Contig Data
morexGenes
Links



Map Locations of contig_137851 (5817 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137851

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6647 2 1441 bp MLOC_6647.2 Available Available LOC_Os01g61310.1, FRAME:-2, EVALUE:6e-76, 13101.m06523 protein DUF640 domain containing protein, putative
MLOC_6645 1 1252 bp MLOC_6645.1 Available Available None
MLOC_6646 1 566 bp MLOC_6646.1 Available Available None





CDS Structure of MLOC_6647






CDS Structure of MLOC_6645






CDS Structure of MLOC_6646






Contig Sequence (5817 bp)

>contig_137851 5817 assembly3_WGSMorex_rbca.fasta
CCCCCCTCACTTCCAGCCCCGCCATGTGGAGGAATATTAGCCCCGGTTCGGGGCTGAACT
GGGGCTAGCATTAGTCCCGCTTTGCTAGCCCCGGTTCGTGAACCGGGGCTAAAGGCTCAA
CCGAACCGGGTCTATAGCCCCTTTTTCTACTAGTGTGAAAAAGAAATGAAGAGGAAAAGA
AAGAGCGGAGTAGCCACCGAGTGACAATTATTTATTTTGAAATGGAGACAAATATTTAAG
TGAAAACTCTTTTAATGAAATAGGCTCTGATTGATCCAAGCCGTACTTCTTTTAATCTTA
CTAAACCTAGACGTCTCTTTTTTACTATTTTAATAGTATAATTGGTAGATGATGCATTTT
TTTAGAATGGTACATAAAGATGAACTGGATGATGCTGTAATTGTGCTAAAGAATCCCTTT
GCAGGTTATCACCCTACTTGGCACACACACAAACACTTGCACACACCACACACAAATGCT
CTGACTTAAGACACACCAATAACCGATGAAGATCATGAATAAGTGCTCAAATCATTTATA
CCCCAGGGGGCGATCCATGTTGAATCTTATTTGATCTAGTTTTTATTGCACAAGCCAAGA
TAAGTTAATTAAACGAAGCAATTTGGCCAAAAGGATAATCAAATCTATTGTTAGCTTTTT
GAAAAAAATGAATTATTGTAAGCTAGCATGCATATTAACGAAAATAAGATAAGTGACACA
ATACATGCTTAAATAAGCATAATGTACATGTATTCTTAATTTGAGATCGAATAATTAAAG
AGTTTCTTTTGGTTTCATCAAATCAGTCACGTGGAATTTGGAGTTGTGTTGAGAGATTGG
ATATATTTTTTTACAATTTTCCAGGTGCAATATATGTATGGTCACCACAATGTACATATA
TATTGATCCTTTGTACATAGTGATAAACGTAATACAGAAAGTCTGAAATGAAAAAAGTTT
GTGGAAAATAAGAACATTCCCATCGATGCTCTTATGCATCTCCCAGTCGAATCTTTCAAG
GGGTGCTTGTTCATTAGGGGCGACACAAACGCATACATAAAATTGCCTTGGTTTTTCTTG
TGATCTTATAATTCTTGGCACGCATATGCAAGCCTAGCAGCGCTACGCTATTTCTGAGAT
GGCTTACACTGTCATGGCTATGAATACAAACAAGAGGAGAAGGAATTGAGTAAACATATG
TTGATGTGACAAAGAGTAAGTGAGATGTAGTACGAACTATGATTTGATGACCAATCAAGC
ATTAAAACAAGAAGGACGATCTACCATCTATATACATATTTGGGCCAGATTTGGGAAAGA
TATTCCGCCAACCGCATGCATATGCCAACAACAAATGGATTATAGTTTAACAGCAAAGGC
TAACCAACCCAAAATTCTACTTGCCTGGCAACCACAAAACCATACTAATAAATTGATAGA
TCGAGGAGCATCATGATAGGTGTAGGGTCAGTTTGCTTGCCTCAGCTTTAGGAACAGGAA
AAATGCTTGTGCTTTTCTGCTCGATTGGGCACATCAGTACATATACTATATTTTATTCTT
GATTTCGTGTGCAAAAGCATCTGCGTTCACACATACACACAAGCAGATTAACTTATTAGA
CTACACAGCAAAGATCAGAAGAGTGAAGAGAAGAAGATATTGCATATCGAAGCATACCAC
CAAGCCCTGCATTTACCGGGCGTATATATTAAGCAAGTAGTATATGTGTGGTCCGTGACT
TGTATTGCATGTAACAGAGCAACCAACAGTACTGCGTCTAAATGGATAACTTAATTAGCG
AGTGAAAAGAAACAACAGTAGTTGTGAGATCAACCTATGGACATGACAGCAAATACAGTG
ACAACAGACTAACTTATGTTGCTCAATATTTTAGATAGCAAACCGAGATCTAGTTAACAA
TTTTAAACAAAGGTTGATATGATGGATATGTGGATAAATGGTGGCTTTTACAGTTCAAAG
ACTTTTCTGTTGCCTAACCAAAGGTATCAAAATCATAACACAATCATCATTGATGGAGAA
TCCAAGATGCCTGTCACTGAAAAGAAAATTCCCCCGTATCAAAGAAAATGGTTAATTAGT
CAGACATCGCATTCCATGATTATAATGGGTTGAACACACTCAACACGCCAGCTATAATTG
AGATTACTATAAACTATAAGGTCGACAGTAATTGGACAAGGATTACCTCCATTAACGTGC
ATTACCTTATTTTTTTCCGGAAAGAAGGATTTTCCCGGCATCTGCATTAGAAGATGAACA
CATCTTTTTCTTTTTAGAAAAGGAGGAAAGACCCTCCGGCCTCTGCATATGCACACATCC
ATTGACACGCATGATGCAGCAGGTAGAGCGATTTTGCGTGTACATACATACTACTGTGGA
TGGACAGGCACGACACAGGTAAGGTGAGTACAGCTGATTTCAGGAAATTAATTAGGATTC
CAATAAGAGCACCAGAAGTTAAGCCCTTGTCTACCCATATATACGGGCAAGGCAAGGCAG
TGACCTGTATATATACGCGCACAATAATTCCAGACAAGACCTGACATTTTTCTGTGGGTT
GAAAGCTCTCGTACAAGCACAGGCCGCATGTGATCCATCTATCAGGAAAGAATTAATTCA
AGGAGGAGCAGACCGCGACCGTCGTTCACGGTGGCGGCAGCACGAGAAAAAAGGGGAAGA
AAAGAAAAGAAGACGGTGGGTATCTGTGGCCATGGGAGGCGGCCGGCAAGGCATGCATGA
ACAGCCTCGCTACAGTGGCGCAGCGAGGGAGACGAGAGAGAGAGACGTACGGCCCCCGTT
GGGTGGGTGAGGGAAGAAGGGAGGAGGGGCCCTGTGCGTGCAAAGGACAAAGGAAGGGAT
TCATTGCATGGCTTTGCTCTTTGCTCACAGTCACAGGCCAAGTACTGCGGTCAGTGTGGA
CATGAGAGCAAAGCATCGCCGTCGCGTGGCCCACCCGCCACCCTTTGCTGCGAAAGGGAG
CTTCAAAGGCTAATGCTAATTTGCTAGTTACATTGCTAAGGGGTAGCTACTGTTCATCTT
CTTCCTCAGAAAGCAGCTACAGTTACTTGGGTAGATCTACCAGGAAAGAATCCTACTGTC
AGGGAGAACGGTGTGGATCGCTAATGGTGCTTAATTACCTGTCTGCTCCCCGTGTGCTGG
CCATGGTTTTGCACTAACAGATGCAATTAAAGTGGAAAAGGAAGCGGATGAGCGAGAGGC
AGAGAGAGAGTTGATCTGATCACAGCAGCATGGATATCAAGCCGACTGGCATGGGGCAGT
GCCCATGCATGCAGAATCGAGCAGGTGCACGCGTGCGCGCACCTGTGAGAGAGGATGGCC
AGCCCAAATCAAGGAGCGATAAGAGAGAGGACGACGGCACTGAAGACTGAAGAGCAGTGC
ACGTGTGGTCAGAGAGTGAGGTACTCGATCTGCGGCTGCCGTGCGTGCCTCCGTATCCTA
CAGTCCCATCCGATCCTCCGGCCGGGGACCAGTGCAGCTATCTCCTCCCCCTCCCCCGCT
CTTTTCTATTTAAGGCCTCTCCGGACAAATCCCCTCGCGCGTGCATGCCTAGCCCTAAAT
CTCTCCCTCCCACCCTCTCAAACCGCAAGCACTATTCATGCAGCTCCCTCTCGCCATTAA
AAACCGCAAGAACTGTTCATCTCCCTCGCCGTTACAAACCCCCCTCTCTCTCTCTCTGGT
CTCTGTCTGAGAAAGGTTCCTGCAGCTGTGCGGCCCGTGGCATGTAGGGCATGGTCAAAT
GGAGGAGGAGGGTATGTCAGAGCAAGAGATTGGCCGGTTGGGGAAGAAGGCCGTCCGGGA
ACTGTTGCGCGCATGTGTGCCAGTGAGTGATCGCGTACTGCCATCAATGCAGGCTGGCCT
AGCTTCTGCGCGCTGTACCCCTCTCTTTTCCTTTGCACATTGTCCATTCTTCCCTAGCGA
TCTACTCCAGTGGCAGCTAGGAGAAAAATAGAAATTACAAGTGCTTCTGCAAATTAAGCA
ACAAACGCTTCCAACGGTATACTAGAAATATTATCATGTGCAAGAATTGATTATTAACTT
GCAATGGATGTATGAGTGAGTGCACCGATCACAGTTTGCTACATGTATTAGCAAAAATTC
AACAGCCCTAATAAGAGAAATGCAGTACTCGATCACGCTGAGACGTAGGTAGCATAGGAA
GTAAGTAATATATATGACCACAAATCTCAATTTCTTAAATTACCAGGATATATATGGGAC
AATGAACAATTAGATGTGCCAATCAATTCACTTCCCCTAGAACACTACTACTACTACAAC
GCCATGTAATAGGAGTACTTATTATTAACCTAATTAATCTGAAAATGGGATAGAAAATTT
TAGAGGTAATATAGGCAACAAAGCATACCAAAGGGAAATCTCAAATCTTGCTATGCCTAT
GCCTGGCACGGTAAACAAACTAATAGACAAGGTTTGCAAGTCTACTATACTCAAGGGATG
CTCGGTGCAGTGCTGCCACCGTCTCTAGCTCCAGCCTGCGCGGCGGACGCAGCGAGAGCA
CCATCGCCGGCGCTACCCTCGACGTCCCTGCCGAAGACTGCTGCGGTGCCAGCCGAAGAA
CCAGATGCCTCGGCGGCCTGCGGCGCGCGCTTCCGTTTCTTCTTCTCGTGCGGGATCCCG
CGCGCCTTGGCGTGCGAGTCGCGCACCTCGCGCAGGTAGATCCGGACGGCCCGCGCGGCG
AAGGGGTTGGACTCCGGCGCGCCGCCGCTCTCCTCGTAGGCCGCGCGCAGGCGGCCGATG
AGCGCGTCAAGGGACCCCCACGCCTGGCGCAGCGGGCACGGGCATGGCCCCGGTGGGCTG
GGCTGGCCGTAGTAGGCGCAGCCGACGGCGTGCACCTTGGTCTTGCCGAACTGGTCCAGG
TACCTGAGGAACTCGATCACGTGTGCGCCGCTGCACCGCGCCAGTGTCAGCGGCGGCTTG
TGGTTCCGCAGGTACTGCAGGAACGTGTTCCAGTCCCGGCGCTTCTGCGACTCGTACCGG
CTCAGCTGCGCAGGCGGCTTCGGCGCAACGTCCGGCGCGCCGCCGCCGACGACGGCGGAG
GATGACGTGCCGGGGCCGGAGGAATCCATGTTGAACAGCGTCCGCGGGAGCGAGCAAAGC
TAGCTCGACCGGCGCGCGATCCGGTGAGTGAGTGATCAGTGGACGCGCACCCGGAGGGGT
TAAAGGATATCTTGGGGTGGATGGAGATGGGACGTTGGAAAGGGATGTGAGCGCGGAGGA
GAGGAGAGAGCGACGGGGAGCCGAGGGGGGAGGTGAATGTGTTACTACTGAAATGGAGCG
GAGGCGCGCGTGAGGATGATGGTCCATTCAAGCGCAGTGACCCCAGCCCCGTGCCGGAAC
AATTCGGGCCGTATAGGGGTGCATACCTATGCGAAGTATACCTGGTGCAGGTATCTAGCT
CCCTGTAGCTCGTGTATTTTCTTTTACACGGTCGCAAGTGTTCATATAAGCATGCATACA
TTCATCTTTATAAACACACACTCTATTTAAATGAGTACTAGTACATACAAATGCACGTGC
GTTGCACCGGGCTAGAAAAAAAAAATGCAAAACCTACTTGTTTTTGTAATTATGCGGCAT
TAACTTTAATAAATGTTAATTATAATGTTAAATGTAAGGCATCTATTTTTGGACGGAAGG
AGTTTCTTTTAAAGTTTTAATTTATGTGGGATGAGTTACAACAGTAACAACAATGAGGGC
AATTCACCCATTTGCTTGTGACACAAATACTGCAGTAAACACAATAGCAAAGGAAAA