Contig Data
morexGenes
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Map Locations of contig_137865 (4999 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137865

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6657 1 161 bp AK358088 Not available Available None
MLOC_6658 1 448 bp MLOC_6658.1 Available Available None





CDS Structure of MLOC_6657






CDS Structure of MLOC_6658






Contig Sequence (4999 bp)

>contig_137865 4999 assembly3_WGSMorex_rbca.fasta
CACCACTCCCACTGAAGATAAATGAATCTAGTTGACAAACCAAACTGATAGACCGGAGAG
AGATACAAAGCTATAATAATAATGCATAAAGAATTCAGAGAAAACTCAATATATTTTCAT
GAATANNNNNNNNNNNNNNNNNNNNTTCATCAGATCCCAACAAACACACCCAAAAAGGAT
TACATCGAATAGATCACCGCGGGAATCACGGTGAACTTTGTATCGAAGAACATAGAGAGA
GAATAAGCCATTTAGGTACTAGCTATGGACCCGTAGGTCTGTTGTAGAATACCCACACAT
CACCATGGGAGCAGCAAGGTTGATGTGCATGCCCTTCGTGATTGATCCCCCTCCGATAGG
ACACCGAAAAAGGGCTCCAGATGAGATCACGGTAGAACAGAGACTTGTGGCGGCGGAAAA
AACTATTTTGGATGGATCTCTGGTGTTTTCCCAATATTTTACGATTTATAGAGGCGGGGT
TTGTTCAGGAGGCGTCGGGAGGTGGTCCCAAGCCATCAGGGCACAACCACCACCCCTCGG
CGCGCCTTGTTGGCTTGCCACCACCCCATGTGGCCTCCGATCTCTCTCAGAAGCTTCCAA
GTCTTATTTTTGTCCAGAAAAAATCACTAAAAAGTTTTGTTGTATTTGGATTTCGTTTGG
TACTGATTTCCTGAAAAGCCAAAAACACGGAGAAAACAACAACTGGCACTAGGCACTGAG
TTAATAGGTTAGTTTCCAAAAGATATATAAAATAGCATATAATGCATATAAAGACCCCAA
AAATGATAATATAATAGCATGAAACAANNNNNNNNNNTAGATACGTTGAAGACGTATCAT
ATAACCATAGTGTGATCCACCAAAACAACGACTTCAATAAAATTGCCATCCACCCGTGTG
CAACTAAAGTTCCTGGGACCAACCACAAGAGACTTCAATCTCAGGTACACCTCTTTCTGC
GGTCTCTCCATCACTATTCACAAACAAATTGACTTCTTTCTTGAGCAAGGTCAACCAAGA
TCTTTGAATGTTGGCATCACCTTCGAACATATCATCAAGGCAATCCCACACTTCCTTGGC
GGTCTTGAAAAGAGCAATGGAATCGCTATACTGATCGGTGACTGCAAGTCAAAGCATGTT
GAGGGCGGTAGCATTGAATTGATCATCAATGGCTTCCCTTTTAGTAAGGCTTGAAGGATC
ATGGGGCTTGAAGCAATTGAAAGTAACCTACCAAAGTTGTGTTGCATTGCGAATGTGAGG
CTCCATAACGAGTTTCCACTAAGCAAACGAGTTAGCCTTCAATGGGGGTGGAGCCCCAAC
ATGATTAATATGCACACGAGGGATAGGTTGTGGCGAGTAATGAGGCTCTATGGAATAGAG
AGGTGTGGTGGTAGGCTTGAGATAAGTGAGAGTTTCTCTCACATCATCACATCATACGCA
GTAAGATTATATGATATACCTGAAATAAGCTCAATTTGTATCATGTGTACTTCAGGCATT
GCATATAAGAAGATAAGAATCAAGATCATTAGAGAATACATAAACACTTCTTGATAAGGG
CAATCAGCCCTTTTTGATACAAGAGTAGATTGTCATACAACTCTTTTTGATGAAAATGCG
CACTTCTAATGATAAGGACTTGATGAGGACAATCAACTCTTTTTGATACACGAAGATAAG
CATGGCGATCGTTAGACAATACGTAAACACTACTTCCGCCACGCTTTCAATTTTCCACTC
TAAATCCAGGCCATCCTCCGCCTTCCTATATGTTTCCATCTCTTTAATAATAGCCGCTGC
AAAATGAGAACCGAAGCGGTGTCAACGAAATGAACATGTTTTTCGATCAATCACGCTTGT
TTATATCTGAATAAGTATCCTTTCTACCGGCAGATGCAAAGAAGGGAAACTGCAATGTGA
TCAGTGTGATGCACCAGCAGAAATCATAGTTTGTTGGAGCAGAAAAGAAGAGGTTTCAAT
ACCGAGCCAATCGAACTCCTCTTCTGCATCAGCTGGCTTGCTGCTGCTGCTCGCGTACTT
GGACCAGCTCTCGGAGCTCATCAGCGTGTTGTACGCGTGCTTGATCCTAAGAAACTTCTC
CTGGGAATTCGCCTGCATTGGACCAGGAGTTTGTCAGCAAAATCTCCATTAGAAAACAGT
ACTGAAGCTATTTCCATCGCTGAATCCTGCTGCTTGGATTGGATATACGAGGGATCACCT
CCTTGTTGACGTCCGGGTGGTACTTGAGCGCGAGGCGCCGATACGCGCGCTTGATCTCGG
CGGGCGACGCCGACGGCGCCACGCCCAGCACATCGTGCGGGGCCTCCCTCCTCGGCCCGC
CTCCGCTTCCGCCGCCGGCGCCCGCGCGGACCCGCACGCTCGCCCGCCGCGTCAACCGAC
CGGAGCCGGAACGGCGGAGAGGGACAGAGGGCGCCGATACCGGAGCATACGCGAGGCGGC
GTGAGAGAAGGAGGACATGCGGGGCAGCGACGGCGGAGACTTGCACCGACGGCGCCATTG
CAATGGGGTTGCGAGGCGCGTGGCGAGCACGTCCTCTGCCGTTCAGATCGACCGGCGCAG
AGGATCCAACGGCCGTTGTTATAAGCTGATGATTAGCAACCTCTCGATGTGTCAACACCT
ACCTGACTAAACTTCAAAAAAACACCTTCCTGACTATACTTTTACGCAAACTCTAATCTT
AGCTGCCCATGGATAGATCCTGTTTATCGAAGGACAAAAAATACAAGATCATATTTTAAA
TAGGCGAGTACTCTGCGCCGGCGCGCCGGCCCAAAACTTTCGGTCGGCCGCCTGGCAGCC
GCACGATCCGAACGTTCGTAACCGTACGATTAATTTCGCGAGGCGTCTTCTTTTTCTCAC
GCAGCGCCTGCTTGCTAGTCGTCCCCGCACGACCTCCCACTTGCAGCTCCCGTCGCGCCG
CTCGTTGGTTCACCGTTGCTGCACGCCGTCCCTCTTCCCGGCGTCTTCCTCCTTCCTTTC
TCCCTCCTGCAACGCTGGCCATCCAGCAAAGACCATCCATGGTTGAAGCATCTCCGTAGC
CGCTCCAGTAATGCCGACCATGGTCGTAGCATCTCCTGGTCGTGGATGAAGCTCCCTCGT
TCGTCGGTTGAAGCTTTTTTTTGGCCGCTTGCAGCTTTCATCAACGTTCGGCCATGATTT
CCTTCATTGCTGGTTGAAGCTTTTTGCGATGCCGGTTGTAACTTTTTGCAATGCGGTTGC
ATCATTTTTGGTATTGACAGTAACTAGCCCTGGCATATGTTGTCGTCGTTGAAGCTTTTT
GGGACGCCGGTTGAAGCATTTTTGGAAGCCGGTTGTAGCTTTTTGCTATGACGCTGGCCG
GTTCCAGCATTTGACGTCGCTGGTTGCAGCTTTTTGCGGTGCCTGTGGCAGCTTCCTGGA
ACACCGGTTGTAACATGGGAGGTGTCGGTTGTGCTCCCAGCTCCGATGAGATTCTCCCCG
TAGCAAAATGCTCGACGATGTCGTCAATAGCAGCTCATAGTCGTCCCTGTCGTCGTCCAC
CCCAAGTTTATAAGCCATGGCACCCACAGCAGCTCGTAGCTGTCCTCCGTCTCTGTTCGC
CCCGAGCTCGTAAGCCATGGCGGCCTTGACCTGTGAGCTCAAAGGCCATGGCGCCCTGTC
ATAGCAGTGCTTCGGGGTGACGATCCATGGGAGCAGCGTCCCCATGGAGGAGGTGCAGGG
CAAGGTGCGAAGGAAGGACTGCTCGAAGCTGCTAAGGCTATGGCGGAGAAGGCGAGGCGG
AGCACTGCGGAAGAGATAAGGTTCAGATGAGAAAAATATGTGGCAGAGAAAGCAAGTGGT
CGGTTAGATCATGTTTAATCCAACGCGCCGCGTGTGACCGGTCAAATCACTCGGCCGGCA
TGTCGTACAGAAACATTTCCCTTTTAAATATGGGAAATTATTTCCTTCAACCAACCGATC
TTACATAAACGTCCATCATCTTCGTGTTCGTTGGATGAGCTCCCTCAGATATCCGTTGGA
TGAGCTCCGCCAGATAGTCCGTGTCCACATTGTGCAAGTGGTCCATTGCTTTAAAAAGAG
ATTCTGCAACTAGTTCCTTGTTGCAAACCGTCCAAATGCTAGATACGATCGATGTTAAAA
AAACAAATTTGGCAACACGACCCATGTTGAAAAAAAATCCGTAACACCACCGATGTTGCA
AATAAAATCTACAACAAGACCCATGTTGCAAAAACAAATTCAACAACACAACCCATGTCG
TAAAAAAACTCGCAACATAATCTATGTTGCAAATGTTTCCGTAACAAGACATCTGTTGCA
GGATAAAATTATCAGATCTGACGACTTGCTAGGTGACTGATATTTTTAAAAGATCCAACG
TCCGACATGTAGCAGGACTCATAAAAAATTTCAGGCAAAAATAACGATTCGGTGATTTTG
CAACAAAGAAACTGTTGTAGAATGAGTTGTGTAACATCTACTTTGTTGCAATTCACGACG
CACCTCATTGAGAGATCCAACGGTTATTTATGGCTCAATCCAACAGCGAAGGAGGTGGTG
GATGTTTTCAATTAATCCACTACGGATGCGTAGCGTCCCCCTTTAAATATGCAAGATTTT
TCATGTGAATTACCATCATTACCATCTTTTTCTTTCTTTTTTTGCAAGAAAAATTTCAAT
CTTTTCATCATTTGAACAAGTACTCAGCTTATTTTAGATACTTCCTTTTCTCCTCTTACC
ATGCAACTTCGCATCACTGTTGTACGCGCGACTGTGATTGTATCGATGGGGGTGATACTC
TTCTTTGATTTCCTTGTGTGATAATATGTGCCTTTTTTATGCTGCTTTGTGTCCTCTATG
TGCTGCCTTCCCCATGCCCTGGATTGCTCTGTGTGACTCCATTGTTTCATGTCGCTGCCC
CGCCACCCCCCACCCCCACCCCCACCCCCACACCCACNNNNNNNNNNNNNCCCACAACCC
CACCCCCACCCACACCCCC