morexGenes - Barley RNA-seq Database

Contig contig_137745
Source Contig contig_137745
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137745 (8109 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_137745

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6572	1	581 bp	MLOC_6572.1	Available	Available	None
MLOC_6573	1	902 bp	AK364088	Not available	Available	None
CDS Structure of MLOC_6572

CDS Structure of MLOC_6573

Contig Sequence (8109 bp)

>contig_137745 8109 assembly3_WGSMorex_rbca.fasta
ACCCATCTTGAGGGGGAGTGTTGAACCGGTATGGGCCCAGCCCATCCACTTATCTCTTAG
GGCCCAAGCCCATGTAAAGGGACTGACCTGGAAGGAGGCTCCAAGCCATCCCGTTCCCAT
CTGGAGCCGCCACACACACACGCGGGACACCAACTCACGCGAGGTACTGCTCTTCCTCTC
GATTTCAACACTTTTTACCAATACCTATTAATTTTAGTTGATGTAAATCACAAAGTGGCT
TACCAAAAGTCAACAAGTTGCAGTTATGTATTTATTCAAAATAGCAATCCTGCATAAAAC
TCATCAAATATACCAGAGCGATGGAGTTGTGTCCAGTTATTAAACATATGTCAAACATTG
ACACTAGCTTCATCAGATAAGTCTTTGGCCTTCATTCTTTATTGATGCCAATTAATCGTT
GGCTTCATTCTTATAGCAAGACGATAACTCGAGGAAAAAATGCTAAACTGACATGGCATT
AACTGTTTGATAGGAGACATAGTTACTACATGACTCGACACTCAAGCACCAATGTCTTGG
ACATGGAGACTGCCTAGTAGAAGTGTCAGTGTGACCTAGCAATCATTCGAAATAAACTAC
AAAAGAAAAAATTACAAAGAAAAAATTGCACTGAAGTAAGCAGATAGCAGTTCTTTGAAT
ATCCAGTCAACCCACTATTCAATGAAGTGGCATAACAAGGATGGTAAAAATTTAAGACTT
GTCTTGTGTCTCAAAGGAAACAAAGTTCGTGCTAGATACACTCTTACAAGCTATGAACTG
TTGGCATTCGTATGCGGAAGTACCATGGCTCACCTTCGAAGAATGCTGTACAGTTCAGGT
CTTGCTCTCATCCAATCAGAAAAACTAACTCCTGAAGATGTTGCTTGGTGAGCAGAGCTC
ACAGAATGTACATAGACAGCAAAACATATGAGGAAGTAATAACGTTCCAAGTACTCCACA
AAGAAGGAAAGTGATGCCTCCCGTTTCATCTCATCAGGTTGCCGAAGAGTGCTATTGCGG
TAGGTCGCAATAGCTTCTCTCAGGTTCTGTTCACAAGGACAGCAAGCACAAACATGAAAC
AATTTGATAAGGCTGCTTGCATTGAATTATCAGAATATAAAACGGCATACCTGCATAGAG
TCACATTTATCAATAACTTTGTCCACTTGTCTTTTGCCTTCAACACCACCCTGCATAAAT
ATCAGACACAAAGTCACTACTGAGAGAAACTAAGTTAAAAGGAGAACAGTTTAACATATT
CAGGTTATTGCCTCAAGAACTCGGACTAAGCTCCTAATGACAGCATATTCTCCTCTGAGA
ATTGCTTCTTCTGAGCTAGGACTGTAGTCATCTACATCATTTCCAGCATAGAAAACCTTC
CCAATTGAACTTGTCCTTGGGATACCTGCAGCAGAAAGCACCCCACACGTTAAATATCTG
GAAATCCAAGTATAGGTGTGAACTATAAGCACATAATGTGGTAACCATATAGTCAGACAA
GTACACAACAAGCAGGCTTTCAGTTGCCATCAGTATATAAGTACTAAATAATCTCGTGAA
AACTCAAAACATTTGACGATCATATAATTGTGCATGTGGAGCATTATATCTTGACCAGTT
CTATATTGATAACAAGCTGGTAACAAGGGCGCTCACCTGAAGCTCCTATCCGATTTAGGT
AAACCAAAGTAGATATGACCATACCGGTGGTAGTCCGTCCCCTCCCCATTTGACAATTAA
ATACAATTTCAGTCTCCATATCAACTTCAGAGATTCGACGTACCTGTTAGACACATCAAA
GGAAATTTAATTATATGTACATACTTTCCAATCTCAGTATTTTCATCGTTACAATAGCTG
ATTGTCTGCAGAATACAATCCCTGCTAAATGTGTTTCCTATTAACTGTGTCACAAGAGTT
GAAAATTAAAGCATAAAGAAATAGTGTGACTAGCACACAGATCTCATGGTAGACAGGCAA
CCTGGACGAGTGAAGGTTCAATTTTACAGCAAATAAAGTGAAGACATTGGGATGAGAAGT
TAGGTGGAGAACCTAACTGTGGCATATAAAACTAACCAGGTTATCAAAATCCCCTTCCTT
CGGAGCTTTCTCATCGGTAATAGGAACACGCTCGTAATCAACAAGGTATCCTTGATGTTG
TAACTCCTCATAGACCTGCAGATGAATTAAGTTTTTTCAAAAATACCAAGGAGAAGTAAG
AGGTATATTCTAAATCATCAACCATGGAGTTACCTCAAGTGGAGTCTTAACTGTATCGGA
TATCACTGACTCCCACTGGTCCACCATCTGACCATTCGGCAGCTCATCAGTAACTAGAAT
CTTATTCCCATATCTGCCCCATCAAATATTCCATTATAAAAAACTGCTGGACTTAATGTG
AACAGAAACGTAGTTTATCTTGCTAGTAATGTACCTTGAAGCTTCCTGAAGAATATCTTC
TTTCAAACGAAACTCCATCTGCTCCACTCTCTCCCGGTTGATTCCCTGTATTATATTAGC
AAAGGTCAAGGATTAATATGATAGGGTATCAACACCGGAATTACTCGATCTACTGATATA
GCTCACAAATTCGGTTCACAGGTAGCTATTACAGGGGAGGATACACGAATTTGGTGGAGG
GGAATCGGGGGAGAGGAAGAACAGGTGAGGTAGCCGCCGGCGTTGCCGTGATCCACTGGA
TGCCTTCTCCTCTCAGCGTCGCGGGTTAAGTAGCGAGCGCCCGGGCTTCAGTTGGCCCAC
GCTGGCCCGTGGTAGCGCGGGTTGGGGTGCCTGGACCGTGCGGGCCGTTGGACAGTGTGG
GCCTGGGGATCGCCGCTGCCTTGCAGGCCCCCTATGTCAGGTATGCTGACATCCCCCTCC
GCTTGGGAGGAGGCTTGCCCCCAAGCCTCTGCATGTGGGAAGCGCGCGAAGAGACTTGCC
TTGTCTTCCCAGGTAGGTCCCAATGCCGAAGAGTTGGACCATTGGATCTTGACTTGTTCG
CGAACACCATCTTTGTGCTTGCGCCAGCGAGTTTCCAGTATAGCTATAGGAACAGCAAGA
TCGTCAAAGCAATGTGGGAGTTGTGGTTCAACTGTCATACCCGGAAGTAGGGCGAGACGA
AGCAGCGACACGTGAAACACCGTATGCACTGTGGCTTGTGGGGGCAGATGGAGCTTGAAC
GCGGTGTCGTTGATCTTGGCGACAATCGGGAATGGCCCATAGTACTTGAAGGCCAGCTTG
TGATTTGCCCATGGCGCAACTGAAGTTTGGATGTACGGTTGGAGCTTGAGGAAGACTTGT
TCGCCGACAGAGAAGGTTCGAAATGATCGTGTTCCTTCATAATCTGCTGAGCTCTGTTGA
CGTGTTGTTGAAGTAGGTCTTGAACCAGAGGACGCTCGTCGAGCCAGGATTGAAGAGCTG
GGATTGAACAAACTATAGCAACCGTGAGTCCCCAATGCCGAGGTTCATTGAACAAACTAT
AGCAACCGTGAGTCCCCAATGCCGAGGTTCATTGAACAAACTATAGCAACCGTGAATCCC
CAATGCCGAGGTTCATACCCAAACATGGCTTTGAAAGGAGTCGTCCCAATGGCCGAGTGG
TGGGTGGTGTTGTACCAAAACTGGGCGAGGGGAATCCAAAAGCTCCATCGCCGCGGGCAC
GACTGCGTGAAGCAGCGAAGAAAAGTTTCGACGCACTGATTAACACATTCGGTTTGACCA
TCAGTTTGTGGGTGGTTTGTTGTGCTCAATCTGAGTTCTCTGCCCGCGCCACGGAACAGC
TCTTGCCAGAAGTGACTGGTGAAAACTGGATCCCTGTCTAATATGATTGCCCCCGGCAGT
CCGTGAATCTTGTATATTTGATGCAGATAAAGCTAAGCGACTGATGTTGTTGTGTATGAC
TGAGCCAGCGGAAGGAAGTATGCGAACTTGGTGCGTTTGTCCACAACGACGAGCAAACAG
TTAAACTTACTAGACTGCAGCAGACCGTCTATGAAGTCCATCGATATCATCTCCCACGAC
TGGTCTGGTATAGGCAGTGGTAGGAGCAGTCCCGGGGACGCAGCGCGATCTGGTTTGGCC
TGTTGACATACTTGACGGCAACGGGCGTATTGTAGGACATGTGTCTTCATCTTAGGCCAA
GCGAAGAGGCAGCGGATGTGCCGATAGGTCGCAGGGAAACCCGAGTGCCCGCCCACGGGG
CTGTCGTGAAAGGCTGAGATGATCTTCTGTTGGATTCCAGTGTTAACTCCCAGCCAGATC
TTGCCACGGAAGCACGGGATGCCCTGCTGCAATGAGAAACGCCCTTTTGGGTCTTCCCCC
ACGGCCAGTTGCCCCAGTAAATGCTCGGCGTGCAGATTGTTGATGTAACTGTTGGCAACG
TCCTCGAGCCAGGCCGGCTGACACGATGTGATAGCTGCCAGCTTGTCCGAGGGGTTGGCT
CACGACAACACGTCAACGCCAGCATTCTCAATGCCTTTTTGTAGCGGATGCGATAGTGTA
GGCCGAGCAGCTTGGTGAAAGCCTTTTATTGCCATAATGTCGTGAGGCGCTGCTCCTCCA
AATGGACCAAGCTCTTTTGATAGGTCAGGATGTCGAACTCCGCATGCTGCAAATAGGGAC
ACCACTGGTCAACAGCCACGATGATTGCCAGGTATTCCCAGTCGTAAGTGGACAGGCCTT
GATATCGTGGGCTGAGCGCCTTGCTCATGAACGCAATCGGGTGCCCTTGCTGCTGCAGGA
TGGCTCCAATGCCGCGGTCGCTGGCGTCCCTCTCAACTGTGAATGGCTGCTTGAAGTTGG
GAAGGGCCGGCACAAGGGCTGAGACCAGCTGTTGTTTGAGCACCTGAAATGTATTGTCAG
TGATGGGAGTCCAGAGAAACGAAACGCCCTTCTTGAGCAGGTTGAATAGAGGTCGTGCAA
TCACGCCGAAGTTCCTGACGAATCGGCGGTAGTAGACTGCAAGACCCAGGAAACTACGGA
CTCCCTGACATCCGTAGGTGTTGTCCAGTTGACCACTGCGGCAATCTTGGAAGGTTCGGT
GGACACGCCCTCTGTGCTAATGGTGTGGCCGAGATATGAGATCTGTTGTTTGACTGAAAG
CACACTTGCTGAGTTTGACATTCCATCTGTCCTAGCAGAGTAGTTGTAGGACTTGCCGCA
GATGAATGACGTGGTCCGACAAGGTTACGTTGAAAACCAAAATGTCGTCGAACAAGTGGA
ACACAAAGACACCGTTGAGGGGTTTGAGGGTTGTTGTCATTGCCCCCCGAATGTCGTTGG
TGCACCTGCGAGTCCGAAGGAGACCACCTTGAACTCGAAATGGCCTTGGTGGGTTTGAAA
GGCAGTTTTGTGTTCCTCTCACGGTGCGAGTCTGATTCTCAGGCCCTCAACAAACCGAGT
GAGAAAATAGAAAGGATGTAAGGAATCAGAATACGAATTCAAGTGATTGGTAATGAGTTC
AAATTTCTCTATGTAATCAGCCATGGTTTGGTAATGAGTTCAAATTTCTCTATGTAATCA
GCCACGGTTGACGATTGCCGCACTATGTACAACTGCCGAATCAGCATCTGATGGCGATCG
CGGCCGAACCTTGTGCACAGCAAGGTCATGAATGAGTCCCAATCGAACTCGCCCAAGCGG
TTCTGTATGGATTGCAACCAAATGGCTGCAGGACCGAGAAGTTGAGCGTTGCCATCGGGA
CCCAAAATGAAGTGATGCCAAACATGGAGAAATACTGCTCGCACGGCGTTTTCTAGAGGT
TTGGGTTCTCGCCCGCAAACTGCGGAAACGAGACAGAGGGATGTGCTTGGCCGAGGCCGG
CGAGCATCTGACTGGCGTGAGAGAACGGCGATAAAGGGATCACAGGAGAATGGGCTTCGA
GCTGACCTTTTGTCGGGAGCAGCGACGGTGTCACCAGGGACGCCGCCGCGGGCCCCATTG
CAGATGGATATCGTCGTGGCCATCGGGCCCGTGGGAACGCGTTGCCCCCACTTGATCAGC
CATCGCAGCGGGATCGGACCCCGGAAAGGTTGCCGGTCGCGCGAATTGCAGCTTCGTGAC
CGCTTCGCCCAGATCGGTGACGCGGCGCTCGAGATCGGGCCTCCAGGCGAGGAGATAGTC
GATTTCGGCCGTCGTGGTCTGCTAGGCCTTTGTGTTGGCTTCGATTGCGGCTTCGATCCT
GGTCTCGAACTGGCTGAGGAAGGCGGAGACGCTCGGATCCATGGCATCCAGCAACTCGCG
AGCTTGACGGAGCGCCCGCGTCTCGATCAGATGCGCCAGATCGAGGTGCAGGAAGCGGCA
AACTGGTCTCTGATACCAGATGATAGGGTATCAACACCGGAATTACTCGATCCACTGATA
TAGCTCACAAATTCGGTTCACAAGTAGCTATTAGAGGGGAGGATACACGAATTTGAAGGA
GGGGAATTGGGGGAGAGGAAGAACAGGTGAGGTAGCCGCCGTCGTTGCCGTGATCCACTG
GATGCCTTCTCCTCTCAGCGTCGCAGGTTAAGTAGCGAGCGCCCGAGCTTCAGTTGGCCC
ACGATGGCCCGTGGTAGCGCGGGTTGGGGTGCCTGGACCGTGCGGGCCGTTGGACAGTGT
GGGCCTGGGGGTCGTCGCTGCCTTGCGGGCCCCCTATGTCAGGTACGCTGACATAATATT
AGCTAGAAGGTATCTTCTATGGCATGGCTACGTGTGACTGGAAATACACAAATCCACAGG
AATCCCTAAGAAGTTGTACTTAATACCTCTGCACCAAAACGCCAGAATCTCTTTAATCAA
AGCAATAGCATTGGTATAAGGACATTTACGTCAGAACTTCCACTGGAAGTTTAACTAAGA
CAACTATGTCCAATATAAGACAATAATGAGATTGTAACATAACTAGTAAACTTGGGAAAC
CATAAATTATCAGAAAATGCACGCAAAGATAATTATCAAAGCCAGGTATCGCAGCAAACC
GTATATTCAAGGTTTGAGAAGGGTCTTTCGGCATCTCGTAGAACAAAAGGGCGGCCATTG
ATATAGATGACCTGTGTAACATTAGTGGAAAAACATGTATTACTAAATCTGATAACATGA
GAAGACATAACACAAGAGTTAGAGCATACATGGTATAACCTGTTCAAGAGACACTTCACT
GAAATTTCAAATTTAAGCAAGATGCAGCTAAAACCACAACAAATTTTGAAAAATACATAT
TGTTTAGACATGTGTCTAAGATAAACCAAAAAAATTGAAGTCAAAGGCCTCTATGGAAAA
GAGATAGAGATACGATTAACGGAATATATAGATTTTGTATAGATATTAAACATATAACAG
AAAATAGTCTCTATAATATGTATGGGAAACGCTTTAGCTCAGACGTCTGGAATCTCTCAA
TCATCAGACTCTTTTGTCGCCGTTGATTCTTTTTCCATCTCACGGTCCATAATCCTTGCA
TTTATTGTTCCAATAGATCGAATCACACCGCAAAAAACTCACGATCTCCACAAATCCCGC
ATCCCGTTCCTCCGCACCCGTTGCCCCCAATTCCTTCCTCCACTCCCATCGCAGTCGTCT
CCACTCCGATCCGATGATCTCCGTTCGTCACCGCGTTGCCGACGAGCCCTGCGGGCTTCT
TCTTTCAGTAGGCGAGCAGCGTGCTCTCATGGACGAGTCAGCACTCAGCAGGTATGGAAG
TAGCTCCCCATCTGCATGTAGCCGTAGCACCATCCAGTCCAGTGTGGTGCTCCCTTGAAG
CGATCATGGTGGTCTTCTTGGTGAGAAGCTCGCAGTTCTGTGTGTGATTTTGCTCCTCCA
TCCCATCTCCCTAATGCGCTGTCGTGAACCTAGTTGTCTGCTCAGACTCTCAAAAGTGAA
GCATCAACGACGTCCCTTCTTCCCAACTATGATATGAGCATCGCCAATCTGTATGAAATC
GGCCCTCATCTCTTCTCATCTCCCCTAGTTGATCCATTAATTTTCATCTCAATTTGGTAT
GTATAAATTTACTCAATCATCACTTTGCTGACTAATTTGGTTCTAATTTACATCTCCAAA
TTTGTATGCTTCCGATTGAGATCATTCATTTGAGATAGCATCGTTTTCTATGCTTCCAAT
TTTTATGCA