| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_137689
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6533 |
2 |
910 bp |
MLOC_6533.1 |
Available |
Available |
LOC_Os05g41080.2, FRAME:+3, EVALUE:1e-60, 13105.m04353 protein histone H3, putative, expressed |
| MLOC_6534 |
4 |
1996 bp |
MLOC_6534.2 |
Available |
Available |
LOC_Os05g41070.1, FRAME:-3, EVALUE:1e-134, 13105.m04352 protein bZIP transcription factor, putative, expressed |
CDS Structure of MLOC_6533
CDS Structure of MLOC_6534
Contig Sequence (10070 bp)
>contig_137689 10070 assembly3_WGSMorex_rbca.fasta
TCCCTCCCTCCCTCCTTCCTCCTAACCGACCCGCCGCCGTCGACAGCGATGGCCCGCACC
AAGCACCCCGCCGTGAGGAAGTCCAAGGCGCCGCCCAAGAAGAAGATCGGGTCCGCTAGC
TCCCCGAGCGCGGCGCAGCGCCGGCAGGAGACAGGTCAGCCCGTCCGTCCGTCGGCCCTT
CCTTGTTTGTTGCGGGCGTCATGCTAATGGCTTCTTCCTCTCCTTTGCAGATGGCGCCGG
CACGTCCGAGACTCCGGTGCGCGAGTCTTCCTTTTTTTTTTTGAGGGGATGCGAGTCTTC
CTTCGTTTCGTCTCGTCTCGTTTGGTGTTTTTTTCTTTTTGGGATCTGACTTGCTCCTCA
CCTGTTCGACGGAATGCAGAGGCGGGCCGGGCAGGGGCCGGCCCCAGCGGCGGCTGAAGG
TGCGACCTTCTTTTCGGTTTTACGGCGCGTGTTTAGTGCTAGTATTTAGATCTTGTTTGA
CAACTTGTAATTTCTCCCCACTTCCTTGTTGTGGACATTTCTTGAGAATGCTACCAGGAA
CAGTTTTCATGCTTTTCCTCCTGCTGTCCTTTGCCCTTAGGGATGGGTGGATCTGCAGTT
CTCTTCTCTTTCTTTGTCCACATCTTAGTTTGTCCAAACCAAGGCAAAGGACTTTGGTTT
ATCTTTTAGCAAGACGATGGATGATGGGACACGAAGTTCTCAGTTTTGGGATTGCCTTCT
TCCTATCACTTGTTATTTTCGTTTTCTGACTGACTCCAGTATCTATCTTTTCTTGGGGAA
GCAGGGGCACCTGGGGAACCGACGAAGAGGAAGCCACACCGGTTCAGGCCAGGCACGGTG
GCACTGCGGGAGATAAGGAAGTACCAGAAGTCGGTCAATTTTCTCATCCCGTTTGCACCG
TTTGTTCGTCTGGTGGGTATCCTCTCTGCACTTTCTATCAACCATCTCGAGTGCACACTG
TAAACTGGAATCTTTTGTTGCTAAAAAATTTGCAGGTCAGGGAGATCACCGAATACTACT
GCCCTCGAGTCAAACGCTGGACTCCCCAGGCGCTCCTCGCAGTTCAAGAGGTCAATGCTC
AGACCTGCCATGTACTATTAGATCTGATGGTTTGATTAGAGTACTATAATGCACATGAAT
GCAAGATACATTTATCGCCTTAATTCATACAGTAGTTTCTGAATGCTCTCGTATTAATTC
AGTTTGATATGATATACTATTTATTTAGCAGCATGGTATTATTTTGCTGGCTGGTAACTC
AAAACTGAAATGGGATTACGAGCAAAACGGTATCAATTGTCTTATTCTGTGTGTTGTGCA
CATCTGGTTGTTTCTTTACGATATACAAGTCTTGCAACATGATCCTGCCCGCACACTCAA
AACTCAACTATTGGTTAGATTCCATTTTGCTTATGGAATTTAGGATGTGTAACTGAGAGG
AGAGCAAGTGGTAGCAACCAGAGCTACGTTCAATTTTGATTCAGGAAGAGGATCGTGCGA
TCCAGAAAATTGCATGTTATGGTGATCGCCAAATCATTATCTCTATATCCAGTACATGCT
TATCTGTCCGAACCCCAAATGATTATCTCTATATCCAGTACAACAACATAAATACTTTAG
AACCATTCAAGTTTATTGTGCATTTATACAAGATTGTTATTTGCACAATAGACTTACTTT
AGTCGCCTCTTGCCAGAATTGCCTTCTGTACAACGAGCAAAATAACATAAAGTTGACTAA
GCCTCTTGCCAGAATTGCCTTCTTCTGCACAACGAGCAAATACTCCCTCTGTACCATAAC
ATAAAGTTGACTATACTAGTTGAATGTCCGAATTTTTCAGTCACTGGCCTGTGTATTTGC
TTTGAATTGACACATAATTCCCTTTTCCTTTCCCTCTGCAGGCTACAGAGTATCACCTCG
TCGACATATTTGAAAGGGCACATCTCTGTGCCATCCATGCAAAGCGTGTTACCGTCAGTA
AGTTGTCACTGAATGAAAACTTCCTTTCTTTTACAATATTATGCAGAAGGAAACATGCCA
GTTATGTAAGAGTTTCAATTACAGGATCGCCTTTGCTTTCATTTGAGGTGATATCTAGTT
TCGATGTTGTTTCAAGTTGCAAGAATTCTAACGATTAATGATAGGATCCACAATTGTTAT
ATCTCCGCAGCTCCTCGTATCTGTTGTCAATGAACATACATGTCAAACAAACAGTATATA
CACTGCATATTAGATATCAAACCTGGCTACTATAACAGGAAATTCAGGGTTGATTACCTT
TTTACTCCCTCCATCCGGAATTACTTGTCACGCAAATGAATAAAAATGGATGTATCTAAA
ACTAAAATACATCTAGATGCATCCATTCCTATGACAAGTATTTCCGGACGGAGGGAGTAT
TTCTTATCTGAAGGATAAACATTGTAGCACATTAGAATTTTATTTGTAAGTTACATTTTT
TGTTTCCTTATAAAACTGAGACACTCTTTTACTGTGACAAATACATGCCCCACTAGAATC
ATCATCATCATGGTTGTTGCTTCTATTCTAATAAATAAAAAGGATGCTCCTGAACAAATG
GAACTATATATGAAGATGTATAGACTAGCATGTTCATGTTAACCTGACTTTTTGTGTGCT
GCTACAGTGCAAAAGGACATACAGCTCGCAAGGCGTATCGGCGGGTCGAAGCTTTGGTGA
TACTAATGGAAGACGTGTTCTGCATCGTAGGGGGGCAAAGACTCTGGTGATACTAATGGG
AGATGTTTCATGTGTGGGTGGGTGTGGGGGGAGAGGTTTCATGTGTGGGTGGGTGGGTGT
GGGGTGATAGTGGTCCGATATGTTTGACTGCGTCGTTAGAAAGTATTGTAGGTGTATCTT
CATTTAGTTAGCTCTGTCTTCAAAGTTGATGTGATTCGTTACATTGTTGGTATCATTCGA
CTCTTTCATTCAGCAGTTGTTCCTGTTGAATTGATTGTGCACAAGTGTGGAACTATTTGC
TCACAACTTCCAAAGGTGCGACAATGATGATTACAAATTGATGCGCCAATACAATCGCTA
CTCGTATAGGAAGGAATTGGATGCCAATTTTTCACTGAGATATCTTTGCTAAAACAGAGG
TGTTTTGTCAGGTCACACACACGAAATGCTACTGTCCGGCAGAAACAGCAACGAAAAACA
CTTTCTTTGGGCATGTCCACATACCATATGACGAGGTAGAGACAGTAATAACTTATCATG
TGCTCCCTCCATACCAAAATTCTTATACTCCCTCTTTTCTTAAACAAGAATTTTGGGATG
GAGGTAGTATTAGATTTGTGTAGATACTGATGTATCTAGTCATGTTTAGTGTTAGATACA
TTCATATATGTCTATATACTTGTACTGTTAAACAAGCAAATTGTTTCTTTCTTAAAGCCA
CCCAGCAAATGTATCAAGCCTGATTAGCATCGCTAGATTAACCTCACTAATTAAGAGCAT
GTATAATGGTGCTATCTTAAGTGTCACATAGAATAAATAATGAGGTAGAGGAGAAATAAC
TCATAAAAATAGGGTTGTCTTTTTTTTATTTAAGAGAAGACAAGAGGAAGTGTGTTATCG
ACTAAAGGGAGGGTGAATAGGCGATTTTTATAATTTCATCACTGAGAAAATTCCAAGTGA
GAAAAGTCCTCAGTCATGAACTAAGTGCAGCGGAAGTAGAACCAAATTAGGGGCGCAAAA
ACGACTACAACAAAGTACCGAGCGAGATTTCAGAGATTCGTTTCGCACATGTCACAAGTA
CAGAATAAGCAGGTGAAAGTTAACTCAGGTGAAGTTGTGTTGTTAGGCCACTGGTTATAA
GTGACATTGTAAATTATTCATTAATTAATTGTTGTTTCTCCTAGAAGAAAAATATATGAC
ATGAATGGTCTGTCGTAATATTTGGAGAGCAACTTATATTATTATGGTGCGACGTCACCC
TCACTACGGTAGAATCGAAGCGTCACCCTCCCGTTTGGAGCAATGAAATATGGATACAGG
GAGCCACTATCTCGACAACAATGGGAGGGGCAAACTGTCGGCTCCATTTTCCCGTTACTG
GGAGAGTTAGGAGAGAGAATGAATCATGACTCTTTTGATGATACGTGCGCTCACCCTCCG
GTTTTAATTATAAGTTTTTTTTTAAATTTTTTAGTAAAAGACTACATTCGGATATATATA
AACATATTTTAAAGTATAGATTCACTTATTTTGCTTCATATGTAGTCTTTTAATAAAATC
TTTAAAAAGACTTATATTTTTTTTTAAGATTTATATTTAGAAACGGAGGGAGCAAAACAG
AGGTGTTCGCCAGGTCACACCCAACGCTACTGTCTGACAGAAACAGCAATGAAAAGACAC
TTTCTCTGGGCATGGCCACATAATGACCATATGATGAGATAAAGACAGTCATAACTTATC
ATATACAAAGAAGGAGCTCTGATAAAATTAAAACATGTACCTAGCAGATTTACACACACT
GACAAAGCCTCGGAACAGACAGATCATCTGGGACATGCTAGGGGTCGCCTAGGGCTGCTA
CTCATCTACAAACTCTGAACCACCGGGCTGGGATAAGCTACAACACCTCAGGCTACCAAC
TGTTTCTATCATAACCACGGAAAACATACGAGCAGTGTAATCTACAAAATTTACTATCGA
CCTCAAACGGGTGCAGAACTTGTTCTCCGGAGTTGATACTTGGGTTCTGGGGGAGGCGCA
GAGGTTATCATCATCTCCAACTCCTGAAATTATCATGAAACGGAAGGCATCAGACATGAC
ATGAACATAACATAATATAAGCTACTCCCTCCGATCTTAGCATCCAAAAGAAGTGTTGCT
GAATTGAAACAAGAGTCAATTACATCATGCTGACCTAAAACTATTCATAGCCACAAAGTA
ATGACTACTGTAATCTCGGTAGCATTGTGTTAAGCTAAAAAAAGAATATGATTACAACCT
CTGTTTTTGAGACGCCCGACTAGTCGATGAGTCACACTTCCAGGGTCGACTCAACCTCTC
GACTCGACTCTTGGGATGAGTCGAGCGACTCGAGCGACTCGAGCGACTAGTCACGACTAG
TCGTGGTTTCTGGGTCGAACAACTTATTTACAACTATTTGATAGATATGATTTATAGCAC
CAGCATCATATCTAGGTGATGTGGTGTTAAACTGATAAATGGCAGGCGCCCATTGCAAGG
CTCAAATGGAATTGCACTCAAAATACAGAAAACACAAGCATATGTGCTCTCTGTGGTTTT
CTTATACCCGGTCCTTTGTTGCTTCGCATGTGATTATGATTTAGTGAGTACAAACTCTAA
TGTATTCATTTCTAATGGTGATCTGTTTGTTAAGTGTGGTTCCTGTCAATGTTCATGGCA
TGTGTTTATGTTACTTTCATGAAGGACTGCAATCTGTATTGATGGATAACTCCAGGATTG
TCAATTGTATGAAGAACTGGGGCTTTCATTTTTTAAACTGTGTAATTGCAACCGGGGAAG
CAATTCTATAACAACGGTAACTTGCCAAGTATAGGGGCATGATTCAAACAAATGTTCATC
AAGATAACCCATGTATGTATTAAATTCTCAGCGTCAACTCAGCTCTTGGCCAAGCAAAGC
AAATAAAATCAGGGCGCAAGGCATCTTAATGAATAGCTACGCTACAGAGAAGGCCAATAA
AGTTCTATGAATCAACGGTGCAGTTCTAACCGCCTGTTAGAAATAATATGCACAGCTGAA
ATCACTCACATGGTTAACAAATACTCCCTCCGTTCTTAAATATAAGTCCTTTTAGAGATT
TTAATATGGACTACATACGGAGCAAAATGGATGAATCTACACTCTAAAATATGTNNNNAT
ACATCCGTATGTAGTCCGTACTGAAACCTCTAAAAAGACTTATATTTAGGAACGGAGGGA
GTAAGAAGCAACCGAAACAATTGAGTATAACATATCTGCTTTCAAAAATAAATAGGAGTA
TATGCACATATCAAGTCCACCATGCAAAACATTGACATGCTTAGCCTAAGTAAACTGGTC
AATTTAATGCAGTGGGATATATTCAATTGAATAGCATGCTCAATAACTTCATAAGAGTTT
CCTCTAAATTTGAATAAGCAGCGGTTCACTACAATGAATAGTGGAATGCTGTAGTTAGAT
ATCCTCCACCAAAAAGAAGGGGAGAAATGTAGCAGTGTTACAGGAACAGGAGACAAATTA
CCTTCTGCTTCTTCAACCTCTCGTTCTCCTCTTCTAGACGAGACACCTTGTTTTCGAGCT
CATTAGTGTAAGCCTGCCAAGCAGAATACAGTAGCTTATAGTTTTTTATAGAGTAAAATA
GTACCTAACGATATGCCTGCAATTTTAGACTAAAAATGTGACAGAAACATGGTTAAAAAA
GGCCACATTTTTGCCTAGGCCATAGCAAAGTGCCTAGCGCTTAATCTGCACATAATTGCA
CATACTTGTGCATGAGCGTGCGCTTTGGTCAGCAAAGAGCAAGGCGGTGGCAATACACAC
AATTAACGCCTAGCACTTTTTTTTAACTATGAGCAGAAATACATAAATCGACACACTCAA
CAATAACTTTGCATTAAGGTTGATACTGCAATCAGAATATTATAACAGGACCAGCAGCGG
AGATTGCTGCAGGGACCATGGCCCCCCAGCCTAGATTAAATACTTGAAGAAACTTTTAGA
GGGAGGTCAGATTAGGAAAAGCATATGCTTTTGGCCCCCCAAACATCCCTATTCTAGGTT
TAGCCCCCCCAAGACTTCTTGCCTAGCTCCGTCAGTGAAGAGGACCTAACTCGATACATA
GGAAAACAGAAGTAGACAGGAAAATAGAATTAAACCTGCTTCCTCGCTCTGGACCTTGCA
GCTGATTCCCTGTTTTTTATCATTCTTTTTTGCCTTCTTTCTACGACCTTATCAGGTATA
CCATCTGAGGCACCACGCTTGCGCCCAGGTGTCTGAGGATCAGAATGTGCATCGAGCATT
GGTGAAGTAATCTGGCCATCCGGGTAAATCGATTCCATGATAGCACCTGTAGCAACAGCC
AATGGCCGAGGACCCAAATGACCTGCCATGAAAGGACCTGCCATGCTGGGATGCTGGGGC
TCCAAAGTTTGCTGCTGGTACTGCTGTAACCAATGCGCTCCGGGGTTCAAACTGGGCGCA
GCAGCCGCAATTACACTGCTCCCAATTGCACCCATGTTAGCTGGCAAGTCCATGGAATCC
TTCAAATGCCCTTCAGCGACAACCCCAGCTTTCACCAGGAAATCCTCGAGTGTCATCTCC
CCAAACGTCGGCTGCCTCTCCCGCCTGCGCCGACTACCCTCCTCGCCACTTCTCTTGGGC
GAATCTTGGATGCCCTTCCACACCTCGTCCACGGTCTTCTTGCTCAGCTCCGGAGGCATC
GTGATGCTCCCCTGGCGATGCAGGCCCAGGGTCGGCTCAGACTGGCCGGCGACGCCACCG
ACAGGATCCATGCCTTCAGGAAACACGCTCTTGAGCAGCTCATCGAGGTTCATACTAAGC
AAAGGCTCTGTCAGCTGGCTCTGCACCTCATCAAGGGTGAGGCTGTACAGGGAGCCTTGC
CGCGCCAGGCCCTGCGGCTGCTCGCGCTGCCCCGGGCCTGCATAGCAGCCGGTGCCGCCG
CCTCCTGCCTGCGACTGCGACGCCATTGCCTGAATCATGAACCGATGCTCTCTTGAACAG
GTCGCCCCTATGGGGAACAAAGACCTCAGGAACAACGATGCCCAAAGCAGTCCCCTTTTC
CAGCCGCAGAGTCCCGGCCCAGATATCGCCGATCCCCAGATCCACAAGACCGCACGCAGT
CACAGGAGCAGGCACCCACGGACGAACCTCCTATATAGACAGTGGCACGTTTGCATCAGA
CAGAATCGCACAATCGTCCCCGGACAAGGTGACTTGGGAAGAAAAACACAAGCGCGAACA
AGAGGGACGCGCAAGGAATCCAATCCAACCTCGAATTTCCCTGGATACGACGTCGAGCAG
CGGATTCGAGGGTACTCCGGCGACCGGATCTCCGCTGCTCCGACTTTCGAGCTGGACTCC
CCGCAGAACTCAACGGGGCTCCCGCGCGGTTCCCGCCCGCCTGGCGCCGAATCAAGGCCC
CGCGTGGCGGTCAGAGCTGGCTGAGGCTAGCGCCTACCATTGGGGGAAGGGAGGAGGAGG
CGACGGTGGAGGCAGCCATGGTGGGAGTGGAAGTGGAGGAGAAGGAAAACCGTGGGCGAC
AGGGGGGCTGGGCCCAACGGGGGACGGAAATGGGCCTGGGTGATTCGGATAAAAAGTGCC
GCATTCGGGCGGGGCGTGTCGTGTTCCAGTTTGAGCTTCCAGCAAACACTGTGGTGCGGT
TTTGATCGATACAAAATTACAAAATGGAGCTGCTAGTACGATGTTCATGGGTTCAATTAA
AATGACTCAAATGCTTGCAGCGTAGCTTTTATTGCAATATAAGAAAAGGGTGTTACAACC
GGTGATGGTTTAATGAAAATAACTAGGGGACAATCCGTAAATTTCTTTCGGCATACGTCT
CCGGGTACAAAGACACCCACTACAATAAGTTACGCGGTAAGGACGTCTTCTCGCCTATGC
CACGTCGATTCTACTGAGCCAACGAAAAAAACTTAAACATGATGGCCCATTGATCCCTGC
TTTTTTCATCGCTCGCGCGCAAGCATCCCCTCCTTTACTCTCTCGCGAGCTCTCTCTCCC
CCCGCAACCCCCTCGCCGTCGTCGGCACCATCACCACCTACGCCAGCCGATTTCGACGAG
TCCCGGCGGCGGGTGGCACACCAACGACTTCCCCTCGCCCCGCTCCTTCCTCCCATCTGT
CCAAATCCGTCGATAGAGGCCTCCCACGCTCGCTGCTGACCCTTAGCCTTGGCTAGGGTT
TCGGGCACGGTGTCTGATGGGGTTGTCCATTAAGGATAGGGCCATGGACATGCATTTCAG
GGCCCTCCAAGGGCCCCACATAGTCATTAAAGTCCCAGGGCCATTGATGCTTCGCTCGGA
CAAACGAAGGCACTCGGATGACTTCCTCGCATTTAGACGCACACCGGCACTCGGACGAGG
CAAGGCATGGACGACGAAGGGTCTGCAACGGCTGCGAGACTTTACCTCTCACTTGAAGTG
TTTTAAAGCCTAGCGTTACCGGTAACAACTCTAGTTAAGGCAGCAGTTTCAAGTAACGCC
CGGAGTTACTCTCATTTAATGCCCTAGTTATGACGCTCGGTTGGTGATGGCGCCCTCTAT
ATAAGCCGCACCTGAGCTCCTGAACAAGGGTTAAGCACCCCGTGTATTCACACCCCCCAT
AAGCAAAACTAAGCCTCCGGGCTCGAGATGTAGGGTCTTTACCACTCCTGAGTGGGGCGT
GAACTCGTACATCTGAGTGTAACAACCGCACCGTAGCTAGACTCCGCCCCTCATTCGTAC
CCCTCGTACTATTGTCAGGTTCATTCCCTCGATAGTTGGCGCCCACCGTGGGGCTGCGCA
TCTAGCGAATTCTAGCGCAATTGGAGTTTTCATCCTTTTCGTCATCATGATGACACTCAG
CGGTGAGATCCTCTTCGGCTCTCTCAGCTTCACCGCAGACGATTCGGCGTGGCTGCAGGA
CGCGCTGTTGGACATCGACGCTCTACCCGCTCGAGGTGCTTCTCACTTTAGCGTGGTGTC
ACACGGAGTCCTGGTCCGGCAGCCGTCAGTGTTGTATCACTCGGCACCCTTGCGTCCCGC
TGCGGTCCGTCGGAAGCGCTTCAGGCGCACACGGCTGCAGCGTTGGATCATGCATGCGGT
GGCTCATCAAGCCACATCAAGGCAAGTGTCCATGCTCGATTCTGACGAGCCCATCGTGAG
CCTTTTCCCTTCATCAGGCGATGACTCGTCCGACTGCGAGAGCAGCAGAGATGCTGGGGG
GTCTCGATGGTCGACACGACCAGGGGAGGAGCTCCTGGTTTCTCTGCTTGAAATTCCGCG
GGCACGATTGAAAGGATGTGGATCTCGCCTAGAGGGGGGTGAATAGGTGC
