Contig Data
morexGenes
Links



Map Locations of contig_137980 (6536 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137980

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6706 2 2595 bp MLOC_6706.2 Available Available LOC_Os06g04000.1, FRAME:-1, EVALUE:4e-93, 13106.m00346 protein peptidyl-prolyl cis-trans isomerase, putative, expressed





CDS Structure of MLOC_6706






Contig Sequence (6536 bp)

>contig_137980 6536 assembly3_WGSMorex_rbca.fasta
CGTTCAATAACGCTTCTGCTGTGCAATCTACANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTGATAGGTCTTCGTGCGTGTAGAAAATTTTTTGTTTTCCCATA
CGACGTTCCCCAACATATCTGGGCCCCTAGCCGCTTATATGCGGCAGATGACCATTGTGG
AGGCAGGAGAAGGAAGACTTGGGATGCTTACTGTCTCTGAGCCTGGTGTATATCATCTCT
TGTCTGAAGAGCAGTGCAAGGATGGGAACGGCGCAAACGAGTGGCAATCTAAGTCTGTCA
TCTCTTTGCCGGAAAATTATTCCTATGGCATCGACGGTGTAGCTGGTGGATACTTACTCC
TACACGGGTCACGTAATGAGACGCGAGTGGTAGACTATTTTTCATCGAATCTACAGACTT
TCCAGATTGAGCGGTTCTGTCAGACTGGTTGTCTCATAAGTGGCACATTGTATGCCGGTC
TCCCACCGTCTTTGTCCCCGCCAACTATTTGAAGTGGTATGCTTGCCCTCGATCTTTAAT
TACTTATTTTGCCAATTATTTCAGCTTAGTGTGTTAGTTCTTTTGGTAGTGTAAATTATC
ATTCTACTTTGGCGAACGGTCCTGAATTAACACTGATGTGGCCATGTTACTTTCCACCCA
TTATAATAATCACTCATATTGCTTGTTAGTGTTTAGGTCCTATTCTAATGGCTAGTACAT
CTGTTCAGTTTGAAATCTGTGAATTTCAGGATATGCAAGAAGTATTTTTTTTTCTCATCT
CGTGAATATGACTGTCATCATTTTCAGTGTCATACAGAAATAGTAATTAGCATCACAGTA
TGCACACATTAAGCTGGATTTGGACATGTCTTGGCTACTTCGTGTTAGTTATTTTTCTTA
GTTTTTTCATTCATTTTTAGTTACTTATTAAACAGTTTGCGTCTGCTAGGTCCTTCAGCA
TGCTCACATTTTCTCCTTGCCTTGATTTAGTTGGTTACTTTCTTGTGAGATCCACTCGTC
ACATTGCATAGGGAACTAAGTGTTATTGACATTAGTAGCAGCGAGCACCGCTATTTTGTA
AAAAACGGCACTTTGCACCTCCTATTCTAAATTTTGTTGGGGAGTGTGCACCATTTCTAA
TGAATTGTTGCTTTTGGCTGGTGAAATTTGCAGTTCAGGCGTTCAGCTCAGGGTGCATGA
CGCAGCAGGTTGAATTTGTGTTTTGTCAGTTGGCAATGTCACATTATATTTCCGCTGTCT
TGCATTGCATGTACATTAGCAGGTGAATAAAAAATGGTTGTGATAGCATATATGAATTCA
GATGCCATGGTAATGCTTATGCCCAGTAATATTTCTGGTCTTGAACTGCAAATACATGTT
TCTTTGTTAGATAACTTCAGAAACATGTTTGTGTAGTTTTACAAATAAAGGTCTTGAGCA
TTTCAATCAAAATGGATGCTCGCCTTAGTGACTCCCATTTTGTATTTTTAGTTGAATACA
TTTCTATCTTTTTATAGAAAAGAGAGGCATGCGGACACAAGCTTTCAGTTCCGCAGTCTT
TTTCTGTCTAATATTTTTCTTTTGAGAGTTGCCGTATCTAAGCACCGTCTCCCTCTGTAA
CCAGGACTTGTCCAGAGAATACGCTGATGGCAAGGACTACTGGGAAGTGTGACTGATGCC
ATGTCGAGCAGAATAAATGTAAGAACTCTCAAAAGGGCGAAAGCAGTTTTCATTCGATGA
CAATTTGCAGTGGAGAGAAGATACTGCCTCTTTGAGCTACTGAAGAACAAGAAGCATACA
ATGGATGTTGACCGCATTCACCTTCTTTCTTGTGTTATTTTGTGCTGTGTTTTTATGCTT
GACAAAAGACTAGACTACTATCTTATTACTATCTTCAGGGCTTTGTTTGAACTGAAGTTT
TGCGGCTTCAGTAAACCCTTTGTGTTGTTTGATTCTAGTATGAATGGTATACCCAAAGTC
TGCTTGTGCTGAACATATATCGTCTCTTTGCTGCTTGTATACATGCAAAAATGCGGGACA
ATCCATATTGATAAAATCAAATTATAGAACTTTGGTGAGGATCCACTGCACCCACGAGGG
AGTCCTCTGTCACTGTAGGTCACATATGCCAGCCTCGACAATCTTTGCCCTGTCGGGTGA
ACTATGGTGAATGCTTGTCATCTCTAGCGGATATGACGGCGCAGATCAAAGTCACCATGT
CAATGGTGAACCATACATATCCACAGTTGAAAGGCCACAAACCCTCTCACAGTTAAACCA
TGTAAGTTCTGCAACTGATTCCAGTAAATCGTGTATTAGTCCAGCTTTATCACAATTTAG
AAGTTGCAGTCAGTAATGCATCACACGGTTGAAGGCAATAAACACATAGTTATATGTGAT
GTAAATTCTGAAACCTATTGCAGCACATCATGTATCCGTTTGTTCGTTCGTTCAGCATCA
CAATTTAGAAGTGGCAATCAGTAAAACGAATGGCTAGTCTGCTTACAGCAAAGCGCATCA
AGCTAGGACTATTCTTGCAGCTACAATCTTCGGATGGATGAAGAACCACACAAGCCAGCA
ACAAAGAATTTAGCCAAAACACCAGTATGTGGATGCTAGGATGTTCCTGTAGGTAGGTAA
AAATTCAAGTAACTATACGCTGATGATCTTAAAGAACCAGATTGGTAAAATTATAGACTT
GATACAGACTCGTGTTACTGACACTACGAATGACGGCCTGTGCGCAGATTTTTCGGACAA
GGAAATTGTTGATGCTCTATTCCATATTGGGCCGCTCAAGGCGCCAGGCCTGGATGGATT
TTCCGCTCGCTTCTTCCAGAGAAACTAAGTTGTTATCAAGGAGCAGGTTATTGCAAGGGT
GAAGGAGTTTTTCCGGACCAGGAGTATGCCCGAGGGGGTGAACGACACTTTCATCGTTCT
TATTCCGAAGGTGGACAACCCGGAGAGCCTCACTGAGTATCGCCCAATAAACCTATGCAA
CGTCATTTATAAGGTGGTGGCGAAGTACCTAGTGAGCAGACTGAGACCTATATTGGATAT
TATCTCCCCACTGACTGAGACCTATATTGGATGATATTATCTCCCCTGAGCAGAGAGCCT
TTGTTCCTGGTAGGTTGATTATAGACAATGCTCTAATTGACTTTGAGTGTTTTCACTTTA
TTCTGCAGGAGAAGGATCCTAGTAAGAGCTTTTGTGGCTATAAGTTGGATATATCAAAAG
CTTATGACAGGGTGGATTGGATCTTCTTGGAGCGAATGATGAAAAAGATGAGCTTCGGTC
GTCGGTGGGTGGGCTGGATTATCGCTTGCGTCACCTCGGTGAGATACACGGTTAAATTCA
ATGAATCCCTTTTGGATTCATTTGCACCGTTGTGTGGGCTGGATTATCGCTTGCGTCACC
TCGGTGAGATACACGATTAAATTCAATGAATCCCTTTTGGATTCATTTGCACCGTTGTGT
GGGCAGCGGCGTTGAAAATATGTCGCAGAGCACCCGGCGTATCCCACCTTCTGTTCTTTG
AGTGTTTTTACAAGTTTGTAGCAAGGATATAAGGAGAGTTAGTTACATTTGTAAACATTC
AATTTTTACATGTTTTATCAATATGACAAACCATGCCTACCAAACAAAAAAATTAAATAA
AGAGGATTGTGGGTGGAGTAGTTTTAAGGATTCAAGGGGTTTTGAGGGGATTGGATGAAA
GGAAGGGATTCACCCAATCCTCGAAATCCCAGCCTCCACAAACATCCCCAATCCTTCCTG
TCAAACAAGGCCTCAGGCGGGATGAACAATCAACCACAAGCCAGCAAAGCATTTAACCAA
ACACTTGTATAATCAGTCAATATAACCACCCAGCACTGATGGGTAACAAACATCGCTGAA
TTCAGGCAACTAAAATTCAGGTGACAAACTCTCTCACAGCTGAAACATGTAAATTTCACT
ACTGATGACAGCAATTCTCGCATCCATTCCCTCGCTTCAAACATCGCAAATTACACGTGC
AAGCAGAAGATCAGGAAACAAGGCATGAACGAGATGGAGGATGCAAGAGAAGTTATCCGG
CGAGCGGGTTGGCGTGGACAGTGACGCGGTTGAGGCGGATCTCGGCGAGGGGGCGGTCGG
CGGGGCCGGTGGGGGTCTTCTCCATGAGGTCGAGCACGTCGAAGCCGTGGATGACCTTGG
CGAACACGGTGTAGTGGCCGTTGAGGTGGGGCTGCTTGGCGTAGGTGATGAAGAACTGGC
TGCCGTTGGTGTTGGGCCCCGAGTTGGCCATGGACAGGGTGCCCCTCGCCCCGTGCTTGA
GCGCCTCCCGGAACTCGTCCGCGAACTTGCCGCCCCAGATGGACGCCCCGCCCTTGCCCG
TCCCCGTCGGGTCGCCGCCCTGCACCATGAACCCCTTGATGTTGCGGTGGAACACCGTCC
CGTCGTAGTAGCCGCTGGCGCACAGGGCCAGGAAGTTCTCCGCCGTCCGCGGCACCTGGT
CGCAGAAAACCTCCACCTTGATGTCCCCCAGGTTCGTGTGCAGCGTCACCGACTGCGGAT
GGGCAGAAAAATACTCGGTCAGCGCGAGAGGAGCGGACGGGAGGCGGGTGAGGAGGGATC
TGGGGCGGGATTGCTTACCATGGCGGCGCGGCGGGGCGGACGGGGCGGCGGCCGGCGGCG
AGGGGAAGAGTCTGGAAGCGGAGAGGAGGAGGGGGAAGGCGGTCTGCGTGCGTGTCTGGG
TCTCGTGGGTTTGGGCCGCTGGGCCGCCCACGCTTTATGGGTTGCGGGTTTCGAACCCTT
TGGTGGTGGCGGTATCAGATTCGAGAAAGTATTTCCCCCTCTAATAAAGTCGAGAAATTC
ATCTCAAAGTTTTAAAAAGTTGGCAATGTATTTCCTTTTCAAATACAGGATTTGTGAATG
ATTGATTCAAATGTTTTTTACGTGAGTGATTTATTAAGGCTTAACAAACAGTAGTAGTAC
TAGTACTCCTACTAGACTTTGCTAATGTGGGGTAGGGGGGTCATACGGATTAACAAGAAC
CTGAATTCCTCAACACCGACTTATGTTAACAAAATTGCCAAAAGAGAATGAACCTGAATT
CACAAACCGGATACTTTACAGATGATGACAGCAACGGAAGAAACCAAGTTCATCGACTCT
AATTTATGTTACCAAAGAACAAAATTGCCAGGAGAGAGAGGAAGAAGGGTAACAGGAGCG
AATAGGTGAATGAACACACTGATTTTTGACTCGGACTATCATGAGACGGGCAATTTACCG
CATGCGACACCTACGAGAGAAGCAGACGAGGATCAACAATTTACAACCTTCCAAAGAGCT
ACCACGCTTGGATTCAACAGGAGCGGAGGAACGGAGGGGGCATGACCAATATGAACATGA
TCCCTGTTCTTCGTTCCACCACCGAAGACATGCGCCACTGCTTCCACCAACTGCCAGCTT
CAAAACTCCCCCGATGGTAGATGCCAAGATGGAAATTCTCTGATCGGAGTTCGGAACAGA
TCAGGTTAAGGCATTTTTTTTCCTGTGTGCTTCTGCGTCTCTTGTGAAGCACCTGGCGAA
GCAGTTATTTTTCGACACCCTACAGGCCAAAAAGAGTACTTTGGACATCTCAACGGTTTG
ATTTGTGGCCATCTGTGACTCTCCTGAGCCTCTCCACCACCACAGGAATATCCTGCTCCC
TCAACGTTGTGAAACAGCACCTAAACCATCCAGGCTCAATGCAATGGCAAGATGAACCTG
GGGTGACATTGACCTTCGCCTCCTCCAACAGCCTGTCCCAAAGCCTGCGTTCCCCTTTCT
CGCTGTAAGACCGGATGAACTTGCTCATGTCCGCCCAGCAGTAGAATCCTCCGCTGCTCT
TGAAGCACTCGACGCCCACCTGTTTCAAAGCATCAACGAGCAAATTGTACGCCTTGCGCA
GCCTCTCTCTGTTAACTTTCAGGTAATTCGAGATAAACTTCTGGTCCGAAAGCATGGCAA
CAAGCAGGCGCTGGGTCGGGGTTGACACGGATGAGAATCTAGCAATCTTAGCGGCTGCCT
CCACGATGCTTTCATTGTACGAATATATGACTCCAACCCGAAACCCTGCCAGAGATAGGT
CTTTTGAGAGTCCGTAGATTATGTGAACCCTGCCTCTGTCAAAGTCTTCTAGCTCGTTCA
CAACCTCTGCCACGCTGACAAATTCACCACTTCCAAATGTTGAACCGGCAAACACTTCAT
CAGAAATTAAGTGTATGTTCTTCTCTGTAGCAAAGTCCAGAAGATCACTCAGTGTTTGCT
TGGGCACAAAGCTTCCTGTAGGGTTGGAAGGATTAGATATGAGAACCCCACGAACCCTTA
CTCCTCGCTTCTTTGCCTGGTTATAGGCTATTTCTAGAGCAGTGATACTGATGTTGAAGT
TGTCGGTGCTCCGGCAAGGAACGGGTATCAACTCAATACCAGTTCGCCATTTTATGTCCC
TGTCCCATCTGTGGAAATAAAGTCACAAATTAAGGACTTCGCTCTGAACACCAAAC