morexGenes - Barley RNA-seq Database

Contig contig_137866
Source Contig contig_137866
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137866 (8053 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_137866

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6660	1	383 bp	MLOC_6660.1	Available	Available	None
MLOC_6659	6	2852 bp	MLOC_6659.5	Available	Available	LOC_Os06g08170.1, FRAME:+3, EVALUE:0.0, 13106.m00853 protein transporter, major facilitator family, putative, expressed
CDS Structure of MLOC_6660

CDS Structure of MLOC_6659

Contig Sequence (8053 bp)

>contig_137866 8053 assembly3_WGSMorex_rbca.fasta
CCGCCGCCACCACCGCCTCCTCCTCCCGCCGCCTCGCCTCCGGCCGCTCCACCGGCAGCA
ACGGCGGGCGGAGGCTGTTCCACACCGCGGTGACGGCGTCGGGGTCCGTGTACAACACGT
GGCAGTGCCGCGTCATGTACCACTGGTTCAAGGAGGCGCGGCGGCGGTCCGGCGGCGCCG
ACATGGGCGGCTTCACCAGGATCCTGCACTCAGGGAAGCCCGACGAGTTCGTCCACGAGA
TCCCCACCTTCGTCGCCGACCCGCTCCCCGACGGGGCGGATCAGGTAACAGCAACACTCC
GCGCTCAGTCGCCTGGTTAGGTGAAACGGCCATTTTATCTACCATGCTGCTCGACGTTTA
TTTTTATTTTTTATGTTGTTGCTTCCCTGGTTTAATTTGCTGTTAGCTGGTTGGGTAGAG
TCCTGGAGAAATGTACATGGAACTGTCTATGGCATTGGTTGATAGGAAGATCATCGAAGA
AGTTCTTGAAACTATCTAGAGATTGGTTTGTGTTCAGTTTCATGCTCAGAACACCAACAC
AGCACCACCATAACAAAATCTGATGTCCCGAGTCCTCCACTTCTGCCGCACTGGAAAGGT
CAGGACATAGATTATAATTCCACTGACACACGAGCGTTGAACTTCTGGACAAAACAACAG
CTGTCCTGCCTTACCTTGTATACAAAACATGTGGGGATCAAGTACATGTGGATCTGAGAA
AATGGTCAGGGCCAAGTTGATGGAAAAGACCCAGTGGCAGCTAGGATGCGTAAACAGGAT
TGGACCCTGCTGCTACCCACTTTTCGTCATGTGGCGTTCAGAGCAGGAACCATCGATTTA
GGATGCCAGCTGCTAATAAACCTTTGGTCAGTATGTCTCTCATCATGATAGGATCTTATG
GTAAAGTAGGAACAGTCACTGTTTGGCGATATCCCACACCTATCATTGTTCATTTTTGCT
GTAGCAATGCCTAGTAGTAGTACGCTGATGGACAAACAATTCAAGATCTCGACAAATTTT
CATTGAGCCTTAGTACCAAAACCATGTATTAGATCTTTGCAAATGCATTTTTGTTTTCCG
TGGCAAATTGTTCCCAAAATGCTGCTCGTTTGAATTTTCTAATCTTAACAGAGTTCATCC
TAAATCTCAGGGATACATTGTTCTTAATAGGCCCTGGGCATTTGTTCAATGGCTCCAGAA
GGCAGACATTCAGGAAGAGTAAGTTTACAAAACTCATATAAGAAGCGTTCATCAACCTTC
AGAACCGATATCATAGTTGATTTTCATATATACTGTAGATATATCTTGATGGCAGAGCCA
GATCATCTTATTGTCAAACCTATCCCAAACTTATCAAGGGATGGCCGGGCAGCAGCTTTC
CCTTTCTTCTATATTGAGCCCAAAAAGTATGAAAAAGTGCTCCGTAAATTCTTCCCCGAA
AATGAAGGGCCAATAACTAAAATTGATCCCATAGGAAATTCTCCTGTCATCATTGAGAAG
GTAAATTTTACCTGGGAAATATATTCGGAGCATCTACTCATACTGAAGTAATTAATCAAT
TATATTCTCCCTAATTTGCTAGGAATCTCTTTCTAGGATTGCACCGACATGGATGAATAT
TTCGTTAGCAATGAAGAAAGATCCCGAAGCAGATAAAGCTTTTGGCTGGGTTCTTGAAAT
GTAAAGGCCTGCCAATCATTAATTCATTATCTAATTTCGATAATACATTCAAGCTTTCAA
TCAGGCGTGCAGGATATCTAACTATTCTGTATACTAATGTTCCTATGCTGTTATTCTGGA
AAACAGGTATGCATATGCTGTATCATCTGCTCTCCATGGAGTGGGGAACATCTTACACAA
GGATTTTATGATTCAGGTTTAGTATGTGACTGGTTGGTTTACAAGCATGTGACCCATGTA
TTTTGGGGAATTGTGCAACTTTCCTCTGAGCTGATAATTCCATTTTGTTGTTTTAGCCAC
CATGGGACCTTGAAATTGGTGATTCATTTATTATACATTATACTTATGGGTGTGATTATG
ATATGAAGGTATATATTTCTCTTTTGATGCAAAATTCAGGTTTCATCTCAGAAGTTCATT
CTTTAACCATGTTCTTCTCTTAACTAGGGCAAATTAACTTATGGAAAAATTGGAGAGTGG
AGGTTTGACAAAAGATCGTACGAGAATAAACCCCCTCCTAGAAATTTGCCATTACCTCCG
AATGGCGTACCTCAGAGTGTGGTATGGTCCAACTCTGCCTACTGATTCTAATATTAGTTT
TCTGCTCGATGACCTTACTTTTCTCTTTCTAGTGGCCATTATTCTGAATTTTCTGCACTG
CTAACCCGTATAATGGATTTGTGCTTTCCGCAGGTGACACTTGTGAATATGGTTAATGAA
GCAACGACCAGCATACCCAACTGGGAATCTTACGCAGCGGAGTGATCTTTGTACAATCTG
ATACTTGGTAAGCCAGTTCGCTCGATCAACGGCCAAGCTTGGATAAGTGGCTCATACGAG
TTTATCCCAGGGCCCTGACTCCAAGCGTGTGTATTCTGGCCTTGGATTGCCGAAAGCCGA
AAGCAGAACTAGTGCAAACAACATGATCTCTTTAGTTACAGTCACACATATAATATGTTT
TAGGTGGGAATTATACAATGGAAATGAGTGGGAGGTGTGTTGAGCTCTTGTTCTTGATGC
TCATTCATGACTTGTGAGTTGTGACTTGATTCCTTTTCTGCTTCAGAAAAAGTGAGGAGC
ACACTGTAATTTAGGCAAGACAATGAAATCCTCTATTTACTTTTTTTCATTTGAATATAA
GTTTTTTTTACAAAGGGTGGATTTTATTTATTTAAAATGAAGCGTCAAGTGGATACAAAT
ATAATGAACACACATTCGGCCTCCACATAGGTGGAATGTACACAGCCAACACTAACGCAC
ATACACCTAAAACACGCCGGCAAAAAGCAGACTCATAGAATATCAAAGCTATGCATGAGC
GAGGAAAAAAATCAAAGCGGTCAAACCGGTGATCGGCAATGATCATATTCATACCAACAA
TCTTCTTGACACCACAAGGACCACAAGGTTCTTCGACGGCAACGTGACTCCCAAAAGCCA
CTGTGGTTGAATTCGACCATCAAAGGTCAAATTCTAGGCTTTCATCCTGAATGACAAGTC
CGAGCATCCTCATTGCATAAGCATTCCCTCGGCGTCAAGTCGTCAACCATAGGTTGCATT
TCATCGTCAAAGGCAAACTGACTGAAATTTGAGACCAAAGCCCATAAAGAAGTCTTCTGC
ATGCATCTCGCAACGTCGCGTGTATAAACCACCGACAATAGTAATCGGATCTGGATGAAG
GGACCATATCACAAAGACCTTTAGGTCACCATCGCAAAACCCGCATGAATCAAGCATTCA
AGTTTGATGAGTAATATAAACACATAACTGTGGTTGTATAAGAAGAAGTTGCCCTTCAAG
AAGTGATATGTTTGCCCTGACTTACCTAGCTTGCCATGATGCTCTCTGTCTTCTGCCTAC
TTGATGAATTTATGCATAACCACTTCACCTACAACACAAGCCCAAAATCAACAACATAAA
TCACACCTTGACACAAACTGCATGTTGTTCTGCCCACATCAATCTTCACATTCTTCTGTT
GTACTCCATGAGGATAAATCAGTAACCATGAGAAAATATTCTCATTTGGCTTTTTCAATT
CAGCAAAGAAGAAATTTTTTGCTTCCCCACAACCAGAAGGAAAAGTCAATTCCCTCGTTC
GTACTTCTCCTCCTAGTCGCCAGTCGTCTTTCTTCTTCCTTTCCGCGTGCCAGTGCCAGA
TCCCCCACCTCGCCGCCTCCGATGACCACAGACCCCTCCGCTCCTCCCTAGCCCACGCCG
CCCCCGCCACCTCCTCCTCCTCGGATGGAACCCGCGGCGGCGCCGGCCTCCCCTGCAAGC
CCTGACGGTGGCCATGCCGCCGGCACCGTCCGGCGGCGCCAGTACGCGGCGCTGGGGCTC
ACCTTCGCGGCCTACGCGGCGTTCCACGCCTCCCGCAAGCCGCCCAGCATCGTCAAGGCG
GTCCTTTCCGCCGAATGGGCGCCGTTCACCGGGCCCGAGGGGACCCACCACCTGGGCGAG
CTCGACGTCGCCTTCCTCGCCGCCTACGCCGCCGCCATGTTCGCCGCGGGCCACCTCGCG
GACCGCGCCGACCTGCGCGTGCTCCTCAGCGCCGCTATGCTCGCCTCGGGGGCCGCGTCG
GCGGCGCTCGGGGCCGCCTACTTCCTCGGCGTCCACAGCCTCCCCTTCTTCCTCGCCGCG
CAGGTCGCCAGCGGCGTCGTCCAGTCCGCCGGCTGGCCCTGCGTCGTCGCCGTCGTGGGG
AACTGGTTCGGCCACGCCTCCCGCCGCGGGACCATCATGGGGGTGTGGAACTCGCACACC
TCCGTCGGCAACATCGCCGGCTCCGTCCTCGCCGCCGCCGTGCTCGAGTTCGGGTGGGGC
TGGTCGTTCTTGGTGCCGGCGTTCGTCATCGCCGCGCTTGGGGGCGTGGTGCTGGTGTTC
TTGGTCGCTCACCCGGGTGATGCTGGCTTGGACCTGGATGCCATGGAGGTTGAGATGAGT
GGGGATGGTGGGGAGGAGGTGGAGCTTCTTGTAGAGGACAAGAAAGATGTTGAGGTGGAT
GACGATGGTGAATTGGAATTGGAAATGGGATCTCAGCTTCCTAGGGCCATTGGGTTCTTG
GAGGCATGGAGATTGCCCGGTGTCGCGGAATATGCATTCTGCCTCTTCTTCTCCAAGCTT
GTTGCTTATACCTTCCTCTACTGGTTGCCATTCTATATCCGGAACAATGGTATGTGCATA
TATTCTGTTTGTCAATCCTCGTAACGATAGCAAAATGCCACTTTGTTATCTACTGCAGCT
GCTTGCTGATTACTGTTGGACATTTGGTGAAATGGGTCAGGATTAGTTTGAACTGCTCTG
AACTGTCAAGCATTCATCCTACCTTAGCAACTTTATATAGCAGTAGTTTCATTTTCATGT
CGTGGTTAGATGGCATTTCTTATTGGACAACATAATCTGTAGCTCCGTGCACAATCAGAA
ATTTAAGTTCTACAGAAAAACCCTTTGTTTATGCAACGTGATGGAGCTAATTGAGTAACT
GATGTCTAGTGATTCTTAGAGATCACCTTCCAATTTGTTTTGGGCATTATTTTCAGCATT
TCTACCTATATATAAGTAGCTATTTAGCAGTATTGGTTTACTGAGCAGTTTATTGCAAGA
GGTTAAAATGTTTCATGTCAAAACCCTTCTTTTGTGAGTGAAATGAATGCTACCAATATA
CATGGACTCCATGCATCATTTTTCTGCCTAGTTTTACAGGTGTAATTGACACCGGTGAGG
CACTGAGTGATCTAGCTTGTAATCTTGTGTAAACTGCCGATGCTTCCATCGTTTTGTTTT
TGTAAATTAGAAGTGACAAGTGCCATTGGGAGGTTATTGCTACTTTGTTGCAAGCATTTT
TCATTCACTGAAGAACTTCTCCAGACTATCATTTTGAATGTTAGCTTAATCATGATGTTT
ACTTATATTACATTTTACAATGTTGCAGCTGTAGCTGGCCAGTTCTTGTCACACAAGGCT
TCAGGAATTCTGTCAATTGTATTCGACATCGGAGGAGTTCTTGGAGGGGTTTCCGCTGGT
TTCCTCTCCGACGCAATCGGTGCCAGAGCTATAACATCAGCTCTGTTCCTCCTCCTCTCA
ATCCCCGCTCTTATCCTTTACCGGACATTCGGAAGCATATCCATGCACCACAACGTCGCC
CTCATGTTCATCTCCGGCTACTTCGTGAACGGCCCCTACTCCCTCATCACCACCGCTGTC
GCAACGGATCTCGGCACCCAGGACGCAATCAAGGGAAATTCACGGGCACTAGCCACCGTC
TCTGCGATAATCGACGGCACCGGCTCTGTCGGCGCAGCATTGGGGCCCTTGCTGACGGGG
TACATCTCGACAAGAGGATGGAACAGCGTGTTCTTCATGCTGATTGTGTCCATATCCCTC
GCCCTCGTGTTTTTGATACGCATAGCGAGGGGCGAGATAGTCGCCAAGATCGGGGCCAGG
CGTTAGGTTTTATTTGCTGGCGCCTCGGAACCGCGAGAGGCCTTTTTCGCGGGAGTTGTA
AAAGTCTGTAGGAGTTAGGTTAAGGCCATCTCTTGGTTCATGTAAATTGGTTGGTTGGAT
GCACATATGTACACCCGTGGAAATGGAAGGCTGGATACAGATGCTGTTTTTCTATTTGCG
CCATAGTACCTCTCAGCAAGGGGATTAACAAAACATCACCATGTCATCTGTGTTTGTTCT
TGATTGTTTACTGTTTTTCCGGTTGTAGATTGTTCAACTACCAAAAGATTGTTGTGTGCA
AAGCAACGTTTAGGATATCTGTAACTGCCTAACTGGTACCGTATCTCGGTTGGGTGCTGA
GTAGGATAAATAGGCGGATTTTCCAGCTATTCGGTGACCCGCAATGGTGCAAAGTATGAG
CCTCCCTGGCAACGGTGTGGTGTCATTTTAGTCACGCCACATGATTTTTGTCGACGAGGA
GAAGAGTTGCCCTAGCGGGGGTGGCTTTACTACATATTTTTGTTACACCATCCCTAGATA
AGAAAGACATCCTCTATGTATTTTATTCCTACTAAGTCATGATCAGAAAATTACTACCAT
GCCTGACACGGCACCATCTCATGCTAGGCATACCGAGGATGGTAAGTTGCCGACGGTGGA
TCCGGTATGAGCTTCCTCAGAGTATCTTCAACAGATCGCGCGGCGTGTTTTTTTTTTTTT
TTTTGCACCGATGAAATACTGTTTTACCAAGCGCGGGAAGAAACAAGTTTTGTGTCCTCC
ATCCCAAATTTTTTGTTTTAGACTTACTAAATACAAATGTATCTAGTTACGTTTTAGTGT
TAGATACATTCATATCTTGAAAAATCTAAGACAAAATTTTTGAGACGGAGAGAGCATTAA
ACTATAAACAAAAGAACAAGTTATCACTTGAAACACAAAAGATATGGCATAAACATAAAC
ATGGAACATAAAAGAAATGATATTTACCCTATCTCTATCGTTGTGCAATTTGGGTTTATC
TTATCAACCGGCGTCATTGCCGCCGTCCACCTTTGACAATCTCTGTTGATCGTCGACCAT
CGAGAGCGAAGAGATCTATCGATGCGCTCAACTCCATTTTCGTTTTGTGCATCAAAGTAC
TCATTCATCATAAACCAGTATGTATCTCTAACTTGTTCACCCGTAATGGTGGCATCCATA
TACACATTCAACCATGTCTTGCATAGCAAGATGTCTTCGTCCATGGTATAGTTGCACGTC
TTTCCTTTCGATGCATCAACCATACCCTCACCCTCCTCAGCCACTTCATATTCATGATAA
TCTTGATGCACTTCACTGGTTTGAGACCAATGGGAATTGCTGGATCCAACTACCATAGTT
AACAAATATGTGTCATCATTGAAACTGCAAAGTATGATAAAGAAAATTAATCAAGCTATC
CATGTGTACACATTTATCTAGCAACAATAAAAAAAGAAGGAAAGAAAAACCATACCTTGT
GGGCATTTCATCAAACACCATGTGCGCATCGGTCGCCGGCGCACTAAATTCCGAGCCCTC
TCGCGCTTCGGGCGGCGGAGGCACGACCGGAGGCGCTACTGAGTTACTCTCCGTGCGCGT
AGAACGTCGTCCACTTTCTTCTTCTTTTAGGCCATCGTCGCCGCTGCCGTCATCTGTCTT
TTGGAGACTGAGCTCTGTGGCTGCGCGCCGGGCAACGGCCCGACGCTACCCTGTGAGTTC
GTTCGAGACACCATGAAAAGGCCGCACGCGAGACCGGTGCTTGGAGTCGGTGCAGCGTCG
ACGACGAAACCGAAGGTCAACCTCGCGTAAGGGTTTGCAGCGGCGACGGAGGAGAGGAGG
ATGAGGGGTCGCGTGTGTAGGAAGGGGATGGGGATGTCGACACGGTCGTCCATCGCAGAA
AGTTCATCGGCGG