Contig Data
morexGenes
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Map Locations of contig_137680 (4647 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137680

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6529 1 2007 bp None Available Available None
MLOC_6528 1 3390 bp None Available Available LOC_Os09g15790.1, FRAME:+1, EVALUE:1e-83, 13109.m01498 protein ras-related protein, putative, expressed





CDS Structure of MLOC_6529






CDS Structure of MLOC_6528






Contig Sequence (4647 bp)

>contig_137680 4647 assembly3_WGSMorex_rbca.fasta
ATCAGATCGGTCTTTTGGTTGCATTGGCNNGAGCATGCACTTCTACATGGTATCAGAGCC
AAGAGGTCTTGAGTTCAAGACCCGGCTGGCGCAATTAAATTGCAGCCCACTTTCGGTCCA
CGTTTAGGCCTGAGTGAGCCACACGTGAGGGGGAGTGTTGACGTATAATGCGCTGCTTAG
TCTCTTCCATCAGATCGGTCTTTTGGTTGCATTGGCTAGAGCATGCACTTCTACAAAAAC
GAACCGTTTTTTTTTTTGTGGGAAGGTGTAGAATTGCCAGAATCACCACAATCGCTGCTT
CAGGATTCGCTTCGCTCGTAGTTCACTGTTTAGAATCGATTCTAGGAAGTTTGACAGGAA
TCCAGTGTGTTTGTTTGAGTTTTTGATTTTGAAAGATTAGAATCCGAGAATCAGAAGCTG
CAGCCCAAACAAAGGCCACCTAAGGCAAGCCCATAACTAGAAGCATCCGCAATCACCACT
GTTTCACCCAACCAACGGGACAGTGACCGAGCAAGGTCCTCCGAAACTAATGTCACTGGG
GAGACAACCTAGCTCGTGCATCTGCTCACTGGACGAAGCATGGTAATGGAAGGAGTGAAC
CACACCATCCCACGTGAGTTGGAACAGAAACCAATACTGCGGGCAGGAGAGCTAACACCC
ACACCTCGTGCCATGGAGGACAGGAAGAACAAGAGAAAGAAAGAAGAACATGCAACGATA
ATGCTGCCAGGCAGAGGATAAAAGGGCAAATAAACTCCTAGATCGCAATCTAAAGAAGGA
TTTTTTTTTCCAGAAGAGTAGTAATTCAGCGTGGAACCCAAGGGGTCAAAGGCAGCGTTG
TGCCGTATCAGGCCCGAGGGAAGCAGAAGCGCATTGTCAAATCAATCGCGTCCCAGCATG
AGGCCACATTACATGATCACCCGCAGTTGTCACTGGTCCGGCACACCAAAGCGCGTCCCT
GCAACAGGTGGACCCTTGAGGAATTCTCAGCCGTTGAAGAACATGAACAGTCAAGCACAG
GACAGGGACCAAGATCAACTCTGCATCTCCAACGAGCAAGAGGCAACATCTGTGACAAAG
TAGCAGCATCCGTTGAAGACTGCGAGTATCTATGTCAACCTTACTCACGGATCCAGCTCC
ATTACGAATACCGATGGGGGGCATGCCAATGGTAAGTGGAATTACCTATGGTCTGGCTCC
TTAACACCGTATCAACTGGACCCACTAAATCTACCCTCGTGCGCTCTCCCCTTGCCGCCG
TTGGCCGGCCTTGCCGGCGCAAAGGCCTAGGCGATACCCGGCAGCGGCTGGGTCTCTCTT
CCTCACACGCTAGTGTCCTTTCTTCCTATGGATCATCTCGGTTGTTGCCGCCACTGCTGT
CGTTTTGCTGTTGGCCTTCGCTCCAAACCATCACCTGGACCCACTAAATCTACAGACAAG
TTATCATACCAAGGAGAAGCTCCACCCACCACGGAGGAGACTTTTCATCCGAGTACAAAA
CATCAAAGGAAAGCTCTCTACGACGTAGGGAAGGCTATATGTGTTGTAAACCAACACCAG
TCCGACTCCTGCCCCTATATGCCGTACACACCGACATGAAGCCATCCATACCGCTATATA
AGGGGCAACAGAGGCAATGTAGAAGGGGATCCACTCCTTTTCCACCTAGTGCCTAGACAC
TACATAGAAGATTTCTGGCGCTTCCTGCCAAAATCACCAACAGCTTGCCGAATTTCCTAA
CTCGACGGGTAGACCGTGATATTTTAGTCCTCGATATTCTTCATATATAACAAAAGAGCA
AGACATGAAGTTAGGCTTTTACCCAGCTTGGGTGTCTGAACCTGTGTAAATGGTCTGCCC
CCTTTACCTGTGTACTAGATCTACTGGTATCCCGACGTCTCCTCGACGACAAATCACATG
TACTAGTTCTAGCACGATGTTAAGACCCGACGAATATTCCTTGACATTAATATTAATTAT
TTTTGCCATGAACTGAAGTGAGTAATGGTGTTGGCTTGTCTCTTGAAACATAAATGTTAA
TGCATTCTACTGCCTCAACTTAATAGCTTATAATCCTTAGTTGTTGTCTCTTTGGAGCAA
TATTGATATCCAAGCCTTTACAGCCATATGTTGTATGTATCTGCTACCTGATTATTGTTT
CTGTTAGACTTGTCTGAACTCTGAATTTACATCCATAATATATATGCACATTCCTTTTTT
AGTGCAATAAAAGGGTTTTCCCTTTTATTTTTTCTTCAATACTGGCCCCCAATCAAGTGC
TAATTTGGGCAGTTGGCATTTCATCCTCGGTAGAAAGTGGACATAATGGTTTGTACCCTT
TTTACAAGGATTGTTGTGATTATTTATATTGATTTTTTACCCTTTGAAGCATTGGTTGTA
TCTCAGTTCTTGTATTGTACTCCCTCCGTCCGGTGAAGTATGTACGTTTGGTCTTAAAAT
TTGTTCACAAAAGACTGTACTTTTATCTTTCCAATACACTTTAAAGTAGGAAGAAATGCT
TTTCTCTCATCACACGGTAATCAAGACCAATAACATTCTACACATTGTCTCTTTAATTTC
TACATGCACTTAGCTCATTGGGGGTTGGATAATTAAACAGGATAGAGATGGTGGCTTGCA
TCTTTCCAATGCATTTTTTACTCCACTTCATAATTTGTCCTAAAATATCTATATGTACAC
TTTTCACCGGACGGAGGGAGTAATTGCCAATTGTTAAGGCATTATGTGCTGAAGTCAATG
TATCATCCTATCTGAAGTAAAGTTTTTATAAAGAACTGTTCTTGAGAATGGACGTTTGGA
GGCCGAGTTCCATGGTGGCCGAAATTTTTGAAAAATTCAAAATTCAAAATTCAAACTTTT
CAGTTTCAAAAAACTCTGAAAAACATATGCAAGTAAGGAAGGATGTTATGTGTATGTGTG
TAAAATTTTAGGATGAAATACCTTGAAATACGATCTGCAAAAAAATAAATCATGGCCTGG
AACGATGAATAGTATCATGTGTTAAAAAGCCTTAGATTTGTCTTTTTTTACAGTCCTTAT
GTCAACGTATTTTTTTCTAAAATTTACACACATGTGTTACGCCTTCACTTGTCTCTGTAT
TTTTTTTCAGAAATTTTTGAAATGTAAAAATATGAATTTTCATGAAATTTGAATTTCAAA
TTTAAAGGCCTCCATGGAGGCCGAGTTCCAAAAGCAATTTCCAACTGTTCTTTTCTTATA
AAAGACCAACTACTGATTGTGAAGTTTTTTGTAATATGGTTGCAACATTGCTAACATTTC
AATTGCATAACATATAATTTCCAGATATCGAGCAATTACAAGTGCATATTACAGAGGAGC
TGTGGGTGCGCTTGTTGTGTATGATGTGACACGTCATGTTACCTTCGAGAATGTGGAGAG
GTGGCTGAAGGAGCTCAAGGACCATACCGATGCCAACATTGTGATTATGCTAGTCGGCAA
CAAGGCCGACCTGCGCCACTTGCGGGCTGTCTCTGTAGAGGATGCCAAGGCATTTGCGGA
GAGGGAATACACCTTTTTCATGGAAACCTCTGCCCTTGAGGCCATGAATGTGGAGGACGC
TTTCACTGAGGTGTTAACCCAGATCTACCGAGTGGTCAGCAAGAAAGCTCTTGACATCGG
GGACGACCCTGCGGCTCCACCGCGAGGGCAGACCATCAACGTAGGGTCCAAAGACGATGT
CTCTGCCGTAAAGAAGGCTGGATGCTGCTCATCCTAATCCGTATTGACCTTGAAAAGTAT
ACCGGGCCCTTGTTTTATCATTGATGATGGATGGGTAGCTGTGTCTTGGGCGTGCTTTTG
GAGCCCCAAAATTAACCCAGGGGGTTGGAAACGATATAAAACACTAACAGTAATAGAATC
AACAGCCGTTTTTTGGAGGCAGTCATGGTATCCTAATTGTTGCAGTCTTGTTTCATATCG
GACGCCAAGGATCCCTTCCACAATCGATTATGTATCCTATTATATGTTCACCCTTTTCTC
CTTTCTTTTGAGAACTCTTGTTGTCTTGTTTGTATGATTCTTCACAATTTTGCTAATCAG
TGACATAATATAAACTTTATGTAGGAATACTATTATTACCCGTCACCTGACTCCGGCTAT
TTTTTTCCCTGCACGAGTCGGTTTGACTGAAGGCAGGCAAGGCAGGCACTATCTCGAGTG
GTAAAAGAAATTCACAATTTACCAGTAAAATCCATCTATACTACTATTAAACAAGCAAAC
TAAAACTTTTTTAAATTTACCAATAAAATCCATCTATACTACTATTAAACAAGCAAACTA
AAACTTTTTTAAAACCACCCGATAGATGTACCCGGCCTAACTTTCACTGTTAGATTAGCC
CTTCTGAATAATATCTAATGGTTACAATTAATTTAATCCCGAGCTATGTGTGCAATTAGG
AATTTAGTAGGACTGAACGCACTCCACCCGCAGAGAAATATTCCACGTGCATCCGTGTAC
AACGCTTCGTCAACACAAAAGGGCTTTCCAAATCGCAACCATCACATTGCCTCCATACGT
CTCGGGGGAGAACCCTAGCCGCCATTCCTTCCCTCCCCTGCCTCTTCCCGCCTCCCCGTC
GCTGGAGGGAGTCCCGGGGGAAAGCTC