morexGenes - Barley RNA-seq Database

Contig contig_138060
Source Contig contig_138060
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_138060 (9837 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_138060

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6764	2	1783 bp	MLOC_6764.1	Available	Available	LOC_Os07g33400.1, FRAME:+3, EVALUE:2e-54, 13107.m03394 protein OsFBDUF38 - F-box and DUF domain containing protein
MLOC_67736	3	2971 bp	MLOC_67736.2	Available	Available	LOC_Os08g41890.1, FRAME:+3, EVALUE:0.0, 13108.m04501 protein microtubule associated protein, putative, expressed
MLOC_6765	1	1503 bp	MLOC_6765.1	Available	Available	None
CDS Structure of MLOC_6764

CDS Structure of MLOC_67736

CDS Structure of MLOC_6765

Contig Sequence (9837 bp)

>contig_138060 9837 assembly3_WGSMorex_rbca.fasta
TTTTATAAATTAAGAACGTGTGGTATTTCTTTCTCCCGTTGCAACGCATGGGCTCTTTTG
CTAGTAGAAAAAAAAAGAAGCAGAAACAGAAACAGAAAAAAAACAGATAAATGAAAAAAT
CCGGTTCAGGGAACCTTCTAGAAGTTTCCTAAAACCGAAAAACCCCGGTTAAAACCTCTA
GAAGGTTCCTAAAACTGGGCAAGGCTCCCTAGCTACCTCGCTACCTGGGCCAGCCCAATC
CCCCGCCTGCGCTGTGCGAAGCCTCGACAACGCTTCCCACAGAGCGGCAAATAGGATTTT
CCTTCAATGGCTACATCTTTTGACTGCTACATCACTCAGCTTGAGTAGCTCACTAGGCCG
GTTGGGCCAAAGCCCATAGCGACAGTGTTGTTCACTCACCAGTCACCACGGGAGACGGGA
CCATTGCCCCCCAATTCCTCATTGAGTTGACAACATTGCAGCGGCGGCGGCGGCTCCCCA
TGGCCTCCGAGCAGCCACCAAGTCCGCCGCCGTCGGAACCCGCCCCTACCACCATAACCG
GCCTCGGCGGCGACCTCCTCCGCGAGATATTCCTCCTCCTCCCGTCCCTGCCGAGCCTCG
TGCGCGCGGCCTTCGCGTGCCGCACCTTCCTGGACGCCGTCCGCTCGTTCCCCGCCTTCC
GCCGCCGCTTCCGCGAGCTGCACCCGCAGCCGCTCCTGGGCATCTTCTTCGACCCGGACG
GCCCGGCCATCCCTTCCTTCGCGCCCTTCCGCCGCCGGGACGACCCGGACCGACGGGCCG
CCGTCCGGCGCGGCGACTTCTTCCTCACCGGCCTCCCCGACGACGAAGACGACGCGCGTC
CTGGCTGGGTGATAAACGACTGCCACGACGGGTACCTGGTGCTCGAGCACATCTACACGC
GGGATGCCCTCGCGTACAACCCGCTCACGCTGGCGCTGGATCTCCTGCCGCCGCTGCCGG
AGGAGTTCTACGACGACTTCCAGGGCTACTACACCGGCCTCGACTACCACATCCACGCCC
CTGACGAGCTCGACGGGGCGTTCCGCGTGATGTACGCCTGCCACGACGACTTGCGGGCGC
GCGCGGCGGTCTTCTCGTCGGACACCAGGGCGTGGCAGGTCCTCCCCTACTCCGAAGCTC
TGAGGGCGACGCCTCAGTCCGGCGAGCATGAGCACTGGCTTACCGATGGCAGGATCGTGG
ACGGGTTCATCTACTGGGTGTACTCGGATGAAGACGCCATGCTCGTGCTCGACACCACCA
CACTGCACTTCTCCCGGGTAGATTTCCCGGACTACTTGAAGGGACTAACCAGCATGTTCA
GGGTTGGCAAGACCAGGGATGGGGTGCTCTGCTGCGTCGTTGCGATTGAATTCAACCTTT
ATGTTTGGCTCCGGGAGGTTCGCGATGATGGCGTCGAGGAGTGGGTGAGAGGCCAGCTGT
TTCAGTTAGATGACATTGTTGAGGAGACCGGGGGTACACTTGAGGAACATGGCCAGCTCA
AGGTTCTGAGTGTTGTCGATGGAGTTGTCTACTTCTCTACCCATGAGACCTTCGAAGATG
CTAGTCTTCCTTGCTGGTTCCTATCCATAGACCTGGAGGAATACAACATGGACTTGCTCT
TTCAGAGGAACTATGACAGTCGCATCCATCCCTACATTATGCCTTGGCCTCGTTCTTTGG
TACGCAACAAGGCGTGTCTTCAAGTTGAAGGTGCTTGATGAAATGTAGACAAGGTATTGT
GTTTGTTTCCTTTTTTGACCATCCTATGGTTCAGTTTCCATATTCTGAAGTTGGGAAAGA
ATAGGTCATTATTTGCTCTGTGATACGAGTAAACTGCACCGCTACATTTTATTAGCCTTC
AGCAATGCTTGTTTGTGTTGTGTTGTTTTGTTTCGACGTATTCATGCCTGATGGGCATCA
TCGATCAATACTAAGTCTAGCAATAATGCCCTCTGTTAATTCCCTTCAATCGCAATGACG
TTATCAAGCTAGTCTTTAACTCTATATCAGTCACCGTATTTCTAGAACATGTTCAATTAT
TACACTTCACTTCCAATTTAACAGATTCCGCTTTTTGTTTGGTACAGTAGCCAGCTTGCC
ATTTTGCTTATGTAGTACTTTTATTTCTGTTGTCAGTCAGACTAAGCTTTTGTAGTATTA
ATAGCTAAATGCTTCTGCTGATTATCCATTTCTCCTAATCACTTATATACCAGTAATGTG
GTTATCAGCATGAATGAAGCCAAAACAACTAAGTTTAGATTAATTTGCATATTGCAAAGG
AACTCACTGTTCTATGCAATCTGAGAACTGTACTACTTTAGAAAATTGTTTTACTGTTTC
TACATCCCTGAACTAATGTGCTTAATTTTTTGCAAACTGGGATGTCATGCATGACCTTAT
TGATCAACTGGCTGCCTCCTTTGAGATTCCGTAGCAACTACATCGAATTCAAACCCAAAG
CCACTACAAAACCATAAATCTTCCTAGTACCTCCACATTATGCAAATATCTATGTAAGAT
AGAATCATCAGTTAGAAACCAATTGGAAAAGCTAGGGAGGCCATATACCTTTCCTTGCAG
ATCCATCATAGTAATGCATGTCAAAATCTCTGATGCAAAAAATTGATCACCTGACACACA
TCAGTAGGGGATGAGTGTCAGGACCTAGAGGAGTGCCGATTGAATCCCTAGTTAAGCATG
GTTTACATAGCTAAGCATTTTTTAGATGCAAAAATTAAACATGGTTTACATAGATGCAAA
AATTGTTTTGTTTACAGTAATTAAACCTGGTTTACATAGTTAAGCATTTTTTAGATGCAA
AAATTACCATAATCTGAACATTGAATAAGCAAGATTGCAGACCTTCAAATTGAGTGGTAG
CACAAAGCTTGCATCCAGGTCGTTCCTTCTCTCCCTTCTCTGCTTTTGTATGTTCTGAAC
GTTCTGAATTTTGAGCACTTGCAGGTAGCTTCTGAACTGAACTCTGCTTTTAAACAGATT
ATTACACTTCACTTCCAATTTTTTAAACTGTTTCCGCTTTTGTTTGGCACAGTTGTCAGC
TTGCCATTTTGGTTATTCATGCCACCACTGAAGTACTTTTCGTTTTTACAAACTGGGATC
TCAGCTGATTAGCATTGGTTTATAAGAGCTTCTGCTGATTATTCCTTTTTTACAATGACA
TATACACCAGTAATGTGGTTATCTGCATGAGCCAAAGAAAAAGAAACTAATTCTAGATTC
ATCTGCATACTGCAAAGTAACTCACTGTTTGATGCAATTTCAGATCTGTACTACTTCAGA
AAAGTGTCTTACTGCCTCTACCATCCCTGAACTAGTGTGCTTATTTCATGCAAACTGGGA
TCTCAAGCATGGCCTTATTAATCATCAGGCCGCCTCCCTTGGAATGTCGTAGCAACTACA
AGTCCTGAACACGATGGATGGATCATATGTGGAGGTCGGAAGTGTATCTGTATTTGCATC
TCAGAGATGTCAAGGAGCATTGATATTAATCTTTTGGGTATCTCTATTTGGCTAGTGTTC
AGAAGGCTATAAACCTTGTTAACATCATGGGGTTAATTTGTGCTTTTTATCATGGTTATT
CAAATGATTTGACCTTTAAACCCCGGCCTTTTCAGATGCTTCCACCATCTTTAGTCATAG
TAGTCATTTTCTTTGCTGTCTGCTAACAGCCTGCTTGGTTAGAAGCCAATTTTTTGGCAA
CTCTAACAAATTCGGAGCTGATTGGTCGGGCCCCAGTTTGCAGCAATTGGTCTGACCAAA
CCCTAGCCAAAGTTGCCAAACAGCCAAGTGTTGAGCTTTGGCAAGTAACCAAGCAGCCAC
TAAATCCCAGGCTGAGATATACTGTTGTCCTTGGGTATTGGAATATGTAATCTCTAGCCA
TTCCCCTATGCCTACTTGAATGTAGAGGCGCCACTGCTGTTCGATCGGTTGCATACTCAG
GTGAGAACACGGGTAGAGGCGCCAGAGCTAACAAAAAACCTAGCCACCGCCAGCACCTGC
TCTCTCCTCCCCTCGCCGCGGCCGGCGGGAGTCGCCGGGCTAAGCCCGTGCGTCTCGGCG
GCGGCGGGGAGCTCGGCGGCTTCACGTGGCGCAACGTCCGTCCTTTGGAGGAGGGAGGGC
GCTCTTCGTCCTGCTCGGCGGCGACCCGATGGCCAGGAGCGCAGATCTGGTGGGTGGCTC
CTTCGACGGCTTCTCGTGGAGCGTTGTGCTGAGGATCCGGAGGCAGCGTGCATGGCTTCC
TTCCACGTCCCTCAGATCTGGCCTGGATGGGGAGGGGTGACAGCCCTTCCGTCCCTGCTC
GCAAGCTTCCCGCTGGCCTGCCTCTATGGGCCAGGTGCAGCGGTGCTGCTGGTTTTAGTC
GGCGGCTGGGTGTGGTGCTCCGATCTGGTTCGCCGGGGACTGGGACGCATGCGGTGGTGG
TGCTCAATGGCGGCAGAGTTGCGACTAGGAGTGCGATGGTGGTTCATGTGTGGCAATGGC
GCGTTTGCTGCGCAAGAGTGCACGGGTCAGAGGAGGTGATGGTCATCAGTGTGGGAGTGA
AGGCCCTGCTGCTCCAGGCGAAAGCTTGGCTGGATTTTTAGCCGGCCGGCGGCGGCTGTG
CCCGTGGGCGTTGCTATCTTTCTTTGAAGCGTGGTCGAGGAGTTTTTGAAACCTCTCCTC
TTGGGTCAAGATCTTCGGGCGAAAGTCTTTTGGATCGGGCGGCGGCGTCGTCTTTGCGTC
GCTTTCCCTCTTGTGGGCGCCGTCTTTGAGATCTTGGTCCCTTTGGCATTTCCGACGGGC
TGGACGTGCACGGCATCGCGGTCGACAGGTGGTCGATTGGCGGTGTGGGAGGTTGGTGTT
GCCTGGCAACGACGATGATGGTGCGTGGAGCTGGGTCGCGGCTTGTCCTTCTGTTGTCGA
CGGTCCGGTTCGTCATCGAGTGTCTATGCTTGTTTCTCACTGTGACAGAGAAGTCGGATC
TGCATGCGGTGAGGCCCATGCGGCAACTATGACTCCATGAGGGTGATTTGAGCGGATGGT
GCTTTTCGGAGGTTGCGCTGGGTTATGTCGGTACGAGGCGTGCAACTTTCTCCTGTGAAG
TGCATCAACAGAATCAGAGGTGACGGTCCTCGACATCTTCGGTCGATTGTTCGGTTTTGG
CTGGCAAGGCCGTCGTGTGTTGTTCGTTCGAAGGGGTCTTGACGGGTCGTCTGTGGCGAA
GTCGGAGTCGGAGTCGCCTGCTCGGAGAGAGGTGATGACAATGACAATGCATGCGGCCTC
GACGGTGTGTGTGACCTTGTTGGTGCCAGGTTGGCCGGTGTCCTTTTGAGGGTGCGTTGT
AACGGTTTTCGTCCGGGTTTCCGTGAATTAACCGAAGAATTCTCTTCTGCTTAATTAATG
AGATGAGGCAAAGCTTTTGTCTCCGTTTCAAAAAAAAGGTTGGAGTTGATGGTAAGTTCA
TATGTGACACCACATAAATAAACAAATGCACTACCCAGATATAGAACTAGCAACCTTCCA
AGAGACATAAATAAACAAGTGTTACTTTTACTATGTATGAGACATATCTCAAATAAACAA
ATACACTTTTATCCTGATGTGAGAATAACATTCTTATAAAAACAAAAATCATAAATGCAA
GTATTCCTTCAATTCAAAATCATGGTCTTGATTTTAGTTTCTCTGCCCAACCAAGTCTTT
TGGTTTCATGTCCAGCAAAAGAGGAAAACAAATTACAATTCAATGCATTGATAGATGTTG
TCCTTCTATCTAATCTTTGGTCTTTTGCATTTAACTTACTCACGCCCATTCTCCTACGTT
CCAAATTCAAAATATATCTCATTATAAATCTTGTGAAAGACCTACTAATAGTCACTCGAG
ACTCTTTAGCGACTGCAACATGATCTTTTATTATATTCGTGCTTTCTTTTTAATGGTGAA
CCATGCAATAGCTACAAGACACCATCATCTTACGATGATCTCCTAAGCCAATAATAACCC
CTTGTTTTTTATGGCTTCATAGCAACGCACGGGCATTGTGCTAGTGTATTACCTCATCCG
TCCCAAAATAAGTGTCGCTGCTTTAGTATAAAATTTGTACTAACTTAATACAAAATTTGC
ATTACTTATTTTGGGTCAGAGGAAGTAAAATATATGCCACATAAGCATAAAAGATGATGT
GCCAAGTAATTAATGAGGAAAGAGGCAATCAAACTATGACCAGCCTGATACATAGCAATA
AACATATGAAGAAATACATTTTGGTTTCTGATTGCATATACATCTTATATGAAATAATTT
ATTATTATTTAAATAAAAAGTTAAAATAGTTAAGAACTATTTTTAGAATAAACTTGACTT
ACTTATGGAAAAAATTACACGAGTACATGTTCATGTCCAAATGATATCTTCAAATGTCCA
GGCAAAAAGCAAATTATTTTGACTCGTGGAAGAAAAATAAGTTCAGCTTTTGGCATTTCT
AGACCACCGATCTTTTTTTGTGTGTATGTGGACAGAACACAACCGTTCCATTGTCAAGCA
CGCTTTTGGCAACTAAAATGACCATGTACAATAAAACCATAATTTTAAATTTTGTTTTGA
ATTTACCATTCATCCCAGAAACATATTCACCTCGGAGTCAAAGCTCCGTGTCCCACCATG
TGAGCATGAGTTACAAGAGAGAGAGGGGGAGAGGAGAGAGAAACTATTTCTGACTAGGAT
AAAACTGGAGTAAGAAAAGTGACCGGCTTTTAGAATTAAGGGAACAAACCAAGAAAAACG
CTTAAATTCATTCGGATGATTTCTTTCCTTCGTAAGCCGCATTCAGTGTTCATCACGTGT
CCCATGCAGGGCCACCACCGCTCCATTCCAGCCTTATCTATTTGCTGCGAGTCTTCTGCA
CACGTTTTCTTCTTTCCCCCTTTTCATCCTCACGCGACCCTGCTAAAGAAGAGGCCCTCC
TGCGGCTTTCACGCCATGGCTCGCAGCCTCCATTGATGCAAGTAGGCGAAGGTCGACACC
GGCAACGCTACGACGCAATTGCAGCAAGGTCGAGGGTGGGCATCTCTGGCCAGCACGATT
GTAAGGTTCCCGCTTGCCACTGCCACTGCATGTTATAATTCATGTTTTTTGCAGCAGCAC
CATTGTTGTGACTGGACATCTCTCTCAACTCCGACCGTTGTGACCGACGGTGCTGCCTTG
CAACATGACCAGTGCTACCAGTGGAAGAGGCAGAGGTGAGCACGTCTTATGCTGCTGCTT
CTGCAACAACAACACTGCTACTCTACGGGTGGTCGTGCGGCTCGTCGGAATGGTGCGTCG
GACCATCCCTCTCAACTCCGACGGAAGCATAGACGACGCTGCAATGGAGCTTCGTCGGAC
TTCGTCGGTGCTGCGTTGGAGCTCCGCCGGAGTTGCAATGGGACTTCGCCGGACTTTGTT
GGAGCTCCGCCGGTGCTGCAATGGAACTTTGCTGGACTCCGTCGGTGTTACGTTGGAGCT
ATAGACACACCGCACTGTGCTGCAATGGAGCTTTGCCGGGGGTGCCACTAGCGCCGCGTT
GAAACTGGTGTGCTGTCGTGGCGTTGGTGCATCGAACGGCCACCAACACATTGATCTGAT
GGCTATCTAGGCGGAATGATTTCATATAGAAATCATTCCGGTGATTCGTAGCATGCGCCA
TAAACCAAAGCACCTCAAATCCCAGGATATAAAGTATCCCTCGTACTTGTTTTAGGGTTC
ACTTTACTACTAAAAGCTTTGACTTGATTTAGATTATCCTTTTGAATGTGAAAGATGTTT
ATTTTGCAATCCACCTTCTCATGTAACCAGATTTTGACGTATTTGACTATGGTTTTATCC
TAGTTTGCGTTGCATGCTCGTGGGTGCTAAAACACCATGCACTACGAACATAAGTACTCT
TTAGTAATTTTCCGTGAGCACAAAGGTAAAGACATAGGGAGCTGCTACATATCATCCGCC
GGATTAAAAGAAGACTTAAGCCGCCCCGTGGCCGTTAGATGCGTCCATCACAACCGTTGC
TTGGTCATTGTAGATCCTGCATCGCTTGCCCGCACTCCGCAACACATACCTCACCCTCTC
AAAGCATCGCTCCCTCGCATCGGGCAGTCGGTCACCGCTTGCCTCCAACTGTGTCCTTAG
TTGATCGTCGCTCATCGGTACTGCTGCAAAGCAACACACATCGCATCTCCCTGTGTGTAG
TGACGTCCGCCGCCGGCAACCACTTCATCACATCACCGGAACGTTGCCACGACCGCTCCA
TTGCAACGATAATAGCTCCATTACAGCGTTGGGAGTTGCGGGCGACCGCTCCATTGCAGC
GTCATGAGCTCCATGGCGTCGCTCCATTGCAACGACGACAGCTCCATAGCAGCGCCGAGA
GTTGTCGGCGACCGCTCCATTGCAGCATCGTGAGCTCCATCGTAGCGTCGGCGGCCACCG
TCGATCGCTTCATTGCAACAACGATAGCTCCATTGCAGCGTCGGAAGTTGCCGGCGACCG
TTCCATTGCAGCGTCGTGAGCTCCGTCGCAGTGTTGGCAGCCACCGCCGATCGCTAGCTC
CATTGCAGCGTATGAAGTCGCCAGGAGCGTTCCATTGCAGCGCTGGGAGTCGCCGGTGAC
CTCTCCATTGCCGCGCTGAGAGCTCGACTGCAGCGCAACGAGTCGTCGGGAGCCACCGGG
CGCTCCATTACAGCGCTGGGATTCACCGGTGAGCACTCCACTGCAATGTCCAGAGCCGCC
ATCACAGCTCCGCAAGCCACCGACGAGCGCTGCATCCTGGATGGTTGCCACCTTACAACA
TTGTCGTTGCCTCATGCAGACACTATGGCGAGCGGTGGTCGTCCTTTTGCTTTGCAGCAA
CGGCCATGCGTAGAGGAAGTGCGGGCAATGGATAGAGGAAAGACCAAAGGAGGAATACAA
AGGATATAGATGAGGAAAATAAAATGAGTGGTTGTGCGGTTCGTTGCGTGGAGATAATGA
AGAGGGATAGCATCGCGTGGGCCCAAGCCATGGGACGTGTGTCGATCCTCGAGCCATCTT
ACGCGTTGCATGGATGAGACGGATGAAACAGAACGTTTTCGAAGACATATGGGGACGGGT
TTAGCCTAAACCTTGGAGCATGTACCCTTTTTCTAAAAGAAACAAGAGAGAAGTCCATAG
TACTACATGTACTTGTTTTAGGGTTCACTTTGCACCTAAAAACTTTTGACTTGATTTAGA
TTAAAATTTCCTTATTAAATTTTGAAAACCATTTATTTTTTCCATTCTCCTTCTCATATA
ACTAGATTTTGATGTGCTTGACTCTGGATCTTCTATTCTTAAATAACTACTACCCACTAG
CTATTTTTCGTAGACATGCAACTATGCCACAAGAGCAAGTCATAAATTACATTGTTTTTT
GCATTACTCTACCCATGCAAGAACTACATCATCAATTCATGCATGTTACACACAAGTTTT
TTTTGCAATATATGTGTTGGTTGCTTGCACCATACCTATGCAGTTTACATTCACATTTTT
GTTTGACATGACATTCTTTTAATAGTAATTCATTTTTTATTTTTATATCCTTTGCATTTT
TTTCATTTTTAAGCTTAGTTTTGCTTCTCATTAGTTATAGACATTTTTTTAGAAATTTTA
TGCATTCTTTCAGCAAGTTTTCTGCAGTAACGCGACTGGGCATCATCTAGTTTGTCTTAG
TTCTAGGAGTCAAAATGTTGTGCTCCATGAGCATACTGTGCACTGCTGTGGAAGTGGGTG
CAAGGCGTAAGAGAGAGAAGAGAGAACAGGTTGTCAAAAGGTAATAGATGCGGTAGA