTCAGTGCTCCATT
AATATTCTGCCGAAAGGCACATGTTTCCTTCTCTCCCCAAAGCAAGTGAATCCTTATCAT
TTCAACGGGACATGGGCCACACCCACAAAGAAGCCACTATATCAGCATCTGTCGTGTAAA
GTCATGCATCGAAACTTCAGAAAGAAAATACAGTACTACTTTACAAGAAAGATGGCGACT
CCAAGTAATATATTCTGCAATCTTTTCAGAAAGTCACATGTGTAAATTCAGTTCCATGAC
CTGATGTAAATCTACATATCGACTGTAATTATTCGACTGTTAAACCAGTGATGACTCGGC
GACCAGGCAGCAAGCCTGGTAAGCAGTCATAAAAGGAACAAAAAAAACTAGTGACTCAGT
TGTATGCAATGGAGTAGTAACTGATTAGAAAGTCAGCGGATGCCAGCGCATCATTGGCAA
TTGCCACATAATAAGGATTAAAGAAACAAAACGGTTTCCGCAAACTAACATTTGTGTTCC
CAATGTTTCTTATGATCAAACTCCATGTGTGTGAGAGCGACTATCCAACTACTTTTTGTT
CTTGGACATGGGATCACAAACACAGAGTCCCCATTTGTACTTTCTCCGAAGCTTCACCAA
ATCGGAGACAATGGGAGAGCTGCCTAGGACCGGGTTGTTGCCACCAAATCACCAAACAGA
ACTCCAGAATTCTGGTACAGTACTAGTACTACAGTTATCAAACATGAAACAACTCATGTG
CATCCTCCCATGATTATACTCCCTCTGTGAATTAATATAAAGACGTTTACATCACTAAAA
GAATGATTTAAAGACGTTTACATCACTAAAAGAATGATTTAAATGTTTTTATATTAATTT
ACAGAGGGAGTAAATGGTAAACCGTGGACCTCTGCTTTACACTTACAACCCCACATATAA
TAGTGTAATTATTACCACCGATCGATCTGTGCCTCTGCGGTCACTATGGTACACAAGCCA
AGAAGAAACCTACCTCTCGCCGGCGACTGGACCCCTGGAGCTAGCTGTGATAAACTAGAC
CTCTACGTGGCAGTAAGTGGTCGTCTGGAACTTGAACCCACTAGCCCCTGGTGCGCCGTT
GCCGCCGCTGGTGACGAGGAAGGCAGGGCAGGTGACGAAGAGGTGGTAGTGGCCAGAGAT
CCAGCTGCCGACCTTCCACCTGACGCGGCCGTCGATCTTGACCTGGAGGATGAGGTAGCC
CGCCTGGCAGTCCTGGGAGATGGCGCTGGCGAGGTAGGGTGCGAAGGGCACGTTGGGCCC
GTCGAGCACCGGCGACCATACGTCGACGTCGCCGTGGCCCTGGTAGACCGGCGGGAGCGA
GGCGGCGACAGTGATCTGTTGGTATTTGTAGGAGGCGTAGACGTCGAGGCGGTCGTAGTA
GACACCAACCCGGTCGTTGGGGTTGCGGGAGGCAACGGTGACCTGGAGGGAGGTGGACAG
GAGGCCCGAGGAGTTGGAGAGGTTGAGCTGCCGGAGGGAGGCGTCCTGGAGGAAAAAGCG
CGGGTGGGTGGGGCGGAGCACCAGGTAGACGATGAGGGCGATGATGGCGACGATGAACGC
CAGGCCCAGGAGCACGGCCAGGAGGCGCCGGCAGCCGTTCCGGAGGTGGTCGTCGCCGTG
GTTGCCGCAGTCCTTGCCCATGGCTAGCTGGCTGCTTTGATCAGTTGGTTCGCGTGTGAT
TTGGTTGTGTCTCCGATGAGTTCTTATTCTGAGTGGTTCAGAGGTGTAGTGGGAGGACCG
GAGGAGATGGTCTGGTGCGGGGCCTGTGGTGTTTGGGAAGCAGGGTAGATTGAGCTTACG
GGTCACACCATTAATAGGCTCTCTCCCCTCAATCCCACGGTCACGGTGGGGCCCGCCCAG
CGACGTGCCTGCTAATTCTCGTTAGACGACCATAACGTAAACCTACTCTTTATTTATTTA
TTTATTTTCCTTAGCATCTTGAACCTCTTTGGAGCTTAGTAGGCACAGTGTGCGCAGGCA
GGACGGATTAGAAAAGCAGAGTTGGCACGCAGAGGTTGATGGATGGTGTTAGCATAATTT
AGTCGTTTCCATATAACTAAATAAATGCAAAGGCGCATAGTTGCTTTAGCATGGCATGGT
AGTATTTGTTGGCTGCCAGGGTAGTTTTTTCCTCGTTGTGTGTTAGCAATCACCACGGAA
AATGGACTGTGCGAGCTGTAGCGTAGTTGTAGGCCGTCGTGGGCATGTGGTTACTCGTAG
GGTGTCATGGTTCGGTGGAAGTGTGTGCACCACAACGACATTTGCTTGGTTTTTGAATAA
ACGTAATGAAGAAGAAGAAAAAGCAGCAAGACTTGCGTTGCGCAAATACTCTCTCTGGTT
GAACTTTGATCCTGAGAGACCATAAGTGGCATCACAGCCATGTGAGACACTCTTGCAGTC
GTCAATCGTTCACAGACTCCCCCGTGTTTTCATGCGGCGCCCCAGTATCCGGATCAGAGT
AGGACCCGTCGATGTGGCGGCGAAGTAGTGGTGCAAGAGGCGAGCTCAAGCGACGCCCTC
CCAGTGTTGACGCGCACCAATTACGTCGACTAGGCGCTACAGATGAAGGTGTAACTCCAA
GTCCATGGCTAGTGTAGGTCTTCACGTCTTGGACCGGCTCGTGCCACGACAAGCGCAATG
CCGTAATCATGATTCTCCATTGTCTGTCGTCGGATGTGCTGATCGCCATTGGTGAAAAGG
AGAACGCTAAGGCCGCTTGGGATGGCATCTCCATGCAGAGCGCGAGCACGAGTCGGCTTC
ACGTGGTCAATGCGCAGAAGTTGCACCGTGATTTCGAGGGCATCAACTTCTGAGACAGCT
AGATGATCAACGAATTCTAGCTCCGCCTCTCATTTACCGTCACCAACCTGCATGCGCTTG
GTGACACTCTCGAGGAATCCAAGTTGTTCGCTAAGTTCCTCCATGTTGTGCTACCTTAGT
TTGTGGAGGTCACCATCACCATCTAGACGTTGCTGGATGTGAGCACGTTGTCCCTCGACG
AGGTCATCAGGCGGCTACGCGTTGTTTAGGACCACCTCGACAATGTCAGCAATGGAGGCA
GCAATCAGGGGGATTGTCTGCTCCTCGGGAAGGAGTGGGAGCCCCCCAGCAGCAACCCCA
TGGAAACAGAGGCCCATCGTCTGGCGGACGCAAAAACCGTCGGAGGGGTGGTGGACGTGT
CGGCAGCGGCTATCGGGAAGTCGGCCCTGTCGACAAGAGTGGTGGCGACAAGGATAAGCG
TCGCTACTATGGCATCAAGGGTCGACACTAGGCCCATGACAGCATGAAGAAATAGTGGGA
CGAGGCACTCCTGGCCAAGGTGGACGACAACACTGGCACACATCTGCTGGTCACCTAAGT
GGTGGAAATCTCTTCCATCACAACCATTTTTTGCCATGGCCGTGTTTTCTAGCCCTCCCT
AAGCCACAAGTGAAACGACTGCCATGGCAGAATTGGCTGCCAAGGTAGTGGGTTTGAGCA
ACCCTGAGCAGTGATGGAGCAGAAACTCATCAGCACCCTCGTTAGGGTGCCAAGCGCAGA
CGAAATACCAAAGTGGAGCCCACACACATAAGTTTCCAGGGTTGGGCCTCGGTAGGAGTA
ATGCCCTACATCCTGCTTGCTACTGTTATTCATCCTGGGTATACCTCATGCAAGAGATTA
CAATGCAATGGAGGTGGAAACCAAGAGTTTCTTCTATCATAATAGATCTATGACAGAGCT
CCTTTGCCCTCCCTAATATGTACGAAGAGATCTAGGGTTATAGGTAAAGGGAGAACCGAT
GTAGCCTGTCGTTAGCTTGAATTAGACACCTGGATAGTCCTAGAGATACCCATGGTTGTC
CTTTTTTTCTTTCCATTCTCGGTGGGTCTCATGGTTACTTTTCCACGTCGGTTGTCGGGC
TCCCTCATACGTCCATTCACTACTAGGGAAAACCTTATACACAGAACATTAGCAGTAGCA
CTGGATAAAAGAGGGCGCTACTGCTATATATTAGTAGTGCGCGTCTACTAGAGTCGCTAT
TGCTAAATACTTAACAGTAGCGCTGTTTTAAGAAACACGCTACTACAAATATTGCCCCGC
CGTTTCTGACAGGCTAGATTTAGTAGTAGCGCGCCCCAGATTCCGGCGCTACTGCTAACA
GAATAGTAGTAGCGCGTGTTTCCGACCCGCGCTACTGCTAAGTGGGGCGTGCACCTATCG
TCTTCGTCACCCCCACACGCCCCTCTCTCTCACTCTCTCCTCTCTCTCTCCACACACTGT
GCCGCCGCCGCAGCCCCTCGCTCTCTCCCTCTCCACTCT
