| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_137996
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6715 |
2 |
1248 bp |
MLOC_6715.1 |
Available |
Available |
LOC_Os01g32730.1, FRAME:+3, EVALUE:2e-138, 13101.m03299 protein tetratricopeptide repeat containing protein, putative, expressed |
CDS Structure of MLOC_6715
Contig Sequence (4070 bp)
>contig_137996 4070 assembly3_WGSMorex_rbca.fasta
ACATATATGTTACTCCCCATTGTGGAGGTAGGAACATAGTCTAGAAAAGTGTGTAGGTTC
CTACCTTATGTTACTCCCCATTGTGACCAGCCTAAAGAATCGTCAAAAAATCACTCAATG
GTGTTAGGGGCATTTATGGACAATTAATCCGGAGTTTCTCAGTTGCTACAACCAAACAAC
TTCTATCTTTTAGTTCTCAACTCACGGTTGCTTTTCCATATTTCACGGTTCACAACAGTT
TTTTTGTTTTTTCAATCTACGACAAAACCGAATGTGCAAACCAGTTTGTGATTGAATGGT
TAGAGGGACAATAATATCTTCAGCCTATCAGAGTTCAAGTCCTGGTTCCTGATGTTTGTA
TTATTTCTGGATTTATTTCAAAACTTCCGACGATATGCTTTAAGTGGAAGAGACGTTTCC
GTTGATGACGAGGCGTTTACGATGACTTCGTAAATCTCAAGATGATATGTCGGCTCAGTC
TTTCGAAGGTGCTCATAGGGATAGAATATGTGTATGTGCATTTATAAGGATGAGTGTATG
CACGTGTATTTGAGGGCTTGTGTATGTACTCTGTTAAAAAAACACCTAAATGTGAATGAC
CAAAAGTGCTTCTTTGCGTAAAATCCGGGTGCCGAGGATTCAAACCAAGACGTATTATTT
CAATATTTCAGGGGCTTATGTGCAAAATAAACAACTGAAGCGCTTTATCATCTTCCCGAA
GCGACACCCAACAAGGCAAAGGGGAGGAGATTTTCCTTATCCTCCTGGATGCCGCTTCTC
ATGCGTCTCTCCCCACCGGCGGCGGCGCCGTCGCCGCCGTACCGGCGAAGCCACGGAGGA
TCTACCAGGAGATTCAACGCCGTACTCCCCGACACCTCAGGTGAGTGTTCATTTCCTCCC
ATCCACCTACATTATTGCTTGTATATCTCTCTCTCTCGCTACCGTAGTGTTGGGGCATCC
CTGAGCGATGGCGACTGTCCCCTTGACCTCCATGCCTCTAATGCTTTCCGGCTTTAGATT
GGTCATTGGAGACGCATTTTTGTTATTATTATGTTCGATTTTGGTATGCTAGTCATCAAT
TCAACTTCCTACAAACGCTTAAGGTGCAAAATGTTTGGTCAAAAATCTTGTCATCAGCAC
AACCTACTAGACTATTACTACATCGATTGTTTCTTATTCTAATGCTACATGTCATTTGAC
GATGGCTGGCATGTGATGAAATTTTGTCCCGCAGAGCGAATGTTTCCGGTAGCTAGATAT
GCCTCGTCCTCAACTGATCCGGCGCGTCCTAGGAGCGACGACTTCGATATAGCTAATGGA
CATGGTCATTTCCTTATCAAGTCTACATCTGATCTTCAGGTATGATGGTGAGTCCCTTGG
TCTAGTTTTAGCGTGTATCACCGAATAATCGAGACGTGCCATCGGTTGAGCATAAATAAA
AGCTGAAATGTGCCTTGGGTTTCAACGGATAGCATAGTGTTATTTCAATTCTCAGTAGAG
CTCCATTTCGACTGCTTGCAGATACAGTTTTGTTGATATCTCAGCTATAACGTAATACAA
CTTGCATCTCTTTGCAGAAAGCTGTATCTTGTTTCGGGAAAGCATTGGTGACCAGCAGCG
CTGTCATGCTTGTGACGCCTCCCAGTTGCTTGGCAGAACAATGTGACCCTGGGTACTCTC
TTCCTAACATGCCACTGCTGTTTGCGATAGCCATGGTCGGTGCTACAGTTGGAGGTAATA
TCACATTGTGGGCTAAAAGGATCTTTGCACGTAGGAAAGCGTTTGTGGCTAGCAAAGTAC
CTTTAAGTTTTAGCCCAACACTACACAATTGTTTTTCCTTATATATAGTTTTTTTTTCTG
ATGCTTCATCAACATCTTAAGCGATTATGAATATCTGAAGCACTAAAAAAAGACGCAAAA
CTTGAAATGCTGACAACTTCTGGGAGGCGTAGAAATCTAATCTACAGCCTTATAAAGTTT
TTTTTCTCCAAAAGCGCCCCAAAGTGTGAGTTATATTGTATTAGAAGGAGAGCACCGAGA
AGGCACAAGCTACAACTCAACGAAACCAAAGACATGGTGCATGTACAACTCAAGAAAACC
AAAGACAAACTCACATTCACGTTTGTCTTTTTGCTTATTATTTATTACATGAAAAAAATG
TGTATGTATCCTTAAAGACCGGAATTCTTTCAGCTTTTCAAGCATGGTGCAGACGTGCAG
TTAGCTTTTGCCTATATGACTATTTCTGCCAATGACAGTTTCTTTTGTGATGGCTGTTTT
CCATCATGCTCTTGTTTGTACAGAAAATGACATTCGGTAGTTACTTCATACTGTTTATTT
TCCATTGGTTATTCTGCAAGTTTCTGTAATATGTTTGTCTCTTGGGAGGTGCAACATTTC
CTACTTTCGATTGAATGATTTAGAAACCCTGTAGGGCTGCTTGCGAGACAAAGGAAAGGG
GAACTTAAAAAGCTTAACGATCAGCTACGTCAGATAAATGCTTCACTGAGAAGACAAGCC
AAGATTGAATCCTACGCTCCTGCTTTGAGCTATGCACCGGCTGCTAGTAAGATACCAGAA
TCAGAAGTCATTGTTGATCCTCACAAACAGCGCCTGATCACATATCTGAGGACTGGGAAG
AACTACCTAAGAAACCAAGCTCCAGACAAGGCATTTTCCGAGTTTAAGGCAGCTCTTGAT
CTTGCACAATCTTTGGGTGATCATGTTGAAGAGAAGAAGGCGGCGCGAGGATTAGGTCCG
TCATTGTTTGGCATGAATTTCATTTATCATTTGCTCGTATGCACATTTTAAACTGATTGT
GCTTTGATGCGTCCTTTGTTGCCTAGAGAGCTCAGCAGAATTTGCCTCCCTTCTGAACAT
GCCAATGGTAGTTTGAACATGATAATGTAAATACAATTTCACCATAACAAACTGAATTGT
ATAAACAGAGTAGCATTACTAACTGCAAACAGTGTGATGCCCATTTTACTTTGCTTTTGT
GAAATCCAACTGATGGAAGTCCTTTACGTTCATCAGGAGCATCATTGCAAAGACAAGGGA
ATTACAAGGAAGCAATAAAGTACCACTCCATGGTTCTCAGTATCTCCAAGATGACTGGAG
AGGATTCAGGTGTCACTGAGGCATACGGGGCAATAGCCGATTGCTACACTGAAGTTGGTG
AGCTCGAGAAGGCAGGCAAGTTCTACGATGAGTACATTGCAAGATTGGAGAATGACTGAA
ACAGTGTGTCTGTGCTACCTGTGAGAACGCAAACACGGCTAAACTTTTTGTTCTTCACTA
GTGATATGGTGTTCTGTAGATGTGCAGTTCCTGGCAACAACAAAAAACTCTGGTTTGTTA
TATTTTTAAGTTGTTTCCCCTGAATTATGTGAGATCATTTGGGTCAGCAGCATGCTGTGT
AATTATTTTGGTAGTGATAGCTTAATGTAAGTACAGGCGAAATTGAGCTCTCCGACATGA
AAATTTTAACTAAATACCTCAACCAGTCACTGCCTGTCCCTTAATTTGTTTGCAGTTCCT
TTTCCACTTCTCATATTTGTATGCACTGCATATGGAAACAAATACAGATTGGGCATACTT
TCTGTTATTGGGAAAAAGTTTGTAACTGAACGTAGTTTGGAAAACGTGATAGTTCAGGAC
CTTATGATATGAGAAAGAAGAACGCAGTAAAAGTCTCTCATGGTGAAGGTTTTTTGGTCA
AGGATGAGCTAGGGAGGAAAGGACATGGGATAGGGAAGACAAAGAAAAAGGTGTTGTGTC
ACAAGTGTAAGCGGTGTGTGTTGGGGAACGTCACACGGGAAAAAAAAAAATCTACGCGCA
CACAAGATCTATCCATNNNNNNNNNNNNNNNNNNNNNNNGAGATTGGATCCACATACCCT
TGTAAATCGCTAAGCGTAAGCGTTAACGAACGCGGTTGATGTGGTGGTACATCTTCGCAA
TCCAATCGCGATTCGTACCATGATCTCCCGATCAAGCGCCAAACGGACAACACCTCCGCG
NNNNNNNCATGTACAGCTCGATGACGTCTTCGCCTCCTCGATCCAGCGAG
