Contig Data
morexGenes
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Map Locations of contig_138049 (5257 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_138049

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6752 1 684 bp MLOC_6752.1 Available Available None
MLOC_6753 2 2151 bp MLOC_6753.1 Available Available LOC_Os07g07310.1, FRAME:-2, EVALUE:1e-17, 13107.m00711 protein polynucleotide phosphorylase, putative, expressed





CDS Structure of MLOC_6752






CDS Structure of MLOC_6753






Contig Sequence (5257 bp)

>contig_138049 5257 assembly3_WGSMorex_rbca.fasta
GTCGCATCTTGGGCGTGACATGTGGGTACGAAGAACACATGCGATCTAAAATATGAAAAA
CTAGAAAAATCTCACCAAGCAACCTGGAAATATGATACCACTTGATAGAGGCAAAGGTGT
CTCGTATTTTGATGAGATGTTGACGATCTTTGTTATGGAGTAGACTTTCACAACCCGACT
ACGAACGTGCGAGGACGTCATGTCTTAGCAATCGCTAAACCAACTCCGGAGGTTCTAGAC
CATGCAGGAGCACGGTCAACCTAACCATGAAGGACTATTTCCTTCACGCAAACGAAGAAC
AAGCAAGAAACTAAAATTGCAATTTGAATATTTCGAATATGAGAGGAAAGCTTTATTTAT
GAAAGTGGATTTTGTGATGTCTTGGTCTGGTCGTGGAACACAAACGAAGAACGTGAAGTT
GTAGCTATGACGAACTTTTAATCTAAGCAAAACCCAAGTCTAAATTGCGCCCTAAGGGTT
GTATATGTGGGGGAATATAGGGGAATTTCGTGGCCCCTTGGAGGAGGGGTCTGAAACCAA
CCCTAATCCGGTTTCCCCACATACACACTCTAAAAACGGCCTATAATGTGGTGTTTTGAA
ATACATGGGCCTGGCCCAAAAATAAGGTGACGCAACACATATAATAGCCTATGGATGATC
TTATGAGGTGGCATCTTGTATATTTCGTCCAAGCCTTCATGCTCTCATTATGGTGGCTTC
AAACTGCGAAAATCACCACTGGAAACTCCTTTGTTCTTTCCCGCGTGTGCACTGTCTTCT
CCATGCTTAATACCGCTCCAATGGCCATCCTTCTTGTCCATGCCAGGTCCTTCATTCATA
ATAAAACAAAAAGTATCTAATTTAGGCAGCATCATATGTTCATGAGCATTAGAAGGATTT
CCAAGAAACGAAACTACGTGGTAATTCATTTGGTGTGCATGAGTTCTAGTAATTGGTCCT
CTATGTATAGAAGCAGGAGTTGTGGGTGTAACAATTGTATTAGTGTCCTCATCAGCATAA
TTTTACAAGCTTTTAACTTTGAGAGGGATGAGATGTGTTGTTGAGCACTATGTTTGGGAT
TCTATTATACCGCCGAAGCACGTGATCTTTTTATGGTCGGCCTTATGGGGACGTCTAAAT
ACACGAGATAAATATGGTCAAATAGAAATGGCCTTCGCGTGCTCCTTGTGCTGATTGTGA
TGTTTGTCTGACCACAGAAAAATGTTAGCCATATGATACTAAGGTGTATCCCGTCGCGAG
GTCTCTCGGAGAAATTTGGTTTGTCTGCTTTGGAATCCAGATCTACTGGTCTTATGAATT
TTTTGGAGAGTGTTGCTGATCACCTTGGTTTTCCCCACAAATGGAATATCACCTTTGCGG
CATGTGCGGTTACGCTCTGGCACGCCCGCAATGATAGAGTTTTTGATAACAAGCATTGGA
CCACTCCTTACACAAGTCTCTACGTTGTTGACATGATTCGACTTTGGAGTAATGTTGCGA
CGAGAGGATAAGAACGCTTTGTTGGTCTGAGCGCATAAATTAGACTACTACGTATGGTGC
CTTTTGTCGATTTCAATCTTCCACTTTCTCTACTACATTATCCTCTCTTTTTTCTTTAGG
CCGTTGTGGCCTTTGCACCTCGGTGCACATCACAAGACTCGTGTAATTGACCTATTTGTC
TTTAAGCTCCGTCTTATTTTGAAATATATGAGGTAGATCACAATCTACCTTTTCATTTAA
AAAGAAGAAGAGACAAGTGGGGCCCAAATGGGAAAGATACATGGGCCAAGTCCAACACAT
GTCCGAGAGCCAGTTTGCGACACTCTATGTCGAGGACTCCCAGCCTCCCATCGACGACCC
GATGCCTTCAAATTCAGATGTTTTCGAGGAGTCTCCTAGGTTCAATCATTTGTGGCTACA
ACATTTGTGCTAGTTCAGCCCAATGTTGCAACTATGTTACTGCTCAAAAGGCACACACAA
AGGAAAACAAGGAGGGTAGAGTTCTTTAGAGAGAACTCCATGAAATGGCATCCGTATTTG
TCGGTGTTCGTGCTGCCACAGATTGTCAGGTTCCAAGAACGGTTGCCACAATGTCAGGTT
AGAGTTCATGGAAGCATGCGATGAACAAGTATCGTGTTACAAGAATGGCTGTCACAAAGG
GTTTAAGAGTAGGCAGTCAGCAAAGGATGCTTACTCCAAGGTCGTGCTCAAGCAGACATG
CAGTGTTGAAGTTGGCAAGGCAAATCGATAGTTTCGGCTGAAGAACTTCATCGGCATCAT
CCAATTCATCATGATCTCAGTGTTCTTTTATTGGTGTAATCGCCTGTAAGGTGTAGCCGG
TAAGCTCACTACGTAGGGTACAATGTAACAGGACCTTGCTCCCTGTATGCACACCAAACA
ACGTGCAATAGTATGAGCCCAATCAATGTGAGTGACCAAACACAATGCATAGAGTTGTTG
CTATGAGGTAGAGCCACTATGCATGCAACCAATTAACATGCAGATGTTAGTTTTTTGCCT
CCATTAGCTCAACCAACCTGGGACAAGTATGCAAAAGAGATAATAAAAAATGGGGCGACC
AACCAAACGCATCATTACTATGTGCTACTCCCTCCGTTCCTAAATATAAATCTTTCTAGA
GATTTCACTAATGGACTACGTACGTATGTATATAGACATACTTTAAAGTATAGATTCACT
CATTTTGCTACGTATGTAGACACCTAGTGAAATATGTTAAAAGACTTATATTTAGGTACG
GAGGAAGTATTAAATACATGCTGGACGTGCAAATGTAAATGAGGTACTTTTGAAAGATGA
GGGTAGTGAAGGAGAAACGGTGTGTGGTGAGAGAGAACATAAGTGGAAACCAAGTTAAGG
TGAAAACCACATGCAAAACTATGTTTTGAAGTTAAAAAAGAACTAAAGATACATAGTAGT
ATGTTTAGACTGTGATGTTCTATTAACATGTGAAATTACATGTTCAAATACAATGTAAAG
AGGAAGAAAATAGCATTGAATAGTATGGACTAGGAAACACCACTATTCATTGTTGATTCT
TTTTCGTCAATAGCTCGTAAATGATTTTGTGATTAAACCCGGAATTTCACATGGAAATAT
AACATTACCCTCTCAATATACTGTATTTTTACAACAACAACAAAAAACTTCTGAACATGC
TATTCAAAAAGTTTTCATTGAAACTCACATGATATTCTGTTGATGACCGAGAAGGAGGAA
GCAAAAGTAGTCTTATGTTTATAGCTATACAGTGAAAACAGAACACATGTTGTGTTCGGT
TCATTTGGCAAAATGGAACAACTGATGCGCACATTTGCTTGTTGTTCTGTGGTAACACGT
GCGCTCGGGTCATTTGACAAAATAGAACTGATGCGTACATATTTGCTTCTTGTTGTGGGG
CCAGACATGTGCTTGATTCATTTGACAAAATGGAACAACTGATGCTCACATATTTACTTG
TTCTGTGGCAACACATGTGCCCGATTCAGCTGACAAAATGGAACAACTGATGCGCACATA
TTTTTTTGTTCTATGGCTACACATGTGCTCGGTTTATTTGACAAAATAGAACCAACTGAT
GCGCCACATATTTGCTTGGTGTTGCGTGGCAACACATGTGCTTGATTCATTTGACAAAAT
GGAACAACCGACACACAATATTTGCTTGGCAACACATTTGCTCGGTTCATTTGACAAAAT
GGAACAACTGATATGCACATATTTGCTTGGTGTTCCGTGGCAACACACAGCTATTTAGCT
AGTCCATGCTAAAGTAATGAAGCCACATTAGGCACTCCTTGCCGCACTAGGACAAAATGC
GGGATGTGAACACACCCAAAATCGTTGTGCATGCTAAAGCGGCAACATAAGCCAGGTGAG
ATTTCACATCTACTCCGTTTGGGAGCAAATACTTGAACAGATCAACAATTCTCCCTTTCT
GTAGGGGTCCAATCTCGAGGGGGCAAGTGGGCAATCTGGGCAGCCAGCCATGTCATGTAG
TTCCGGTAGTACCGTCCGTGGATGTTGTAGTTGCAATCCTAGTCTTTTCAGGCAATCAGT
GTGATGAAGCGGCATGTTGCTTGTGTCACCCTGTTTCTTTCAGTCTTGTGAGTCCAAATG
CTTAAGCACTGTCAGCTGTGCTGTTTTCAAGGGTCTTTGGTGTGGCATTCTCAGCTGCAG
ACGGTTCAACTTCTTTCTTACGTCTGGATCTTCTAGTTGTCATCTTAATAATATCATCTT
TGTACACTACCTTTTCTTTCACTGAACTGCTTGTTTGCTGCTTGATGCTGCTAGGTTCTT
GGTTTGAATCAGGGAGCAACGCTTTGCAACTTAGTCGAAGTTGACCCTTGTCATTTATCT
GGTTTAGGCAATCAAGAAAATACGCATTCAGAAAACAGAGATGGTCAAAACTACTGACGA
CATTCCCCTTCAATCATATCATGTAACCAGAAACTTAACCTAATAGCATTTAGAGCATCT
CTAACAGCAGCCCTAAATTAGGCCTGATGCCCTAAAGCCTCCAACAGCTGCCCTATCACG
ACGTGCCCTACTATTTATAATAGGGCTGCCCCAAATTTTCATCCTATGGGGCAGAGAGGG
CCGCGCGCCCCATGCCCTTTCCTTTCATTTTCACCGTGTGTGAACCAACCGCCACACTGA
AACGCTGTCCCGCCCCCGTGCCGCGCCCGCCTCGCCTCCCGATTTCACCGCCGCCGGCCT
CGATTCGCCCATCGCCGGCCGCCCCGCGCCACCAAAACACCGCGCCGCGCATATGCGACC
TAGCCCCGGCCGTCACGCCGACGGAGATGCCCTCGGACGCGCCGTCGCCGTCGTGAATCG
GGATCGAAGACGTCGCCGCCGTCACCGCCGATTTGGGCTTCTCCGTCACCTAGGCGGATC
CAGGGCCTCCCCGCCGCCGCACTTCACCTCCGCGCGACGCCGCCCACCAAGCTCAGCTGC
CCTATCACGTGCCCTAATATAGGGCTGCCCCAAATTTTCATCCTCTCTGCCCCGAATAGA
GAGGGCCCCGCGCGCCCCATGCCCTTTCCTTTCATTTTCACCATGCACGAACCAACCGGC
ACGCTGAAACGCTGTCCCGCTCCCATGCCACGCCCGCCTCGCCTCCGATTTCACCTCCGC
CGGCCTCGATTCGCCCGCAGCCGGCCGCCCCGCGCTACAAAACACCGCGCCACGCATCTG
CGACCTAGCCTCGGCCGTCACGCCGACGGAGATGCCC