Contig Data
morexGenes
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Map Locations of contig_138095 (3914 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_138095

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6787 3 1238 bp MLOC_6787.1 Available Available LOC_Os03g15960.1, FRAME:+2, EVALUE:3e-61, 13103.m01885 protein hsp20/alpha crystallin family protein, putative, expressed





CDS Structure of MLOC_6787






Contig Sequence (3914 bp)

>contig_138095 3914 assembly3_WGSMorex_rbca.fasta
CATGCTTGGGTGGAATAGATCTAATTTTTAGAGAATCAATCTCAAGAGAAATTATATCAA
AGTTCCTAGCCAAATAATGCTTGGGCGTGTTCCAGCGGCAGTGGACGGACGAGGAGGAGC
TGCTCATCCTGCGCGGGTTCCTCGAGTTCACGAGGGTGTCATGTACGGCATCGCACGCCA
CATCTGGCGTCCGGCCTTTAAGCGCGACGATGAGCACCGCGACGGCCTGAGCTGGTGGCC
TCACCGGTGAGCATCATGGCGACCTGCGCTGATGGCCTCGTCGGTGAGCTCCGCGGCGGC
CTGCATCGGTGGCTTCGTCGCTGCGGTTTTGGAGGAAATGCGACGCGGTGGTTGTGGAGG
AAGTGCGGGTCGCTGATAGATGGCACCAGGGCAGACATGAGAGGGGAGGAGCGGACGAGG
GCGGGAGCGCCTAGTTTTTTCGCCGCGGACCCATTTATGGCTCATTTTTGCGCCCAGTTT
GGGTTGGGATGGACAACAAGTGGACATCAAGTGGACACGTCCGTCCATTTGGGTCGCTCG
GTTGGGCCAAGTTTTCTATCCGGATGACCCAAACGAACAATATGAATCGCCCGGTTGGAG
TTGTTCTAAGACTGAGATATATAAATAAAATCTATTACTAAAAAAATATTAGAATCATCA
ACATGCAGTTCCCGGATGATGTAATATCTAAGGACAAATTTGAAAATGAACACGAAATAT
CAATAAATGAATTTCCACATTATCTATTATTTCCGGGTCTTTTCGTTGCATTTACTTAGC
TAGCTGAAATATGATTATTTGATAAACATGAGAAATAATTTTTATACAAGATATGGTGTG
GCATACAACACTAGGTGGTTCAACCTGATTAGCTAGCATGTTATCCTTTGATTGTGGTGG
CATGAACATGCTCCTGACTTTTTTTGGTTGGTCATGAGCGATTCAGCTAAGCTATTTTAA
GTATTGAAATGTTATGTCCAGGCAAAATAAAAATGTATATCAAAAAAATATGTACTCCCT
CCTTTTCGGTTTATAGGGCTCATCTCAAAAATTTCAGATTTCCATTATATTAGGCTCATT
TTGAGTATAATTGACTTAAAGTGCTTTCAGCCCACGCTATATTTAATATATAGAGTTTAA
AGAAAAACGATGAGTGGCTATGCATACATCGTTTTCTACATCCACTATTCAAGTCCAATG
AAAAGGAGGATGCTACATTTATTATCTTGGAAATTGAATATGTGAGAAGTATTTAATAGG
GTAGTTAAAACTAGAGTCATCCAATCACAATTTACCTTGCTTGATGAGATTTTAGATTTG
AGCCCAATAAACCGGAAAGGAGGGAGTATATCCAATATGAAAAATGATCACTCTCAGCCG
GTTGATAATCACGATGCATTCGTCGCCTCCGTTGCCACACATCCTTGACATAAAGACAAG
TGACAACATCTATTTGAACAACAATGATTTTATTCGGTTTTTAGAAATAATCCTACAAAA
AGTCTTCTGTTACGAAAATAATCATGTAACAAGTCCTTCATTACAAAAACAAAATCCGCA
ACAAGACGGCCGTTGCAGATTTCTGAGCAAAATGTCTATTGTAAAAGAAAAAAATTACAA
CAAGACATGTATTGTAATGATGGATGATGACGCACGATGGCTTATGCGTTAAATATATCG
GAACGCATCCGACCGATCATTCCAAAAATCAGCCGGCTCACGCGTAGTACGGTCCATCAA
ATATGCAAGATTTTAATATGTTTATTAAATACCGGAGTAGTTTTTCTAAATAAGGATCGG
TGCTGTTTTTTCAAAAAATAAGAAAACAGCAAATGTAATGCAGAGTCGAGAAGCTGCTGG
TGTCTTCTTCATGATACGGACCAAACCAATTCCGGCCCAACCGACGGACACAATCCAGTG
ACCTCGAGCCTTGACAGGAAGACGAGAGAATTCTCCAGAAGCGTTCTTTCTCCTTCTCCA
CCGAATCATCCCCAGCCCTCTATAAATTCTTCCACCTCCCGATCGACGGAAACCCAAGAA
ATTTGAACAAATCACCGATCAAAGAGCTCCAGTAAGCAATCGCTCATCCTTCCGCTTCCA
ACGCCAGCCAAATCGTCGATTCCTTGCACCAGCAGCTCGAATCCCCACCGACAATGTCGC
TGATCCGCCGCAGCAACGTGTTCGACCCCTTCTCCCTCGACTTCTTCGACCCCTTCGACG
GCTTCCCCTTCGGCTCCGGCAGCAGCAACAGCGGCGGCAGCCTCGTCCCGCGCACCTCCT
CTGACACGGCGGCCTTCGCGGGGGCGCGCATCGACTGGAAGGAGACGCCCGAGGCGCACG
TGTTCAAGGCGGACGTGCCGGGGCTGAAGAAGGAAGAGGTGAAGGTGGAGGTGGAGGACG
GCAACATCCTCCAGATCAGCGGCGAGAGGAACAAGGAGCAGGAGGAGAAGACGGACACCT
GGCACAGGGTGGAGCGCAGCAGCGGCAAGTTCCTGCGCAGGTTCAGGCTCCCGGAGAACG
CCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACGGCGTGCTCACCGTCACCGTGCCCA
AGGAGGAGGCCAAGAATCCTGAGGTCAAGGCCATCCAGATCTCCGGCTAGGCGTCGGCGT
GCTCGCGGCCCGGTCGTGGCGATGGAATAAAATCAGAGTCCGGCTGTCAGTCTAGTGCTC
TAGTGTTGTGTGCGAATGGTCCGATGTTCATTAGTCTGTATTTTGATTCAGTGTTTTGAA
TCTCTCGCGTCTGTATTTTAGAGTCCAAAGTTTGTTCATCAGTTTGTATTCCATCAGCAA
CTGAGCAAATCCATTACCTTCTCTGCTAATTTGTGAATGGTCATGCGAACGCCCATCAGC
AACTGAGCAAATCCATTACCTTCTCTGCTAATTTGTGAATGGTCATGCGAACGCCGACAC
GAATGTTCCTAACCCTCAACATAGTAGTTCAACTCGGTAGGATGCGTAAATAATAATAAT
AAAATACAATCAATAAAAAAACTCGGTAGGATGCGCGGTGGCAAGAGGACAACGAGTACC
AGGTCTCTTCTGTCTCCCTGTCGCTCCTCACTTCGTCAGGTCTGAAGAATTCGTAGGGGA
CGTACGCCTCAGTGTTTTGCGAGTGCGGAGTGAGAGTACGTGCTTCCAGTCCAGCAAATA
CAGCAGCTTGGCCTGGCCAGGCCCGTCTCCGCCCCCGGCTAAATTTCGTTTTTTTACCCT
TTTGAATAAGCTGATTGTTTTTTCGTCATTTGACCTAGATCTTGACAATCTATCGTCGGG
GTCTTTGATGATTATTCACGTCAGCAGCGATAGATAGTCGTCGTCCCCTCCATCCCCTCC
TACCGTCACAGGTCCCCACGATAACGTGTATCACACTACTGTCGCAGACCCTGACGGTAG
GGTGTAAGCAGTTATATGTGATTGGACCGTCCGCCCTAGCCCCATCTCTCCCTCCTAGAC
GCGAAGAGCAAAGGAGGAACTCCCTCTCGCCCCTCTCTCATCTCTTCCACTCCTGTTCGG
ATCTTCTTTGTTTCTTTATCGTTTTTTAGATCAAGATGGCCCCGAAACAAGTAAAGTAAA
CTTCTCCAGTCCCTTCAATTAGTTTTAGTAAAATAGCTTCTGATTCGTCGCATTATTTGC
TTCAAATCATCCCTTTTATTAAACTAGATTTAATTTGTATGTTTAGGGATGTTTAGAGTT
TAGGCCTATTGAGAATTATTTGCTTCAAATTATCTAGATGTTTAGTTATTATTTAGGGAT
GATTTGAAGCAAATAAAAGGAATTAGCATGCGTAGAGATGTATCAGTGGTCAATAGTGGG
TAGCCTTTTTCGATAAGTAAGAGTGTCAAACTCAATGAGGTGCTAAACGTAGAATTATTA
TTCTCTCAAGTTCT